RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 GAS8-AS1O95177 125 aa10.04□□□□□ -0.8
CCDC187-201ENST00000563590 EFNA4P52798 201 aa10.04□□□□□ -0.8
CCDC187-201ENST00000563590 EMP1P54849 157 aa10.04□□□□□ -0.8
CCDC187-201ENST00000563590 FOXI2Q6ZQN5 318 aa10.04□□□□□ -0.8
CCDC187-201ENST00000563590 TMEM167AQ8TBQ9 72 aa10.04□□□□□ -0.8
CCDC187-201ENST00000563590 A0A0G2JNJ9 132 aa10.04□□□□□ -0.8
CCDC187-201ENST00000563590 PRTN3P24158 256 aa10.04□□□□□ -0.8
CCDC187-201ENST00000563590 KLRD1Q13241 179 aa10.04□□□□□ -0.8
CCDC187-201ENST00000563590 PLSCR4Q9NRQ2 329 aa10.04□□□□□ -0.8
CCDC187-201ENST00000563590 Q9UFV3 132 aa10.04□□□□□ -0.8
CCDC187-201ENST00000563590 A0A096LNJ9 63 aa10.04□□□□□ -0.8
CCDC187-201ENST00000563590 C1orf122Q6ZSJ8 110 aa10.04□□□□□ -0.8
CCDC187-201ENST00000563590 B5MCH6 92 aa10.03□□□□□ -0.8
CCDC187-201ENST00000563590 IGHG3P01860 377 aa10.03□□□□□ -0.8
CCDC187-201ENST00000563590 THAP8Q8NA92 274 aa10.03□□□□□ -0.8
CCDC187-201ENST00000563590 MSRB2Q9Y3D2 182 aa10.03□□□□□ -0.8
CCDC187-201ENST00000563590 HOXA3O43365 443 aaPredicted RBP10.03□□□□□ -0.8
CCDC187-201ENST00000563590 SPRY2O43597 315 aa10.03□□□□□ -0.8
CCDC187-201ENST00000563590 Q1RN00 199 aa10.03□□□□□ -0.8
CCDC187-201ENST00000563590 TMEM200BQ69YZ2 307 aa10.03□□□□□ -0.8
CCDC187-201ENST00000563590 C1orf162Q8NEQ5 155 aaPredicted RBP10.03□□□□□ -0.8
CCDC187-201ENST00000563590 TRGV9Q99603 122 aa10.03□□□□□ -0.8
CCDC187-201ENST00000563590 HIVEP2P31629 2446 aa10.03□□□□□ -0.8
CCDC187-201ENST00000563590 MT-ATP8P03928 68 aa10.03□□□□□ -0.8
CCDC187-201ENST00000563590 SPANXN1Q5VSR9 72 aa10.03□□□□□ -0.8
CCDC187-201ENST00000563590 ACANP16112 2415 aa10.02□□□□□ -0.8
CCDC187-201ENST00000563590 LINC01549A6NIU2 74 aa10.02□□□□□ -0.8
CCDC187-201ENST00000563590 HLA-DMBP28068 263 aa10.02□□□□□ -0.8
CCDC187-201ENST00000563590 ZNF48Q96MX3 618 aaPredicted RBP10.02□□□□□ -0.8
CCDC187-201ENST00000563590 BEX4Q9NWD9 120 aaPredicted RBP10.02□□□□□ -0.8
CCDC187-201ENST00000563590 C17orf100A8MU93 164 aa10.02□□□□□ -0.81
CCDC187-201ENST00000563590 TNFRSF6BO95407 300 aa10.02□□□□□ -0.81
CCDC187-201ENST00000563590 Q6AWC8 147 aa10.02□□□□□ -0.81
CCDC187-201ENST00000563590 ZNF833PQ6ZTB9 187 aa10.02□□□□□ -0.81
CCDC187-201ENST00000563590 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.02□□□□□ -0.81
CCDC187-201ENST00000563590 A0A1B0GW15 77 aa10.02□□□□□ -0.81
CCDC187-201ENST00000563590 SIVA1O15304 175 aa10.02□□□□□ -0.81
CCDC187-201ENST00000563590 CD3EP07766 207 aa10.02□□□□□ -0.81
CCDC187-201ENST00000563590 CRIP1P50238 77 aa10.02□□□□□ -0.81
CCDC187-201ENST00000563590 PIP4P2Q8N4L2 257 aa10.02□□□□□ -0.81
CCDC187-201ENST00000563590 MAPKAPK5-AS1Q8N8E1 139 aa10.02□□□□□ -0.81
CCDC187-201ENST00000563590 RNF183Q96D59 192 aa10.02□□□□□ -0.81
CCDC187-201ENST00000563590 RNF125Q96EQ8 232 aa10.02□□□□□ -0.81
CCDC187-201ENST00000563590 ECSCRQ19T08 205 aa10.01□□□□□ -0.81
CCDC187-201ENST00000563590 LINC00312Q9Y6C7 94 aa10.01□□□□□ -0.81
CCDC187-201ENST00000563590 JMJD1CQ15652 2540 aa10.01□□□□□ -0.81
CCDC187-201ENST00000563590 TRBV19A0A075B6N1 114 aa10.01□□□□□ -0.81
CCDC187-201ENST00000563590 K7ENP7 123 aa10.01□□□□□ -0.81
CCDC187-201ENST00000563590 TRBV20-1A0A075B6N2 111 aa10□□□□□ -0.81
CCDC187-201ENST00000563590 EGR2P11161 476 aaPredicted RBP10□□□□□ -0.81
CCDC187-201ENST00000563590 ERCC8Q13216 396 aa10□□□□□ -0.81
CCDC187-201ENST00000563590 ADIPOQQ15848 244 aa10□□□□□ -0.81
CCDC187-201ENST00000563590 FAM57AQ8TBR7 257 aa10□□□□□ -0.81
CCDC187-201ENST00000563590 MGPP08493 103 aa10□□□□□ -0.81
CCDC187-201ENST00000563590 HLA-DRB4P13762 266 aa10□□□□□ -0.81
CCDC187-201ENST00000563590 ODF1Q14990 250 aa10□□□□□ -0.81
CCDC187-201ENST00000563590 C8orf86Q6ZUL3 223 aa10□□□□□ -0.81
CCDC187-201ENST00000563590 PPP1R27Q86WC6 154 aa10□□□□□ -0.81
CCDC187-201ENST00000563590 UBTD1Q9HAC8 227 aa10□□□□□ -0.81
CCDC187-201ENST00000563590 HLA-DRB4X5D2U9 266 aa10□□□□□ -0.81
CCDC187-201ENST00000563590 SCGB1A1P11684 91 aa9.99□□□□□ -0.81
CCDC187-201ENST00000563590 IGFL2Q6UWQ7 119 aa9.99□□□□□ -0.81
CCDC187-201ENST00000563590 TRAV8-2A0A0B4J237 113 aa9.99□□□□□ -0.81
CCDC187-201ENST00000563590 PRSS29PA6NIE9 313 aa9.99□□□□□ -0.81
CCDC187-201ENST00000563590 ZNF815PA8K554 130 aa9.99□□□□□ -0.81
CCDC187-201ENST00000563590 OVOL3O00110 214 aa9.99□□□□□ -0.81
CCDC187-201ENST00000563590 GATA3P23771 443 aa9.99□□□□□ -0.81
CCDC187-201ENST00000563590 S100A4P26447 101 aaKnown RBP9.99□□□□□ -0.81
CCDC187-201ENST00000563590 COL27A1Q8IZC6 1860 aaPredicted RBP9.99□□□□□ -0.81
CCDC187-201ENST00000563590 ZNF562Q6V9R5 426 aa9.99□□□□□ -0.81
CCDC187-201ENST00000563590 TEX29Q8N6K0 151 aa9.99□□□□□ -0.81
CCDC187-201ENST00000563590 SPENQ96T58 3664 aaKnown RBP9.98□□□□□ -0.81
CCDC187-201ENST00000563590 INS-IGF2F8WCM5 200 aa9.98□□□□□ -0.81
CCDC187-201ENST00000563590 M0R381 172 aa9.98□□□□□ -0.81
CCDC187-201ENST00000563590 UCNP55089 124 aa9.98□□□□□ -0.81
CCDC187-201ENST00000563590 RRN3P1Q2M238 152 aa9.98□□□□□ -0.81
CCDC187-201ENST00000563590 SCGB3A1Q96QR1 104 aa9.98□□□□□ -0.81
CCDC187-201ENST00000563590 LINC00574Q9H8X3 128 aa9.98□□□□□ -0.81
CCDC187-201ENST00000563590 IGLV2-23P01705 113 aa9.98□□□□□ -0.81
CCDC187-201ENST00000563590 IGLV2-11P01706 119 aa9.98□□□□□ -0.81
CCDC187-201ENST00000563590 RAI1Q7Z5J4 1906 aaPredicted RBP9.98□□□□□ -0.81
CCDC187-201ENST00000563590 PKD1L2Q7Z442 2459 aa9.98□□□□□ -0.81
CCDC187-201ENST00000563590 ATP5LO75964 103 aa9.98□□□□□ -0.81
CCDC187-201ENST00000563590 IGFL3Q6UXB1 125 aa9.98□□□□□ -0.81
CCDC187-201ENST00000563590 DLX4Q92988 240 aaPredicted RBP9.98□□□□□ -0.81
CCDC187-201ENST00000563590 NXT2Q9NPJ8 142 aaKnown RBP9.98□□□□□ -0.81
CCDC187-201ENST00000563590 E9PLD3 99 aa9.97□□□□□ -0.81
CCDC187-201ENST00000563590 TTC32Q5I0X7 151 aa9.97□□□□□ -0.81
CCDC187-201ENST00000563590 DPF1Q92782 380 aa9.97□□□□□ -0.81
CCDC187-201ENST00000563590 RNASE6Q93091 150 aaKnown RBP9.97□□□□□ -0.81
CCDC187-201ENST00000563590 CEACAM4O75871 244 aa9.96□□□□□ -0.81
CCDC187-201ENST00000563590 IGF2-ASQ6U949 168 aa9.96□□□□□ -0.81
CCDC187-201ENST00000563590 ZFP2Q6ZN57 461 aa9.96□□□□□ -0.81
CCDC187-201ENST00000563590 RAX2Q96IS3 184 aa9.96□□□□□ -0.81
CCDC187-201ENST00000563590 FOXI1Q12951 378 aa9.96□□□□□ -0.81
CCDC187-201ENST00000563590 SIGLEC15Q6ZMC9 328 aa9.96□□□□□ -0.81
CCDC187-201ENST00000563590 C3orf56Q8N813 242 aa9.96□□□□□ -0.81
CCDC187-201ENST00000563590 SVIPQ8NHG7 77 aa9.96□□□□□ -0.81
CCDC187-201ENST00000563590 CRYGCP07315 174 aa9.96□□□□□ -0.82
CCDC187-201ENST00000563590 GATA4P43694 442 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms