RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 A0A087X0K7 114 aa8.97□□□□□ -0.97
PCAT1-202ENST00000561978 LINC01548A6NM66 108 aa8.97□□□□□ -0.97
PCAT1-202ENST00000561978 GPX1P07203 203 aa8.97□□□□□ -0.97
PCAT1-202ENST00000561978 ID1P41134 155 aa8.97□□□□□ -0.97
PCAT1-202ENST00000561978 LINC00310P59036 64 aa8.97□□□□□ -0.97
PCAT1-202ENST00000561978 KLF5Q13887 457 aaPredicted RBP8.97□□□□□ -0.97
PCAT1-202ENST00000561978 Q6AWC8 147 aa8.97□□□□□ -0.97
PCAT1-202ENST00000561978 CLEC19AQ6UXS0 136 aa8.97□□□□□ -0.97
PCAT1-202ENST00000561978 TMEM219Q86XT9 240 aa8.97□□□□□ -0.97
PCAT1-202ENST00000561978 GTSF1Q8WW33 167 aa8.97□□□□□ -0.97
PCAT1-202ENST00000561978 ZC2HC1AQ96GY0 325 aa8.97□□□□□ -0.97
PCAT1-202ENST00000561978 KCNS1Q96KK3 526 aa8.97□□□□□ -0.97
PCAT1-202ENST00000561978 PGLYRP4Q96LB8 373 aa8.97□□□□□ -0.97
PCAT1-202ENST00000561978 ZNF785A8K8V0 405 aa8.96□□□□□ -0.98
PCAT1-202ENST00000561978 H3BUA1 57 aa8.96□□□□□ -0.98
PCAT1-202ENST00000561978 K7ERU9 68 aa8.96□□□□□ -0.98
PCAT1-202ENST00000561978 M0R3E3 92 aa8.96□□□□□ -0.98
PCAT1-202ENST00000561978 BUB3O43684 328 aa8.96□□□□□ -0.98
PCAT1-202ENST00000561978 IGF1P05019 195 aa8.96□□□□□ -0.98
PCAT1-202ENST00000561978 SAMD13Q5VXD3 122 aa8.96□□□□□ -0.98
PCAT1-202ENST00000561978 COX8CQ7Z4L0 72 aa8.96□□□□□ -0.98
PCAT1-202ENST00000561978 DUX5Q96PT3 197 aa8.96□□□□□ -0.98
PCAT1-202ENST00000561978 DEFB112Q30KQ8 113 aa8.95□□□□□ -0.98
PCAT1-202ENST00000561978 C19orf54Q5BKX5 351 aa8.95□□□□□ -0.98
PCAT1-202ENST00000561978 GDF5OSQ5U4N7 250 aa8.95□□□□□ -0.98
PCAT1-202ENST00000561978 CCDC140Q96MF4 163 aa8.95□□□□□ -0.98
PCAT1-202ENST00000561978 METTL26Q96S19 204 aa8.95□□□□□ -0.98
PCAT1-202ENST00000561978 SMAD5-AS1Q9Y6J3 95 aa8.95□□□□□ -0.98
PCAT1-202ENST00000561978 A0A1W2PS18 150 aa8.95□□□□□ -0.98
PCAT1-202ENST00000561978 SH2D7A6NKC9 451 aaPredicted RBP8.95□□□□□ -0.98
PCAT1-202ENST00000561978 RIGQ13278 110 aa8.95□□□□□ -0.98
PCAT1-202ENST00000561978 C5orf47Q569G3 176 aa8.95□□□□□ -0.98
PCAT1-202ENST00000561978 OCIAD2Q56VL3 154 aa8.95□□□□□ -0.98
PCAT1-202ENST00000561978 C18orf32Q8TCD1 76 aa8.95□□□□□ -0.98
PCAT1-202ENST00000561978 SLC50A1Q9BRV3 221 aa8.95□□□□□ -0.98
PCAT1-202ENST00000561978 STAB1Q9NY15 2570 aa8.94□□□□□ -0.98
PCAT1-202ENST00000561978 A0A1B0GUT8 65 aa8.94□□□□□ -0.98
PCAT1-202ENST00000561978 A6NDX4 124 aa8.94□□□□□ -0.98
PCAT1-202ENST00000561978 F2Z2F3 143 aa8.94□□□□□ -0.98
PCAT1-202ENST00000561978 CHEK1O14757 476 aa8.94□□□□□ -0.98
PCAT1-202ENST00000561978 CCL25O15444 150 aa8.94□□□□□ -0.98
PCAT1-202ENST00000561978 ZNF324O75467 553 aaPredicted RBP8.94□□□□□ -0.98
PCAT1-202ENST00000561978 IGHG2P01859 326 aa8.94□□□□□ -0.98
PCAT1-202ENST00000561978 UBE2V1Q13404 147 aa8.94□□□□□ -0.98
PCAT1-202ENST00000561978 C9orf139Q6ZV77 190 aa8.94□□□□□ -0.98
PCAT1-202ENST00000561978 BORCS7Q96B45 105 aa8.94□□□□□ -0.98
PCAT1-202ENST00000561978 USMG5Q96IX5 58 aa8.94□□□□□ -0.98
PCAT1-202ENST00000561978 IGHV3-35A0A0C4DH35 117 aa8.93□□□□□ -0.98
PCAT1-202ENST00000561978 TRGV3P03979 118 aa8.93□□□□□ -0.98
PCAT1-202ENST00000561978 AMTP48728 403 aa8.93□□□□□ -0.98
PCAT1-202ENST00000561978 Q6ZWC4 215 aa8.93□□□□□ -0.98
PCAT1-202ENST00000561978 ZNF664Q8N3J9 261 aa8.93□□□□□ -0.98
PCAT1-202ENST00000561978 ZNF418Q8TF45 676 aaPredicted RBP8.93□□□□□ -0.98
PCAT1-202ENST00000561978 NDFIP1Q9BT67 221 aa8.93□□□□□ -0.98
PCAT1-202ENST00000561978 ESM1Q9NQ30 184 aa8.93□□□□□ -0.98
PCAT1-202ENST00000561978 TENM1Q9UKZ4 2725 aa8.93□□□□□ -0.98
PCAT1-202ENST00000561978 RBAKDNA6NC62 111 aa8.93□□□□□ -0.98
PCAT1-202ENST00000561978 ZNF705FA8MVS1 300 aaPredicted RBP8.93□□□□□ -0.98
PCAT1-202ENST00000561978 H3BUX3 64 aa8.93□□□□□ -0.98
PCAT1-202ENST00000561978 ZNF705DP0CH99 300 aaPredicted RBP8.93□□□□□ -0.98
PCAT1-202ENST00000561978 ZNF705BP0CI00 300 aaPredicted RBP8.93□□□□□ -0.98
PCAT1-202ENST00000561978 CRIP1P50238 77 aa8.93□□□□□ -0.98
PCAT1-202ENST00000561978 RIPPLY3P57055 190 aa8.93□□□□□ -0.98
PCAT1-202ENST00000561978 COL5A1-AS1Q5SY13 56 aa8.93□□□□□ -0.98
PCAT1-202ENST00000561978 LCN12Q6JVE5 192 aa8.93□□□□□ -0.98
PCAT1-202ENST00000561978 PRR25Q96S07 402 aa8.93□□□□□ -0.98
PCAT1-202ENST00000561978 SSBP4Q9BWG4 385 aaPredicted RBP8.93□□□□□ -0.98
PCAT1-202ENST00000561978 CLPSL1A2RUU4 121 aa8.92□□□□□ -0.98
PCAT1-202ENST00000561978 TMEM189A5PLL7 270 aa8.92□□□□□ -0.98
PCAT1-202ENST00000561978 HILS1P60008 231 aa8.92□□□□□ -0.98
PCAT1-202ENST00000561978 RCHY1Q96PM5 261 aa8.92□□□□□ -0.98
PCAT1-202ENST00000561978 NRN1Q9NPD7 142 aa8.92□□□□□ -0.98
PCAT1-202ENST00000561978 U3KQE9 123 aa8.92□□□□□ -0.98
PCAT1-202ENST00000561978 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.92□□□□□ -0.98
PCAT1-202ENST00000561978 OR11H12B2RN74 326 aa8.92□□□□□ -0.98
PCAT1-202ENST00000561978 HOXA3O43365 443 aaPredicted RBP8.92□□□□□ -0.98
PCAT1-202ENST00000561978 TSPAN13O95857 204 aa8.92□□□□□ -0.98
PCAT1-202ENST00000561978 APOHP02749 345 aaPredicted RBP8.92□□□□□ -0.98
PCAT1-202ENST00000561978 LY6EQ16553 131 aa8.92□□□□□ -0.98
PCAT1-202ENST00000561978 GATD1Q8NB37 220 aa8.92□□□□□ -0.98
PCAT1-202ENST00000561978 OR11H1Q8NG94 326 aa8.92□□□□□ -0.98
PCAT1-202ENST00000561978 OR11H2Q8NH07 326 aa8.92□□□□□ -0.98
PCAT1-202ENST00000561978 MRPL53Q96EL3 112 aaKnown RBP8.92□□□□□ -0.98
PCAT1-202ENST00000561978 C8orf49Q96NF6 230 aa8.92□□□□□ -0.98
PCAT1-202ENST00000561978 IGHV3OR16-8A0A075B7F1 116 aa8.91□□□□□ -0.98
PCAT1-202ENST00000561978 IGKV2-40A0A087WW87 121 aaPredicted RBP8.91□□□□□ -0.98
PCAT1-202ENST00000561978 DNAJC9-AS1A6NH13 148 aa8.91□□□□□ -0.98
PCAT1-202ENST00000561978 SNAI2O43623 268 aa8.91□□□□□ -0.98
PCAT1-202ENST00000561978 HSBP1O75506 76 aa8.91□□□□□ -0.98
PCAT1-202ENST00000561978 IGKV2D-40P01614 121 aaPredicted RBP8.91□□□□□ -0.98
PCAT1-202ENST00000561978 PMCHP20382 165 aa8.91□□□□□ -0.98
PCAT1-202ENST00000561978 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.91□□□□□ -0.98
PCAT1-202ENST00000561978 LOC102724200A0A096LPH7 203 aaPredicted RBP8.9□□□□□ -0.98
PCAT1-202ENST00000561978 A0A0G2JLM5 398 aa8.9□□□□□ -0.98
PCAT1-202ENST00000561978 NDUFA4O00483 81 aa8.9□□□□□ -0.98
PCAT1-202ENST00000561978 SH2D1AO60880 128 aa8.9□□□□□ -0.98
PCAT1-202ENST00000561978 IGHV4-59P01825 116 aa8.9□□□□□ -0.98
PCAT1-202ENST00000561978 IGHG4P01861 327 aa8.9□□□□□ -0.98
PCAT1-202ENST00000561978 PPIFP30405 207 aaKnown RBP8.9□□□□□ -0.98
PCAT1-202ENST00000561978 Q6YL49 198 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms