RNA–Protein interactions for RNA: ENST00000562874.2

SF3B3-203, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-203ENST00000562874 SCGB1C1Q8TD33 95 aa10.89□□□□□ -0.67
SF3B3-203ENST00000562874 Q9H8V8 135 aa10.89□□□□□ -0.67
SF3B3-203ENST00000562874 SPINK4O60575 86 aa10.88□□□□□ -0.67
SF3B3-203ENST00000562874 RAB2AP61019 212 aa10.88□□□□□ -0.67
SF3B3-203ENST00000562874 HYLS1Q96M11 299 aa10.88□□□□□ -0.67
SF3B3-203ENST00000562874 ALG5Q9Y673 324 aa10.88□□□□□ -0.67
SF3B3-203ENST00000562874 A0A096LPF7 62 aa10.87□□□□□ -0.67
SF3B3-203ENST00000562874 HMGB3O15347 200 aaKnown RBP10.87□□□□□ -0.67
SF3B3-203ENST00000562874 CSN1S1P47710 185 aa10.87□□□□□ -0.67
SF3B3-203ENST00000562874 ZNF415Q09FC8 603 aa10.87□□□□□ -0.67
SF3B3-203ENST00000562874 IBA57Q5T440 356 aaKnown RBP10.87□□□□□ -0.67
SF3B3-203ENST00000562874 MRPS16Q9Y3D3 137 aaKnown RBP10.87□□□□□ -0.67
SF3B3-203ENST00000562874 DIRC3C9JPN6 131 aa10.86□□□□□ -0.67
SF3B3-203ENST00000562874 NMBP08949 121 aa10.86□□□□□ -0.67
SF3B3-203ENST00000562874 TAS2R45P59539 299 aa10.86□□□□□ -0.67
SF3B3-203ENST00000562874 UPK3BQ9BT76 320 aa10.86□□□□□ -0.67
SF3B3-203ENST00000562874 NAGKQ9UJ70 344 aa10.86□□□□□ -0.67
SF3B3-203ENST00000562874 H3BNG1 76 aa10.85□□□□□ -0.67
SF3B3-203ENST00000562874 ZNF266Q14584 549 aa10.85□□□□□ -0.67
SF3B3-203ENST00000562874 ST6GAL2Q96JF0 529 aa10.85□□□□□ -0.67
SF3B3-203ENST00000562874 C18orf15Q96N68 181 aa10.85□□□□□ -0.67
SF3B3-203ENST00000562874 RBAKDNA6NC62 111 aa10.84□□□□□ -0.67
SF3B3-203ENST00000562874 C16orf90A8MZG2 172 aa10.84□□□□□ -0.67
SF3B3-203ENST00000562874 F6UZH7 168 aa10.84□□□□□ -0.67
SF3B3-203ENST00000562874 GNG5P63218 68 aa10.84□□□□□ -0.67
SF3B3-203ENST00000562874 TMEM183BQ1AE95 376 aa10.84□□□□□ -0.67
SF3B3-203ENST00000562874 TTC32Q5I0X7 151 aa10.84□□□□□ -0.67
SF3B3-203ENST00000562874 TMEM183AQ8IXX5 376 aa10.84□□□□□ -0.67
SF3B3-203ENST00000562874 LYPD1Q8N2G4 141 aa10.84□□□□□ -0.67
SF3B3-203ENST00000562874 OTORQ9NRC9 128 aa10.84□□□□□ -0.67
SF3B3-203ENST00000562874 MDFICQ9P1T7 246 aa10.84□□□□□ -0.67
SF3B3-203ENST00000562874 RYR1P21817 5038 aa10.83□□□□□ -0.68
SF3B3-203ENST00000562874 PCLOQ9Y6V0 5065 aa10.83□□□□□ -0.68
SF3B3-203ENST00000562874 PGPA6NDG6 321 aa10.83□□□□□ -0.68
SF3B3-203ENST00000562874 PAX4O43316 350 aa10.83□□□□□ -0.68
SF3B3-203ENST00000562874 SFTA3P0C7M3 94 aa10.83□□□□□ -0.68
SF3B3-203ENST00000562874 ACOT6Q3I5F7 207 aaPredicted RBP10.83□□□□□ -0.68
SF3B3-203ENST00000562874 GOLT1AQ6ZVE7 132 aa10.83□□□□□ -0.68
SF3B3-203ENST00000562874 C8orf49Q96NF6 230 aa10.83□□□□□ -0.68
SF3B3-203ENST00000562874 ICOSQ9Y6W8 199 aa10.83□□□□□ -0.68
SF3B3-203ENST00000562874 TRAV8-1A0A0A6YYK1 113 aa10.82□□□□□ -0.68
SF3B3-203ENST00000562874 TRBV7-9A0A0J9YWB2 115 aa10.82□□□□□ -0.68
SF3B3-203ENST00000562874 A0A1W2PPV4 95 aa10.82□□□□□ -0.68
SF3B3-203ENST00000562874 ARL14EPLP0DKL9 152 aa10.82□□□□□ -0.68
SF3B3-203ENST00000562874 Q6AWC8 147 aa10.82□□□□□ -0.68
SF3B3-203ENST00000562874 HSD17B11Q8NBQ5 300 aa10.82□□□□□ -0.68
SF3B3-203ENST00000562874 CMTM2Q8TAZ6 248 aa10.82□□□□□ -0.68
SF3B3-203ENST00000562874 LRP1BQ9NZR2 4599 aa10.81□□□□□ -0.68
SF3B3-203ENST00000562874 HSPG2P98160 4391 aa10.81□□□□□ -0.68
SF3B3-203ENST00000562874 CDC34P49427 236 aaPredicted RBP10.81□□□□□ -0.68
SF3B3-203ENST00000562874 CRYBA4P53673 196 aa10.81□□□□□ -0.68
SF3B3-203ENST00000562874 FAM159AQ6UWV7 190 aa10.81□□□□□ -0.68
SF3B3-203ENST00000562874 OR10G4Q8NGN3 311 aa10.81□□□□□ -0.68
SF3B3-203ENST00000562874 OR10G9Q8NGN4 311 aa10.81□□□□□ -0.68
SF3B3-203ENST00000562874 OR10G7Q8NGN6 311 aa10.81□□□□□ -0.68
SF3B3-203ENST00000562874 SGK494Q96LW2 274 aa10.81□□□□□ -0.68
SF3B3-203ENST00000562874 NXPH4O95158 308 aa10.8□□□□□ -0.68
SF3B3-203ENST00000562874 LINC00315P59091 139 aa10.8□□□□□ -0.68
SF3B3-203ENST00000562874 FHL2Q14192 279 aa10.8□□□□□ -0.68
SF3B3-203ENST00000562874 PQLC2Q6ZP29 291 aa10.8□□□□□ -0.68
SF3B3-203ENST00000562874 SPATA12Q7Z6I5 190 aa10.8□□□□□ -0.68
SF3B3-203ENST00000562874 TVP23CQ96ET8 276 aa10.8□□□□□ -0.68
SF3B3-203ENST00000562874 ZNF479Q96JC4 524 aa10.8□□□□□ -0.68
SF3B3-203ENST00000562874 PRO0255Q9UI72 69 aa10.8□□□□□ -0.68
SF3B3-203ENST00000562874 TRGV11A0A075B6L2 103 aa10.79□□□□□ -0.68
SF3B3-203ENST00000562874 TRGV4A0A0C4DH28 118 aa10.79□□□□□ -0.68
SF3B3-203ENST00000562874 FAM74A1Q5RGS3 127 aa10.79□□□□□ -0.68
SF3B3-203ENST00000562874 SH3BGRL3Q9H299 93 aa10.79□□□□□ -0.68
SF3B3-203ENST00000562874 LENEPQ9Y5L5 61 aa10.79□□□□□ -0.68
SF3B3-203ENST00000562874 DNAH5Q8TE73 4624 aa10.78□□□□□ -0.68
SF3B3-203ENST00000562874 SIVA1O15304 175 aa10.78□□□□□ -0.68
SF3B3-203ENST00000562874 GNRH2O43555 120 aa10.78□□□□□ -0.68
SF3B3-203ENST00000562874 PTTG1O95997 202 aa10.78□□□□□ -0.68
SF3B3-203ENST00000562874 TYMSP04818 313 aa10.78□□□□□ -0.68
SF3B3-203ENST00000562874 ATP6V0CP27449 155 aa10.78□□□□□ -0.68
SF3B3-203ENST00000562874 Q5BKY6 102 aa10.78□□□□□ -0.68
SF3B3-203ENST00000562874 TMED6Q8WW62 240 aa10.78□□□□□ -0.68
SF3B3-203ENST00000562874 KRTAP4-5Q9BYR2 181 aa10.78□□□□□ -0.68
SF3B3-203ENST00000562874 MED28Q9H204 178 aa10.78□□□□□ -0.68
SF3B3-203ENST00000562874 TREM1Q9NP99 234 aa10.78□□□□□ -0.68
SF3B3-203ENST00000562874 BATF3Q9NR55 127 aa10.78□□□□□ -0.68
SF3B3-203ENST00000562874 HHLA3Q9XRX5 114 aa10.78□□□□□ -0.68
SF3B3-203ENST00000562874 A0A1W2PPQ1 181 aa10.77□□□□□ -0.69
SF3B3-203ENST00000562874 KRTAP10-2P60368 255 aa10.77□□□□□ -0.69
SF3B3-203ENST00000562874 AQP10Q96PS8 301 aa10.77□□□□□ -0.69
SF3B3-203ENST00000562874 APOBP04114 4563 aaKnown RBP10.76□□□□□ -0.69
SF3B3-203ENST00000562874 IGHV3-16A0A0C4DH30 117 aa10.76□□□□□ -0.69
SF3B3-203ENST00000562874 STAG3L2P0CL84 134 aa10.76□□□□□ -0.69
SF3B3-203ENST00000562874 STAG3L3P0CL85 134 aa10.76□□□□□ -0.69
SF3B3-203ENST00000562874 OR2G3Q8NGZ4 309 aa10.76□□□□□ -0.69
SF3B3-203ENST00000562874 RAB24Q969Q5 203 aa10.76□□□□□ -0.69
SF3B3-203ENST00000562874 SPXQ9BT56 116 aa10.76□□□□□ -0.69
SF3B3-203ENST00000562874 TRAV21A0A0B4J279 112 aa10.75□□□□□ -0.69
SF3B3-203ENST00000562874 LOC100131303A0A0U1RQF7 123 aa10.75□□□□□ -0.69
SF3B3-203ENST00000562874 K7EQD1 137 aa10.75□□□□□ -0.69
SF3B3-203ENST00000562874 GYPEP15421 78 aa10.75□□□□□ -0.69
SF3B3-203ENST00000562874 GCHFRP30047 84 aa10.75□□□□□ -0.69
SF3B3-203ENST00000562874 SRIP30626 198 aa10.75□□□□□ -0.69
SF3B3-203ENST00000562874 MRPL23Q16540 153 aaKnown RBP10.75□□□□□ -0.69
SF3B3-203ENST00000562874 TDRG1Q3Y452 100 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms