RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 PRSS3P2Q8NHM4 247 aa8.55□□□□□ -1.04
NEIL1-202ENST00000561643 IGHV3OR16-8A0A075B7F1 116 aa8.55□□□□□ -1.04
NEIL1-202ENST00000561643 IGHV3-35A0A0C4DH35 117 aa8.55□□□□□ -1.04
NEIL1-202ENST00000561643 UFC1Q9Y3C8 167 aa8.55□□□□□ -1.04
NEIL1-202ENST00000561643 OOSP1A8MZH6 123 aa8.54□□□□□ -1.04
NEIL1-202ENST00000561643 SH2D1AO60880 128 aa8.54□□□□□ -1.04
NEIL1-202ENST00000561643 CACNG7P62955 275 aa8.54□□□□□ -1.04
NEIL1-202ENST00000561643 LOXL1Q08397 574 aaPredicted RBP8.54□□□□□ -1.04
NEIL1-202ENST00000561643 LYZL1Q6UWQ5 148 aa8.54□□□□□ -1.04
NEIL1-202ENST00000561643 SMIM13P0DJ93 91 aa8.54□□□□□ -1.04
NEIL1-202ENST00000561643 ZFP36P26651 326 aaKnown RBP8.54□□□□□ -1.04
NEIL1-202ENST00000561643 FXYD2P54710 66 aa8.54□□□□□ -1.04
NEIL1-202ENST00000561643 UCNP55089 124 aa8.54□□□□□ -1.04
NEIL1-202ENST00000561643 MINOS1Q5TGZ0 78 aa8.54□□□□□ -1.04
NEIL1-202ENST00000561643 Q8N6K4 173 aa8.54□□□□□ -1.04
NEIL1-202ENST00000561643 SPAG8Q99932 426 aaPredicted RBP8.54□□□□□ -1.04
NEIL1-202ENST00000561643 C20orf78Q9BR46 151 aa8.54□□□□□ -1.04
NEIL1-202ENST00000561643 SPANXB1Q9NS25 103 aaPredicted RBP8.54□□□□□ -1.04
NEIL1-202ENST00000561643 MINOS1-NBL1R4GNA1 71 aa8.54□□□□□ -1.04
NEIL1-202ENST00000561643 FAM208BQ5VWN6 2430 aa8.54□□□□□ -1.04
NEIL1-202ENST00000561643 CTSGP08311 255 aa8.53□□□□□ -1.04
NEIL1-202ENST00000561643 IGFL4Q6B9Z1 124 aa8.53□□□□□ -1.04
NEIL1-202ENST00000561643 Q8TAT8 98 aa8.53□□□□□ -1.04
NEIL1-202ENST00000561643 VGLL1Q99990 258 aa8.53□□□□□ -1.04
NEIL1-202ENST00000561643 IGHV7-81A0A0B4J1V7 117 aa8.53□□□□□ -1.04
NEIL1-202ENST00000561643 LOC389332A0A1B0GUA5 103 aa8.53□□□□□ -1.04
NEIL1-202ENST00000561643 TMEM213A2RRL7 107 aa8.53□□□□□ -1.04
NEIL1-202ENST00000561643 NDUFS7O75251 213 aa8.53□□□□□ -1.04
NEIL1-202ENST00000561643 GATD1Q8NB37 220 aa8.53□□□□□ -1.04
NEIL1-202ENST00000561643 TTTY13Q9BZ97 58 aa8.53□□□□□ -1.04
NEIL1-202ENST00000561643 SPINK8P0C7L1 97 aa8.53□□□□□ -1.04
NEIL1-202ENST00000561643 ECSCRQ19T08 205 aa8.53□□□□□ -1.04
NEIL1-202ENST00000561643 AMTNQ6UX39 209 aa8.53□□□□□ -1.04
NEIL1-202ENST00000561643 OR9G4Q8NGQ1 327 aa8.53□□□□□ -1.04
NEIL1-202ENST00000561643 CSMD1Q96PZ7 3565 aa8.53□□□□□ -1.04
NEIL1-202ENST00000561643 D6R8Y8 96 aa8.52□□□□□ -1.05
NEIL1-202ENST00000561643 J3QR89 54 aa8.52□□□□□ -1.05
NEIL1-202ENST00000561643 EBI3Q14213 229 aa8.52□□□□□ -1.05
NEIL1-202ENST00000561643 C3orf56Q8N813 242 aa8.52□□□□□ -1.05
NEIL1-202ENST00000561643 OR4X2Q8NGF9 303 aa8.52□□□□□ -1.05
NEIL1-202ENST00000561643 PRR25Q96S07 402 aa8.52□□□□□ -1.05
NEIL1-202ENST00000561643 MT-ATP8P03928 68 aa8.52□□□□□ -1.05
NEIL1-202ENST00000561643 WFDC3Q8IUB2 231 aa8.52□□□□□ -1.05
NEIL1-202ENST00000561643 AMN1Q8IY45 258 aa8.52□□□□□ -1.05
NEIL1-202ENST00000561643 SPATA25Q9BR10 227 aa8.52□□□□□ -1.05
NEIL1-202ENST00000561643 TSPAN13O95857 204 aa8.51□□□□□ -1.05
NEIL1-202ENST00000561643 EGR2P11161 476 aaPredicted RBP8.51□□□□□ -1.05
NEIL1-202ENST00000561643 HLA-DMBP28068 263 aa8.51□□□□□ -1.05
NEIL1-202ENST00000561643 IFI27P40305 119 aaPredicted RBP8.51□□□□□ -1.05
NEIL1-202ENST00000561643 ZNF493Q6ZR52 646 aa8.51□□□□□ -1.05
NEIL1-202ENST00000561643 Q8N9W7 124 aa8.51□□□□□ -1.05
NEIL1-202ENST00000561643 RPL32P62910 135 aaKnown RBP8.51□□□□□ -1.05
NEIL1-202ENST00000561643 C15orf32Q32M92 178 aa8.51□□□□□ -1.05
NEIL1-202ENST00000561643 DTX2Q86UW9 622 aa8.51□□□□□ -1.05
NEIL1-202ENST00000561643 PRELID3AQ96N28 172 aa8.51□□□□□ -1.05
NEIL1-202ENST00000561643 ANAPC13Q9BS18 74 aa8.51□□□□□ -1.05
NEIL1-202ENST00000561643 NHP2Q9NX24 153 aaKnown RBP8.51□□□□□ -1.05
NEIL1-202ENST00000561643 HRNRQ86YZ3 2850 aaPredicted RBP8.51□□□□□ -1.05
NEIL1-202ENST00000561643 H3BMG7 143 aa8.51□□□□□ -1.05
NEIL1-202ENST00000561643 ARL3P36405 182 aa8.51□□□□□ -1.05
NEIL1-202ENST00000561643 FAM104BQ5XKR9 115 aa8.51□□□□□ -1.05
NEIL1-202ENST00000561643 SIRPDQ9H106 197 aa8.51□□□□□ -1.05
NEIL1-202ENST00000561643 MRPL16Q9NX20 251 aaKnown RBP8.51□□□□□ -1.05
NEIL1-202ENST00000561643 SMAD5-AS1Q9Y6J3 95 aa8.51□□□□□ -1.05
NEIL1-202ENST00000561643 A0A096LNJ9 63 aa8.5□□□□□ -1.05
NEIL1-202ENST00000561643 TCTEX1D4Q5JR98 221 aa8.5□□□□□ -1.05
NEIL1-202ENST00000561643 FOXI2Q6ZQN5 318 aa8.5□□□□□ -1.05
NEIL1-202ENST00000561643 ORMDL3Q8N138 153 aa8.5□□□□□ -1.05
NEIL1-202ENST00000561643 UBTD1Q9HAC8 227 aa8.5□□□□□ -1.05
NEIL1-202ENST00000561643 A0A1W2PPR1 153 aa8.5□□□□□ -1.05
NEIL1-202ENST00000561643 PRB1P04280 392 aa8.5□□□□□ -1.05
NEIL1-202ENST00000561643 TWIST1Q15672 202 aa8.5□□□□□ -1.05
NEIL1-202ENST00000561643 ZNF80P51504 273 aaPredicted RBP8.49□□□□□ -1.05
NEIL1-202ENST00000561643 SIGLEC8Q9NYZ4 499 aa8.49□□□□□ -1.05
NEIL1-202ENST00000561643 MYO18BQ8IUG5 2567 aa8.49□□□□□ -1.05
NEIL1-202ENST00000561643 ORM1P02763 201 aa8.49□□□□□ -1.05
NEIL1-202ENST00000561643 LCNL1Q6ZST4 164 aa8.49□□□□□ -1.05
NEIL1-202ENST00000561643 FAM110DQ8TAY7 271 aaPredicted RBP8.49□□□□□ -1.05
NEIL1-202ENST00000561643 DPF1Q92782 380 aa8.49□□□□□ -1.05
NEIL1-202ENST00000561643 USP24Q9UPU5 2620 aa8.49□□□□□ -1.05
NEIL1-202ENST00000561643 ATP6V0E1O15342 81 aa8.49□□□□□ -1.05
NEIL1-202ENST00000561643 MRPL51Q4U2R6 128 aaKnown RBP8.49□□□□□ -1.05
NEIL1-202ENST00000561643 TRBV20-1A0A075B6N2 111 aa8.48□□□□□ -1.05
NEIL1-202ENST00000561643 IGHV3-66A0A0C4DH42 116 aa8.48□□□□□ -1.05
NEIL1-202ENST00000561643 IGHG4P01861 327 aa8.48□□□□□ -1.05
NEIL1-202ENST00000561643 CKS2P33552 79 aa8.48□□□□□ -1.05
NEIL1-202ENST00000561643 SAA4P35542 130 aa8.48□□□□□ -1.05
NEIL1-202ENST00000561643 UBE2E1P51965 193 aa8.48□□□□□ -1.05
NEIL1-202ENST00000561643 COX8CQ7Z4L0 72 aa8.48□□□□□ -1.05
NEIL1-202ENST00000561643 ZNF502Q8TBZ5 544 aa8.48□□□□□ -1.05
NEIL1-202ENST00000561643 DKK2Q9UBU2 259 aa8.48□□□□□ -1.05
NEIL1-202ENST00000561643 COL12A1Q99715 3063 aa8.48□□□□□ -1.05
NEIL1-202ENST00000561643 SMKR1H3BMG3 65 aa8.48□□□□□ -1.05
NEIL1-202ENST00000561643 LGALS9BQ3B8N2 356 aa8.48□□□□□ -1.05
NEIL1-202ENST00000561643 LGALS9CQ6DKI2 356 aa8.48□□□□□ -1.05
NEIL1-202ENST00000561643 SYT8Q8NBV8 401 aa8.48□□□□□ -1.05
NEIL1-202ENST00000561643 GLMPQ8WWB7 406 aa8.48□□□□□ -1.05
NEIL1-202ENST00000561643 IGHV3OR16-13A0A075B7E8 117 aa8.48□□□□□ -1.05
NEIL1-202ENST00000561643 IGHV3-74A0A0B4J1X5 117 aa8.48□□□□□ -1.05
NEIL1-202ENST00000561643 ERCC8Q13216 396 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms