RNA–Protein interactions for RNA: ENST00000562791.1

CHD9-206, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 242 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-206ENST00000562791 EPDR1Q9UM22 224 aa3.36□□□□□ -1.87
CHD9-206ENST00000562791 V9GYV3 84 aa3.36□□□□□ -1.87
CHD9-206ENST00000562791 EXPH5Q8NEV8 1989 aa3.36□□□□□ -1.87
CHD9-206ENST00000562791 SMIM27A0A1W2PRY6 76 aa3.35□□□□□ -1.87
CHD9-206ENST00000562791 K7EMT4 169 aa3.35□□□□□ -1.87
CHD9-206ENST00000562791 K7EQD1 137 aa3.35□□□□□ -1.87
CHD9-206ENST00000562791 K7ERJ3 54 aa3.35□□□□□ -1.87
CHD9-206ENST00000562791 CCL21O00585 134 aa3.35□□□□□ -1.87
CHD9-206ENST00000562791 SLC25A20O43772 301 aa3.35□□□□□ -1.87
CHD9-206ENST00000562791 IGKV1D-16P01601 117 aa3.35□□□□□ -1.87
CHD9-206ENST00000562791 TCRAP04437 139 aa3.35□□□□□ -1.87
CHD9-206ENST00000562791 DYNLT3P51808 116 aa3.35□□□□□ -1.87
CHD9-206ENST00000562791 ERVK-16P61578 105 aa3.35□□□□□ -1.87
CHD9-206ENST00000562791 C1orf100Q5SVJ3 147 aa3.35□□□□□ -1.87
CHD9-206ENST00000562791 PLPP4Q5VZY2 271 aa3.35□□□□□ -1.87
CHD9-206ENST00000562791 PVRIGQ6DKI7 326 aa3.35□□□□□ -1.87
CHD9-206ENST00000562791 KTN1-AS1Q86SY8 53 aa3.35□□□□□ -1.87
CHD9-206ENST00000562791 MARCH3Q86UD3 253 aa3.35□□□□□ -1.87
CHD9-206ENST00000562791 C10orf105Q8TEF2 133 aa3.35□□□□□ -1.87
CHD9-206ENST00000562791 C11orf52Q96A22 123 aa3.35□□□□□ -1.87
CHD9-206ENST00000562791 EEF1AKMT3Q96AZ1 226 aa3.35□□□□□ -1.87
CHD9-206ENST00000562791 IFI27L1Q96BM0 104 aa3.35□□□□□ -1.87
CHD9-206ENST00000562791 LIME1Q9H400 295 aa3.35□□□□□ -1.87
CHD9-206ENST00000562791 PLEKHA3Q9HB20 300 aa3.35□□□□□ -1.87
CHD9-206ENST00000562791 NXT2Q9NPJ8 142 aaKnown RBP3.35□□□□□ -1.87
CHD9-206ENST00000562791 RBM12B-AS1Q9P1G2 102 aa3.35□□□□□ -1.87
CHD9-206ENST00000562791 DOCK8Q8NF50 2099 aa3.35□□□□□ -1.87
CHD9-206ENST00000562791 UBR3Q6ZT12 1888 aa3.35□□□□□ -1.87
CHD9-206ENST00000562791 FER1L5A0AVI2 2057 aa3.34□□□□□ -1.87
CHD9-206ENST00000562791 DOCK9Q9BZ29 2069 aa3.34□□□□□ -1.87
CHD9-206ENST00000562791 UBE2L5PA0A1B0GUS4 154 aa3.34□□□□□ -1.87
CHD9-206ENST00000562791 C17orf51A8MQB3 221 aa3.34□□□□□ -1.87
CHD9-206ENST00000562791 C11orf94C9JXX5 98 aa3.34□□□□□ -1.87
CHD9-206ENST00000562791 CCL16O15467 120 aa3.34□□□□□ -1.87
CHD9-206ENST00000562791 NDUFS5O43920 106 aa3.34□□□□□ -1.87
CHD9-206ENST00000562791 EPPINO95925 133 aa3.34□□□□□ -1.87
CHD9-206ENST00000562791 NPPCP23582 126 aa3.34□□□□□ -1.87
CHD9-206ENST00000562791 SAA4P35542 130 aa3.34□□□□□ -1.87
CHD9-206ENST00000562791 SUB1P53999 127 aaKnown RBP eCLIP3.34□□□□□ -1.87
CHD9-206ENST00000562791 ADIGQ0VDE8 80 aa3.34□□□□□ -1.87
CHD9-206ENST00000562791 TMEM52BQ4KMG9 183 aa3.34□□□□□ -1.87
CHD9-206ENST00000562791 ZNF542PQ5EBM4 170 aa3.34□□□□□ -1.87
CHD9-206ENST00000562791 SCGB1D4Q6XE38 83 aa3.34□□□□□ -1.87
CHD9-206ENST00000562791 SDIM1Q6ZPB5 146 aa3.34□□□□□ -1.87
CHD9-206ENST00000562791 FP248Q71RG6 208 aaPredicted RBP3.34□□□□□ -1.87
CHD9-206ENST00000562791 CLECL1Q8IZS7 167 aa3.34□□□□□ -1.87
CHD9-206ENST00000562791 LY6G5BQ8NDX9 201 aa3.34□□□□□ -1.87
CHD9-206ENST00000562791 TYMSOSQ8TAI1 123 aa3.34□□□□□ -1.87
CHD9-206ENST00000562791 PAXXQ9BUH6 204 aa3.34□□□□□ -1.87
CHD9-206ENST00000562791 DEFB127Q9H1M4 99 aa3.34□□□□□ -1.87
CHD9-206ENST00000562791 CALYQ9NYX4 217 aa3.34□□□□□ -1.87
CHD9-206ENST00000562791 OARD1Q9Y530 152 aa3.34□□□□□ -1.87
CHD9-206ENST00000562791 SLC25A15Q9Y619 301 aa3.34□□□□□ -1.87
CHD9-206ENST00000562791 RALGAPA1Q6GYQ0 2036 aa3.34□□□□□ -1.88
CHD9-206ENST00000562791 NUMA1Q14980 2115 aa3.34□□□□□ -1.88
CHD9-206ENST00000562791 TRBV7-3A0A075B6L6 115 aa3.33□□□□□ -1.88
CHD9-206ENST00000562791 A0A0D9SEW6 157 aa3.33□□□□□ -1.88
CHD9-206ENST00000562791 C19orf71A6NCJ1 209 aa3.33□□□□□ -1.88
CHD9-206ENST00000562791 SRRM4A7MD48 611 aaKnown RBP3.33□□□□□ -1.88
CHD9-206ENST00000562791 C8orf87E5RJ46 101 aa3.33□□□□□ -1.88
CHD9-206ENST00000562791 H3BMM0 161 aa3.33□□□□□ -1.88
CHD9-206ENST00000562791 NDUFB3O43676 98 aa3.33□□□□□ -1.88
CHD9-206ENST00000562791 NXPH4O95158 308 aa3.33□□□□□ -1.88
CHD9-206ENST00000562791 MYCNOSP40205 109 aa3.33□□□□□ -1.88
CHD9-206ENST00000562791 PSMB2P49721 201 aa3.33□□□□□ -1.88
CHD9-206ENST00000562791 ZNF136P52737 540 aa3.33□□□□□ -1.88
CHD9-206ENST00000562791 DAD1P61803 113 aa3.33□□□□□ -1.88
CHD9-206ENST00000562791 RPL18Q07020 188 aaKnown RBP3.33□□□□□ -1.88
CHD9-206ENST00000562791 CST6Q15828 149 aa3.33□□□□□ -1.88
CHD9-206ENST00000562791 UBE2WQ96B02 151 aa3.33□□□□□ -1.88
CHD9-206ENST00000562791 LINC00597Q9H2U6 94 aa3.33□□□□□ -1.88
CHD9-206ENST00000562791 RAI1Q7Z5J4 1906 aaPredicted RBP3.32□□□□□ -1.88
CHD9-206ENST00000562791 SCN10AQ9Y5Y9 1956 aa3.32□□□□□ -1.88
CHD9-206ENST00000562791 SCN2AQ99250 2005 aa3.32□□□□□ -1.88
CHD9-206ENST00000562791 GTF3C1Q12789 2109 aa3.32□□□□□ -1.88
CHD9-206ENST00000562791 ATRXP46100 2492 aa3.32□□□□□ -1.88
CHD9-206ENST00000562791 TRBV25-1A0A075B6N4 114 aa3.32□□□□□ -1.88
CHD9-206ENST00000562791 INS-IGF2F8WCM5 200 aa3.32□□□□□ -1.88
CHD9-206ENST00000562791 BCE1O60756 84 aa3.32□□□□□ -1.88
CHD9-206ENST00000562791 LYPD3O95274 346 aa3.32□□□□□ -1.88
CHD9-206ENST00000562791 HBDP02042 147 aa3.32□□□□□ -1.88
CHD9-206ENST00000562791 IFI6P09912 130 aa3.32□□□□□ -1.88
CHD9-206ENST00000562791 MGST1P10620 155 aaKnown RBP3.32□□□□□ -1.88
CHD9-206ENST00000562791 LGALS3P17931 250 aaKnown RBP3.32□□□□□ -1.88
CHD9-206ENST00000562791 COX5AP20674 150 aa3.32□□□□□ -1.88
CHD9-206ENST00000562791 UBE2D1P51668 147 aa3.32□□□□□ -1.88
CHD9-206ENST00000562791 HERVK_113P61574 105 aa3.32□□□□□ -1.88
CHD9-206ENST00000562791 ZNF56Q15929 161 aa3.32□□□□□ -1.88
CHD9-206ENST00000562791 ORMDL2Q53FV1 153 aa3.32□□□□□ -1.88
CHD9-206ENST00000562791 FAM104BQ5XKR9 115 aa3.32□□□□□ -1.88
CHD9-206ENST00000562791 CEMP1Q6PRD7 247 aaPredicted RBP3.32□□□□□ -1.88
CHD9-206ENST00000562791 ZFP2Q6ZN57 461 aa3.32□□□□□ -1.88
CHD9-206ENST00000562791 LYPD6Q86Y78 171 aa3.32□□□□□ -1.88
CHD9-206ENST00000562791 ZNF525Q8N782 197 aa3.32□□□□□ -1.88
CHD9-206ENST00000562791 GVQW1Q8N7I0 195 aa3.32□□□□□ -1.88
CHD9-206ENST00000562791 PTPRBP23467 1997 aa3.32□□□□□ -1.88
CHD9-206ENST00000562791 DOCK4Q8N1I0 1966 aa3.32□□□□□ -1.88
CHD9-206ENST00000562791 KIAA2026Q5HYC2 2103 aa3.32□□□□□ -1.88
CHD9-206ENST00000562791 KIAA1549Q9HCM3 1950 aa3.31□□□□□ -1.88
CHD9-206ENST00000562791 NUP98P52948 1817 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms