RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 TRGC1P0CF51 173 aa12.84□□□□□ -0.35
HDDC3-206ENST00000561036 FABP9Q0Z7S8 132 aa12.84□□□□□ -0.35
HDDC3-206ENST00000561036 DEFB114Q30KQ6 69 aa12.84□□□□□ -0.35
HDDC3-206ENST00000561036 ODF3Q96PU9 254 aa12.84□□□□□ -0.35
HDDC3-206ENST00000561036 A0A1B0GXF2 115 aa12.83□□□□□ -0.36
HDDC3-206ENST00000561036 HLA-DQA1P01909 254 aa12.83□□□□□ -0.36
HDDC3-206ENST00000561036 CRISP2P16562 243 aa12.83□□□□□ -0.36
HDDC3-206ENST00000561036 TFPI2P48307 235 aa12.83□□□□□ -0.36
HDDC3-206ENST00000561036 LINC01559Q495D7 138 aa12.83□□□□□ -0.36
HDDC3-206ENST00000561036 PSMG4Q5JS54 123 aa12.83□□□□□ -0.36
HDDC3-206ENST00000561036 MRPL54Q6P161 138 aaKnown RBP12.83□□□□□ -0.36
HDDC3-206ENST00000561036 TMEM136Q6ZRR5 245 aa12.83□□□□□ -0.36
HDDC3-206ENST00000561036 APRG1Q8IVJ8 170 aa12.83□□□□□ -0.36
HDDC3-206ENST00000561036 SELENOKQ9Y6D0 94 aa12.83□□□□□ -0.36
HDDC3-206ENST00000561036 A0A1B0GW15 77 aa12.82□□□□□ -0.36
HDDC3-206ENST00000561036 C5orf52A6NGY3 159 aa12.82□□□□□ -0.36
HDDC3-206ENST00000561036 SNURFLB1AK76 121 aa12.82□□□□□ -0.36
HDDC3-206ENST00000561036 SPINK4O60575 86 aa12.82□□□□□ -0.36
HDDC3-206ENST00000561036 DUSP14O95147 198 aaKnown RBP12.82□□□□□ -0.36
HDDC3-206ENST00000561036 ZNF688P0C7X2 276 aa12.82□□□□□ -0.36
HDDC3-206ENST00000561036 ZNF705DP0CH99 300 aaPredicted RBP12.82□□□□□ -0.36
HDDC3-206ENST00000561036 ZNF705BP0CI00 300 aaPredicted RBP12.82□□□□□ -0.36
HDDC3-206ENST00000561036 HIST2H2BDQ6DRA6 164 aa12.82□□□□□ -0.36
HDDC3-206ENST00000561036 EBLN2Q6P2I7 272 aa12.82□□□□□ -0.36
HDDC3-206ENST00000561036 ZFAND2AQ8N6M9 145 aa12.82□□□□□ -0.36
HDDC3-206ENST00000561036 PGLYRP4Q96LB8 373 aa12.82□□□□□ -0.36
HDDC3-206ENST00000561036 MRPL18Q9H0U6 180 aaKnown RBP12.82□□□□□ -0.36
HDDC3-206ENST00000561036 A0A0J9YX75 114 aa12.81□□□□□ -0.36
HDDC3-206ENST00000561036 GZMBP10144 247 aa12.81□□□□□ -0.36
HDDC3-206ENST00000561036 HBBP68871 147 aa12.81□□□□□ -0.36
HDDC3-206ENST00000561036 FOXI2Q6ZQN5 318 aa12.81□□□□□ -0.36
HDDC3-206ENST00000561036 TMEM61Q8N0U2 210 aa12.81□□□□□ -0.36
HDDC3-206ENST00000561036 SPAG8Q99932 426 aaPredicted RBP12.81□□□□□ -0.36
HDDC3-206ENST00000561036 A0A1B0GUT8 65 aa12.8□□□□□ -0.36
HDDC3-206ENST00000561036 OR4C46A6NHA9 309 aa12.8□□□□□ -0.36
HDDC3-206ENST00000561036 F6UB75 175 aa12.8□□□□□ -0.36
HDDC3-206ENST00000561036 ORM1P02763 201 aa12.8□□□□□ -0.36
HDDC3-206ENST00000561036 S100A8P05109 93 aa12.8□□□□□ -0.36
HDDC3-206ENST00000561036 FRMD6-AS1P0C7T7 363 aa12.8□□□□□ -0.36
HDDC3-206ENST00000561036 RIGQ13278 110 aa12.8□□□□□ -0.36
HDDC3-206ENST00000561036 BORCS7Q96B45 105 aa12.8□□□□□ -0.36
HDDC3-206ENST00000561036 HIVEP1P15822 2718 aa12.79□□□□□ -0.36
HDDC3-206ENST00000561036 TRAV21A0A0B4J279 112 aa12.79□□□□□ -0.36
HDDC3-206ENST00000561036 LEPP41159 167 aa12.79□□□□□ -0.36
HDDC3-206ENST00000561036 NDUFA6P56556 154 aa12.79□□□□□ -0.36
HDDC3-206ENST00000561036 DEFB1P60022 68 aa12.79□□□□□ -0.36
HDDC3-206ENST00000561036 KRTAP10-3P60369 221 aa12.79□□□□□ -0.36
HDDC3-206ENST00000561036 RAB4BP61018 213 aa12.79□□□□□ -0.36
HDDC3-206ENST00000561036 SNRPEP62304 92 aaKnown RBP12.79□□□□□ -0.36
HDDC3-206ENST00000561036 FN1P02751 2386 aaKnown RBP12.78□□□□□ -0.36
HDDC3-206ENST00000561036 KLLNB2CW77 178 aa12.78□□□□□ -0.36
HDDC3-206ENST00000561036 UBE2CO00762 179 aa12.78□□□□□ -0.36
HDDC3-206ENST00000561036 GPX1P07203 203 aa12.78□□□□□ -0.36
HDDC3-206ENST00000561036 IGLC6P0CF74 106 aa12.78□□□□□ -0.36
HDDC3-206ENST00000561036 CTRLP40313 264 aa12.78□□□□□ -0.36
HDDC3-206ENST00000561036 NSUN5P1Q3KNT7 163 aa12.78□□□□□ -0.36
HDDC3-206ENST00000561036 CD300EQ496F6 205 aaPredicted RBP12.78□□□□□ -0.36
HDDC3-206ENST00000561036 COA6Q5JTJ3 125 aaKnown RBP12.78□□□□□ -0.36
HDDC3-206ENST00000561036 GATD1Q8NB37 220 aa12.78□□□□□ -0.36
HDDC3-206ENST00000561036 TMSB15BA0A087X1C1 80 aa12.77□□□□□ -0.37
HDDC3-206ENST00000561036 F2Z2F3 143 aa12.77□□□□□ -0.37
HDDC3-206ENST00000561036 APCSP02743 223 aa12.77□□□□□ -0.37
HDDC3-206ENST00000561036 HOXA5P20719 270 aa12.77□□□□□ -0.37
HDDC3-206ENST00000561036 TSPOP30536 169 aa12.77□□□□□ -0.37
HDDC3-206ENST00000561036 PRR9Q5T870 116 aa12.77□□□□□ -0.37
HDDC3-206ENST00000561036 FER1L6-AS1Q8NA97 138 aa12.77□□□□□ -0.37
HDDC3-206ENST00000561036 OR2K2Q8NGT1 345 aa12.77□□□□□ -0.37
HDDC3-206ENST00000561036 NSD1Q96L73 2696 aaPredicted RBP12.76□□□□□ -0.37
HDDC3-206ENST00000561036 IGKV3D-20A0A0C4DH25 116 aa12.76□□□□□ -0.37
HDDC3-206ENST00000561036 A8MTW9 85 aa12.76□□□□□ -0.37
HDDC3-206ENST00000561036 GDF5OSQ5U4N7 250 aa12.76□□□□□ -0.37
HDDC3-206ENST00000561036 LYZL1Q6UWQ5 148 aa12.76□□□□□ -0.37
HDDC3-206ENST00000561036 ZNF575Q86XF7 245 aa12.76□□□□□ -0.37
HDDC3-206ENST00000561036 RNASE4P34096 147 aaKnown RBP12.75□□□□□ -0.37
HDDC3-206ENST00000561036 CAMPP49913 170 aa12.75□□□□□ -0.37
HDDC3-206ENST00000561036 CMC4P56277 68 aaPredicted RBP12.75□□□□□ -0.37
HDDC3-206ENST00000561036 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.75□□□□□ -0.37
HDDC3-206ENST00000561036 CNFNQ9BYD5 112 aa12.75□□□□□ -0.37
HDDC3-206ENST00000561036 C11orf21Q9P2W6 132 aa12.75□□□□□ -0.37
HDDC3-206ENST00000561036 ZNF256Q9Y2P7 627 aaPredicted RBP12.75□□□□□ -0.37
HDDC3-206ENST00000561036 ARMS2P0C7Q2 107 aa12.74□□□□□ -0.37
HDDC3-206ENST00000561036 CD33P20138 364 aa12.74□□□□□ -0.37
HDDC3-206ENST00000561036 DEFB131AP59861 70 aa12.74□□□□□ -0.37
HDDC3-206ENST00000561036 HLA-DRB4P13762 266 aa12.73□□□□□ -0.37
HDDC3-206ENST00000561036 CLUHP3Q96NS8 147 aa12.73□□□□□ -0.37
HDDC3-206ENST00000561036 TPPP3Q9BW30 176 aa12.73□□□□□ -0.37
HDDC3-206ENST00000561036 MAP6D1Q9H9H5 199 aa12.73□□□□□ -0.37
HDDC3-206ENST00000561036 HLA-DRB4X5D2U9 266 aa12.73□□□□□ -0.37
HDDC3-206ENST00000561036 C7orf71A4D174 169 aa12.72□□□□□ -0.37
HDDC3-206ENST00000561036 SAP30O75446 220 aa12.72□□□□□ -0.37
HDDC3-206ENST00000561036 IGLV1-51P01701 117 aa12.72□□□□□ -0.37
HDDC3-206ENST00000561036 PF4P02776 101 aa12.72□□□□□ -0.37
HDDC3-206ENST00000561036 OR5AL1P0C617 328 aa12.72□□□□□ -0.37
HDDC3-206ENST00000561036 Q0VG73 95 aa12.72□□□□□ -0.37
HDDC3-206ENST00000561036 SLAQ13239 276 aa12.72□□□□□ -0.37
HDDC3-206ENST00000561036 DNLZQ5SXM8 178 aa12.72□□□□□ -0.37
HDDC3-206ENST00000561036 AMTNQ6UX39 209 aa12.72□□□□□ -0.37
HDDC3-206ENST00000561036 ZNF493Q6ZR52 646 aa12.72□□□□□ -0.37
HDDC3-206ENST00000561036 SSBP4Q9BWG4 385 aaPredicted RBP12.72□□□□□ -0.37
HDDC3-206ENST00000561036 GRIFINA4D1Z8 144 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms