RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 FAM210BQ96KR6 192 aa5.65□□□□□ -1.5
TPM1-231ENST00000561395 DUX3Q96PT4 197 aa5.65□□□□□ -1.5
TPM1-231ENST00000561395 PRR25Q96S07 402 aa5.65□□□□□ -1.5
TPM1-231ENST00000561395 ASCL2Q99929 193 aa5.65□□□□□ -1.5
TPM1-231ENST00000561395 CITED2Q99967 270 aaPredicted RBP5.65□□□□□ -1.5
TPM1-231ENST00000561395 MS4A6AQ9H2W1 248 aa5.65□□□□□ -1.5
TPM1-231ENST00000561395 DNAH9Q9NYC9 4486 aa5.64□□□□□ -1.51
TPM1-231ENST00000561395 IGKV3-7A0A075B6H7 116 aa5.64□□□□□ -1.51
TPM1-231ENST00000561395 SMIM27A0A1W2PRY6 76 aa5.64□□□□□ -1.51
TPM1-231ENST00000561395 NPIPB6E9PJ23 425 aa5.64□□□□□ -1.51
TPM1-231ENST00000561395 CCL24O00175 119 aa5.64□□□□□ -1.51
TPM1-231ENST00000561395 P01737 135 aa5.64□□□□□ -1.51
TPM1-231ENST00000561395 CSN3P07498 182 aa5.64□□□□□ -1.51
TPM1-231ENST00000561395 SAPCD1Q5SSQ6 148 aa5.64□□□□□ -1.51
TPM1-231ENST00000561395 C9orf47Q6ZRZ4 202 aa5.64□□□□□ -1.51
TPM1-231ENST00000561395 OR4B1Q8NGF8 309 aa5.64□□□□□ -1.51
TPM1-231ENST00000561395 DLX4Q92988 240 aaPredicted RBP5.64□□□□□ -1.51
TPM1-231ENST00000561395 BTF3L4Q96K17 158 aa5.64□□□□□ -1.51
TPM1-231ENST00000561395 C8orf49Q96NF6 230 aa5.64□□□□□ -1.51
TPM1-231ENST00000561395 NDFIP1Q9BT67 221 aa5.64□□□□□ -1.51
TPM1-231ENST00000561395 RPP21Q9H633 154 aaKnown RBP5.64□□□□□ -1.51
TPM1-231ENST00000561395 PPP1R14DQ9NXH3 145 aa5.64□□□□□ -1.51
TPM1-231ENST00000561395 SELENOKQ9Y6D0 94 aa5.64□□□□□ -1.51
TPM1-231ENST00000561395 C1orf196B1AJZ1 125 aa5.63□□□□□ -1.51
TPM1-231ENST00000561395 K7EQG2 157 aa5.63□□□□□ -1.51
TPM1-231ENST00000561395 OVOL1O14753 267 aa5.63□□□□□ -1.51
TPM1-231ENST00000561395 CA1P00915 261 aaPredicted RBP5.63□□□□□ -1.51
TPM1-231ENST00000561395 TYMSP04818 313 aa5.63□□□□□ -1.51
TPM1-231ENST00000561395 CT45A10P0DMU9 189 aa5.63□□□□□ -1.51
TPM1-231ENST00000561395 ID1P41134 155 aa5.63□□□□□ -1.51
TPM1-231ENST00000561395 RPS10P46783 165 aaKnown RBP5.63□□□□□ -1.51
TPM1-231ENST00000561395 CRIP1P50238 77 aa5.63□□□□□ -1.51
TPM1-231ENST00000561395 ZNF138P52744 262 aa5.63□□□□□ -1.51
TPM1-231ENST00000561395 DEFB121Q5J5C9 76 aa5.63□□□□□ -1.51
TPM1-231ENST00000561395 FAM162BQ5T6X4 162 aa5.63□□□□□ -1.51
TPM1-231ENST00000561395 TMEM78Q5T7P6 136 aa5.63□□□□□ -1.51
TPM1-231ENST00000561395 OR10J6PQ8NGY7 276 aa5.63□□□□□ -1.51
TPM1-231ENST00000561395 TSKUQ8WUA8 353 aa5.63□□□□□ -1.51
TPM1-231ENST00000561395 DAZAP1Q96EP5 407 aaKnown RBP5.63□□□□□ -1.51
TPM1-231ENST00000561395 AGPAT4-IT1Q9H0P7 198 aa5.63□□□□□ -1.51
TPM1-231ENST00000561395 TRAV2A0A0B4J234 112 aa5.62□□□□□ -1.51
TPM1-231ENST00000561395 A8MWL6 223 aa5.62□□□□□ -1.51
TPM1-231ENST00000561395 K7EIL1 84 aa5.62□□□□□ -1.51
TPM1-231ENST00000561395 SH2D1AO60880 128 aa5.62□□□□□ -1.51
TPM1-231ENST00000561395 TFPI2P48307 235 aa5.62□□□□□ -1.51
TPM1-231ENST00000561395 TCL1AP56279 114 aa5.62□□□□□ -1.51
TPM1-231ENST00000561395 RAB5BP61020 215 aa5.62□□□□□ -1.51
TPM1-231ENST00000561395 PAFAH1B2P68402 229 aa5.62□□□□□ -1.51
TPM1-231ENST00000561395 SMUG1Q53HV7 270 aa5.62□□□□□ -1.51
TPM1-231ENST00000561395 WFDC3Q8IUB2 231 aa5.62□□□□□ -1.51
TPM1-231ENST00000561395 OR8A1Q8NGG7 326 aa5.62□□□□□ -1.51
TPM1-231ENST00000561395 DYNLRB2Q8TF09 96 aa5.62□□□□□ -1.51
TPM1-231ENST00000561395 LINC00477Q96M19 166 aa5.62□□□□□ -1.51
TPM1-231ENST00000561395 NEU1Q99519 415 aa5.62□□□□□ -1.51
TPM1-231ENST00000561395 LYSTQ99698 3801 aa5.62□□□□□ -1.51
TPM1-231ENST00000561395 GFRA4Q9GZZ7 299 aa5.62□□□□□ -1.51
TPM1-231ENST00000561395 SRD5A3Q9H8P0 318 aa5.62□□□□□ -1.51
TPM1-231ENST00000561395 LENEPQ9Y5L5 61 aa5.62□□□□□ -1.51
TPM1-231ENST00000561395 FAM231BA6NCW3 169 aa5.61□□□□□ -1.51
TPM1-231ENST00000561395 IZUMO1RA6ND01 250 aa5.61□□□□□ -1.51
TPM1-231ENST00000561395 HIGD1CA8MV81 97 aa5.61□□□□□ -1.51
TPM1-231ENST00000561395 PHOX2AO14813 284 aa5.61□□□□□ -1.51
TPM1-231ENST00000561395 ZNF688P0C7X2 276 aa5.61□□□□□ -1.51
TPM1-231ENST00000561395 ZNF705DP0CH99 300 aaPredicted RBP5.61□□□□□ -1.51
TPM1-231ENST00000561395 ZNF705BP0CI00 300 aaPredicted RBP5.61□□□□□ -1.51
TPM1-231ENST00000561395 ZNF80P51504 273 aaPredicted RBP5.61□□□□□ -1.51
TPM1-231ENST00000561395 DEFB1P60022 68 aa5.61□□□□□ -1.51
TPM1-231ENST00000561395 SNRPD3P62318 126 aaKnown RBP5.61□□□□□ -1.51
TPM1-231ENST00000561395 HIST1H1AQ02539 215 aaPredicted RBP5.61□□□□□ -1.51
TPM1-231ENST00000561395 NSUN5P1Q3KNT7 163 aa5.61□□□□□ -1.51
TPM1-231ENST00000561395 PSMG4Q5JS54 123 aa5.61□□□□□ -1.51
TPM1-231ENST00000561395 ACTL10Q5JWF8 245 aa5.61□□□□□ -1.51
TPM1-231ENST00000561395 NDUFA11Q86Y39 141 aa5.61□□□□□ -1.51
TPM1-231ENST00000561395 OR2D3Q8NGH3 330 aa5.61□□□□□ -1.51
TPM1-231ENST00000561395 FAM19A4Q96LR4 140 aa5.61□□□□□ -1.51
TPM1-231ENST00000561395 SIGLEC8Q9NYZ4 499 aa5.61□□□□□ -1.51
TPM1-231ENST00000561395 NAT8BQ9UHF3 227 aa5.61□□□□□ -1.51
TPM1-231ENST00000561395 TRBV7-9A0A0J9YWB2 115 aa5.6□□□□□ -1.51
TPM1-231ENST00000561395 F6UB75 175 aa5.6□□□□□ -1.51
TPM1-231ENST00000561395 TRGC2P03986 189 aa5.6□□□□□ -1.51
TPM1-231ENST00000561395 RPL19P84098 196 aaKnown RBP5.6□□□□□ -1.51
TPM1-231ENST00000561395 DEFB114Q30KQ6 69 aa5.6□□□□□ -1.51
TPM1-231ENST00000561395 RBPMS2Q6ZRY4 209 aaKnown RBP5.6□□□□□ -1.51
TPM1-231ENST00000561395 TMEM61Q8N0U2 210 aa5.6□□□□□ -1.51
TPM1-231ENST00000561395 ZFP82Q8N141 532 aa5.6□□□□□ -1.51
TPM1-231ENST00000561395 NUP35Q8NFH5 326 aa5.6□□□□□ -1.51
TPM1-231ENST00000561395 GTSF1Q8WW33 167 aa5.6□□□□□ -1.51
TPM1-231ENST00000561395 MCRIP2Q9BUT9 160 aaKnown RBP5.6□□□□□ -1.51
TPM1-231ENST00000561395 STAB2Q8WWQ8 2551 aa5.6□□□□□ -1.51
TPM1-231ENST00000561395 SACSQ9NZJ4 4579 aa5.59□□□□□ -1.51
TPM1-231ENST00000561395 TRAV25A0A0B4J276 109 aa5.59□□□□□ -1.51
TPM1-231ENST00000561395 A0A0J9YX75 114 aa5.59□□□□□ -1.51
TPM1-231ENST00000561395 XKRY2A2RUG3 117 aa5.59□□□□□ -1.51
TPM1-231ENST00000561395 TMEM189A5PLL7 270 aa5.59□□□□□ -1.51
TPM1-231ENST00000561395 FABP5P3A8MUU1 101 aa5.59□□□□□ -1.51
TPM1-231ENST00000561395 FRMD6-AS1P0C7T7 363 aa5.59□□□□□ -1.51
TPM1-231ENST00000561395 NHLRC4P0CG21 123 aaPredicted RBP5.59□□□□□ -1.51
TPM1-231ENST00000561395 GZMBP10144 247 aa5.59□□□□□ -1.51
TPM1-231ENST00000561395 CRISP2P16562 243 aa5.59□□□□□ -1.51
TPM1-231ENST00000561395 FOXA3P55318 350 aaPredicted RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms