RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 C1orf158Q8N1D5 194 aa13.67□□□□□ -0.22
RAB40C-207ENST00000563109 C2CD4CQ8TF44 421 aa13.67□□□□□ -0.22
RAB40C-207ENST00000563109 KLF12Q9Y4X4 402 aa13.67□□□□□ -0.22
RAB40C-207ENST00000563109 TRBV6-1A0A0K0K1D8 114 aa13.66□□□□□ -0.22
RAB40C-207ENST00000563109 LINC01587Q99440 93 aa13.66□□□□□ -0.22
RAB40C-207ENST00000563109 H7BYZ3 331 aa13.65□□□□□ -0.22
RAB40C-207ENST00000563109 MIFP14174 115 aa13.65□□□□□ -0.22
RAB40C-207ENST00000563109 SMUG1Q53HV7 270 aa13.65□□□□□ -0.22
RAB40C-207ENST00000563109 PRR9Q5T870 116 aa13.65□□□□□ -0.22
RAB40C-207ENST00000563109 NEU1Q99519 415 aa13.65□□□□□ -0.22
RAB40C-207ENST00000563109 MED9Q9NWA0 146 aa13.65□□□□□ -0.22
RAB40C-207ENST00000563109 ZFP30Q9Y2G7 519 aa13.65□□□□□ -0.22
RAB40C-207ENST00000563109 SMIM9A6NGZ8 99 aa13.64□□□□□ -0.23
RAB40C-207ENST00000563109 RBMY1A1P0DJD3 496 aaKnown RBP13.64□□□□□ -0.23
RAB40C-207ENST00000563109 RBMY1CP0DJD4 496 aa13.64□□□□□ -0.23
RAB40C-207ENST00000563109 RPL35P42766 123 aaKnown RBP13.64□□□□□ -0.23
RAB40C-207ENST00000563109 RBMY1FQ15415 496 aaKnown RBP13.64□□□□□ -0.23
RAB40C-207ENST00000563109 CLLU1Q5K131 121 aa13.64□□□□□ -0.23
RAB40C-207ENST00000563109 TVP23CQ96ET8 276 aa13.64□□□□□ -0.23
RAB40C-207ENST00000563109 C8orf49Q96NF6 230 aa13.64□□□□□ -0.23
RAB40C-207ENST00000563109 X6R8D5 127 aa13.64□□□□□ -0.23
RAB40C-207ENST00000563109 TRAV21A0A0B4J279 112 aa13.63□□□□□ -0.23
RAB40C-207ENST00000563109 LTAP01374 205 aa13.63□□□□□ -0.23
RAB40C-207ENST00000563109 TAS2R60P59551 318 aa13.63□□□□□ -0.23
RAB40C-207ENST00000563109 RRN3P1Q2M238 152 aa13.63□□□□□ -0.23
RAB40C-207ENST00000563109 PYGO2Q9BRQ0 406 aa13.63□□□□□ -0.23
RAB40C-207ENST00000563109 DNAH9Q9NYC9 4486 aa13.62□□□□□ -0.23
RAB40C-207ENST00000563109 TMEM250H0YL14 139 aa13.62□□□□□ -0.23
RAB40C-207ENST00000563109 RGS13O14921 159 aa13.62□□□□□ -0.23
RAB40C-207ENST00000563109 NDUFS6O75380 124 aaKnown RBP13.62□□□□□ -0.23
RAB40C-207ENST00000563109 GCGP01275 180 aa13.62□□□□□ -0.23
RAB40C-207ENST00000563109 Q6AWC8 147 aa13.62□□□□□ -0.23
RAB40C-207ENST00000563109 DERL1Q9BUN8 251 aa13.62□□□□□ -0.23
RAB40C-207ENST00000563109 IGHV4-28A0A0C4DH34 117 aa13.61□□□□□ -0.23
RAB40C-207ENST00000563109 ZNF324O75467 553 aaPredicted RBP13.61□□□□□ -0.23
RAB40C-207ENST00000563109 HTN1P15515 57 aa13.61□□□□□ -0.23
RAB40C-207ENST00000563109 PEA15Q15121 130 aa13.61□□□□□ -0.23
RAB40C-207ENST00000563109 BAGE2Q86Y30 109 aa13.61□□□□□ -0.23
RAB40C-207ENST00000563109 ZNF705GA8MUZ8 300 aaPredicted RBP13.6□□□□□ -0.23
RAB40C-207ENST00000563109 GNG4P50150 75 aa13.6□□□□□ -0.23
RAB40C-207ENST00000563109 CEBPGP53567 150 aa13.6□□□□□ -0.23
RAB40C-207ENST00000563109 CENPWQ5EE01 88 aa13.6□□□□□ -0.23
RAB40C-207ENST00000563109 TMEM183AQ8IXX5 376 aa13.6□□□□□ -0.23
RAB40C-207ENST00000563109 Q8NAQ8 132 aa13.6□□□□□ -0.23
RAB40C-207ENST00000563109 C11orf68Q9H3H3 251 aaKnown RBP13.6□□□□□ -0.23
RAB40C-207ENST00000563109 TMEM189A5PLL7 270 aa13.59□□□□□ -0.23
RAB40C-207ENST00000563109 PFN1P07737 140 aaKnown RBP13.59□□□□□ -0.23
RAB40C-207ENST00000563109 ZNF674Q2M3X9 581 aa13.59□□□□□ -0.23
RAB40C-207ENST00000563109 SMDT1Q9H4I9 107 aa13.59□□□□□ -0.23
RAB40C-207ENST00000563109 NAGKQ9UJ70 344 aa13.59□□□□□ -0.23
RAB40C-207ENST00000563109 IGHV1OR15-1A0A075B7D0 117 aa13.58□□□□□ -0.24
RAB40C-207ENST00000563109 A0A0J9YWU9 116 aa13.58□□□□□ -0.24
RAB40C-207ENST00000563109 CBY3A6NI87 242 aa13.58□□□□□ -0.24
RAB40C-207ENST00000563109 FAM159AQ6UWV7 190 aa13.58□□□□□ -0.24
RAB40C-207ENST00000563109 COX8CQ7Z4L0 72 aa13.58□□□□□ -0.24
RAB40C-207ENST00000563109 EIF4E3Q8N5X7 224 aaKnown RBP13.58□□□□□ -0.24
RAB40C-207ENST00000563109 NHLRC2Q8NBF2 726 aa13.58□□□□□ -0.24
RAB40C-207ENST00000563109 C16orf74Q96GX8 76 aa13.58□□□□□ -0.24
RAB40C-207ENST00000563109 ZC2HC1AQ96GY0 325 aa13.58□□□□□ -0.24
RAB40C-207ENST00000563109 LINC00467Q9BRT7 94 aa13.58□□□□□ -0.24
RAB40C-207ENST00000563109 PARLQ9H300 379 aa13.58□□□□□ -0.24
RAB40C-207ENST00000563109 DEFB4AO15263 64 aa13.57□□□□□ -0.24
RAB40C-207ENST00000563109 SRP19P09132 144 aaKnown RBP13.57□□□□□ -0.24
RAB40C-207ENST00000563109 ZNF80P51504 273 aaPredicted RBP13.57□□□□□ -0.24
RAB40C-207ENST00000563109 MUC21Q5SSG8 566 aa13.57□□□□□ -0.24
RAB40C-207ENST00000563109 FAM162BQ5T6X4 162 aa13.57□□□□□ -0.24
RAB40C-207ENST00000563109 ZNF493Q6ZR52 646 aa13.57□□□□□ -0.24
RAB40C-207ENST00000563109 TMEM263Q8WUH6 116 aaKnown RBP13.57□□□□□ -0.24
RAB40C-207ENST00000563109 SMIM12Q96EX1 92 aa13.57□□□□□ -0.24
RAB40C-207ENST00000563109 HUWE1Q7Z6Z7 4374 aaKnown RBP13.57□□□□□ -0.24
RAB40C-207ENST00000563109 RAB19A4D1S5 217 aa13.56□□□□□ -0.24
RAB40C-207ENST00000563109 FABP5P3A8MUU1 101 aa13.56□□□□□ -0.24
RAB40C-207ENST00000563109 Q6ZQT7 251 aa13.56□□□□□ -0.24
RAB40C-207ENST00000563109 NBEAL2Q6ZNJ1 2754 aa13.56□□□□□ -0.24
RAB40C-207ENST00000563109 C9JCJ5 164 aa13.55□□□□□ -0.24
RAB40C-207ENST00000563109 MGST1P10620 155 aaKnown RBP13.55□□□□□ -0.24
RAB40C-207ENST00000563109 EMP1P54849 157 aa13.55□□□□□ -0.24
RAB40C-207ENST00000563109 ANXA2RQ3ZCQ2 193 aa13.55□□□□□ -0.24
RAB40C-207ENST00000563109 KCNS1Q96KK3 526 aa13.55□□□□□ -0.24
RAB40C-207ENST00000563109 MLST8Q9BVC4 326 aa13.55□□□□□ -0.24
RAB40C-207ENST00000563109 SDF2L1Q9HCN8 221 aa13.55□□□□□ -0.24
RAB40C-207ENST00000563109 BIN3Q9NQY0 253 aa13.55□□□□□ -0.24
RAB40C-207ENST00000563109 TRGV11A0A075B6L2 103 aa13.54□□□□□ -0.24
RAB40C-207ENST00000563109 SH2D1AO60880 128 aa13.54□□□□□ -0.24
RAB40C-207ENST00000563109 PRM2P04554 102 aa13.54□□□□□ -0.24
RAB40C-207ENST00000563109 AZU1P20160 251 aa13.54□□□□□ -0.24
RAB40C-207ENST00000563109 PRR27Q6MZM9 219 aa13.54□□□□□ -0.24
RAB40C-207ENST00000563109 RNASE8Q8TDE3 154 aaKnown RBP13.54□□□□□ -0.24
RAB40C-207ENST00000563109 SMIM7Q9BQ49 75 aa13.54□□□□□ -0.24
RAB40C-207ENST00000563109 COL7A1Q02388 2944 aa13.53□□□□□ -0.24
RAB40C-207ENST00000563109 TEX48A0A1B0GUV7 120 aa13.53□□□□□ -0.24
RAB40C-207ENST00000563109 ZNF727A8MUV8 499 aa13.53□□□□□ -0.24
RAB40C-207ENST00000563109 SNURFLB1AK76 121 aa13.53□□□□□ -0.24
RAB40C-207ENST00000563109 SRSF3P84103 164 aaKnown RBP13.53□□□□□ -0.24
RAB40C-207ENST00000563109 TDRG1Q3Y452 100 aa13.53□□□□□ -0.24
RAB40C-207ENST00000563109 EDA2RQ9HAV5 297 aa13.53□□□□□ -0.24
RAB40C-207ENST00000563109 TENM3Q9P273 2699 aa13.53□□□□□ -0.24
RAB40C-207ENST00000563109 TRBV20OR9-2A0A075B6H5 130 aa13.52□□□□□ -0.25
RAB40C-207ENST00000563109 ORM1P02763 201 aa13.52□□□□□ -0.25
RAB40C-207ENST00000563109 ZNF415Q09FC8 603 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms