RNA–Protein interactions for RNA: ENST00000560852.1

IRF9-211, Transcript of interferon regulatory factor 9, humanhuman

TSL 3

Gene IRF9, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-211ENST00000560852 TDRG1Q3Y452 100 aa8.75□□□□□ -1.01
IRF9-211ENST00000560852 Q8NAQ8 132 aa8.75□□□□□ -1.01
IRF9-211ENST00000560852 OR11H2Q8NH07 326 aa8.75□□□□□ -1.01
IRF9-211ENST00000560852 LINC00479Q96M42 142 aa8.75□□□□□ -1.01
IRF9-211ENST00000560852 PYGO2Q9BRQ0 406 aa8.75□□□□□ -1.01
IRF9-211ENST00000560852 COL7A1Q02388 2944 aa8.74□□□□□ -1.01
IRF9-211ENST00000560852 A0A1B0GV50 99 aa8.74□□□□□ -1.01
IRF9-211ENST00000560852 TMEM189A5PLL7 270 aa8.74□□□□□ -1.01
IRF9-211ENST00000560852 GPX1P07203 203 aa8.74□□□□□ -1.01
IRF9-211ENST00000560852 ANXA2RQ3ZCQ2 193 aa8.74□□□□□ -1.01
IRF9-211ENST00000560852 CLLU1Q5K131 121 aa8.74□□□□□ -1.01
IRF9-211ENST00000560852 ZNF493Q6ZR52 646 aa8.74□□□□□ -1.01
IRF9-211ENST00000560852 NDFIP1Q9BT67 221 aa8.74□□□□□ -1.01
IRF9-211ENST00000560852 TREM1Q9NP99 234 aa8.74□□□□□ -1.01
IRF9-211ENST00000560852 TRAV12-2A0A075B6T6 113 aa8.73□□□□□ -1.01
IRF9-211ENST00000560852 SCO2A0A1W2PP80 73 aa8.73□□□□□ -1.01
IRF9-211ENST00000560852 RGS13O14921 159 aa8.73□□□□□ -1.01
IRF9-211ENST00000560852 FXYD7P58549 80 aa8.73□□□□□ -1.01
IRF9-211ENST00000560852 Q86TA4 180 aa8.73□□□□□ -1.01
IRF9-211ENST00000560852 TMEM183AQ8IXX5 376 aa8.73□□□□□ -1.01
IRF9-211ENST00000560852 Q8TAT8 98 aa8.73□□□□□ -1.01
IRF9-211ENST00000560852 NIPSNAP3BQ9BS92 247 aa8.73□□□□□ -1.01
IRF9-211ENST00000560852 RETNQ9HD89 108 aa8.73□□□□□ -1.01
IRF9-211ENST00000560852 NBEAL2Q6ZNJ1 2754 aa8.73□□□□□ -1.01
IRF9-211ENST00000560852 TRAV21A0A0B4J279 112 aa8.72□□□□□ -1.01
IRF9-211ENST00000560852 PRB4P10163 310 aaPredicted RBP8.72□□□□□ -1.01
IRF9-211ENST00000560852 RRN3P1Q2M238 152 aa8.72□□□□□ -1.01
IRF9-211ENST00000560852 SMUG1Q53HV7 270 aa8.72□□□□□ -1.01
IRF9-211ENST00000560852 PRR9Q5T870 116 aa8.72□□□□□ -1.01
IRF9-211ENST00000560852 MED9Q9NWA0 146 aa8.72□□□□□ -1.01
IRF9-211ENST00000560852 TRAV12-3A0A0B4J271 114 aa8.71□□□□□ -1.02
IRF9-211ENST00000560852 TRAV34A0A0B4J273 112 aa8.71□□□□□ -1.02
IRF9-211ENST00000560852 PLAC8L1A1L4L8 177 aa8.71□□□□□ -1.02
IRF9-211ENST00000560852 C9JCJ5 164 aa8.71□□□□□ -1.02
IRF9-211ENST00000560852 PFN1P07737 140 aaKnown RBP8.71□□□□□ -1.02
IRF9-211ENST00000560852 RNASE4P34096 147 aaKnown RBP8.71□□□□□ -1.02
IRF9-211ENST00000560852 AKR1C3P42330 323 aa8.71□□□□□ -1.02
IRF9-211ENST00000560852 RPL35P42766 123 aaKnown RBP8.71□□□□□ -1.02
IRF9-211ENST00000560852 RAB14P61106 215 aa8.71□□□□□ -1.02
IRF9-211ENST00000560852 UBE2G1P62253 170 aa8.71□□□□□ -1.02
IRF9-211ENST00000560852 BTN1A1Q13410 526 aa8.71□□□□□ -1.02
IRF9-211ENST00000560852 PRNTQ86SH4 94 aa8.71□□□□□ -1.02
IRF9-211ENST00000560852 RNASE8Q8TDE3 154 aaKnown RBP8.71□□□□□ -1.02
IRF9-211ENST00000560852 LINC01587Q99440 93 aa8.71□□□□□ -1.02
IRF9-211ENST00000560852 RPH3ALQ9UNE2 315 aa8.71□□□□□ -1.02
IRF9-211ENST00000560852 IGHV4-28A0A0C4DH34 117 aa8.7□□□□□ -1.02
IRF9-211ENST00000560852 TEX48A0A1B0GUV7 120 aa8.7□□□□□ -1.02
IRF9-211ENST00000560852 FABP5P3A8MUU1 101 aa8.7□□□□□ -1.02
IRF9-211ENST00000560852 CRIP1P50238 77 aa8.7□□□□□ -1.02
IRF9-211ENST00000560852 ZNF80P51504 273 aaPredicted RBP8.7□□□□□ -1.02
IRF9-211ENST00000560852 ZNF674Q2M3X9 581 aa8.7□□□□□ -1.02
IRF9-211ENST00000560852 IBA57Q5T440 356 aaKnown RBP8.7□□□□□ -1.02
IRF9-211ENST00000560852 BAGE2Q86Y30 109 aa8.7□□□□□ -1.02
IRF9-211ENST00000560852 EIF4E3Q8N5X7 224 aaKnown RBP8.7□□□□□ -1.02
IRF9-211ENST00000560852 TMEM263Q8WUH6 116 aaKnown RBP8.7□□□□□ -1.02
IRF9-211ENST00000560852 SGK494Q96LW2 274 aa8.7□□□□□ -1.02
IRF9-211ENST00000560852 LY96Q9Y6Y9 160 aa8.7□□□□□ -1.02
IRF9-211ENST00000560852 IGHV1OR15-1A0A075B7D0 117 aa8.69□□□□□ -1.02
IRF9-211ENST00000560852 RAB19A4D1S5 217 aa8.69□□□□□ -1.02
IRF9-211ENST00000560852 IGLV2-8P01709 118 aa8.69□□□□□ -1.02
IRF9-211ENST00000560852 SRP19P09132 144 aaKnown RBP8.69□□□□□ -1.02
IRF9-211ENST00000560852 DAZ2Q13117 558 aaKnown RBP8.69□□□□□ -1.02
IRF9-211ENST00000560852 DNLZQ5SXM8 178 aa8.69□□□□□ -1.02
IRF9-211ENST00000560852 ZNF575Q86XF7 245 aa8.69□□□□□ -1.02
IRF9-211ENST00000560852 LINC00612Q8N6U2 182 aa8.69□□□□□ -1.02
IRF9-211ENST00000560852 IL17DQ8TAD2 202 aa8.69□□□□□ -1.02
IRF9-211ENST00000560852 C16orf74Q96GX8 76 aa8.69□□□□□ -1.02
IRF9-211ENST00000560852 KCNS1Q96KK3 526 aa8.69□□□□□ -1.02
IRF9-211ENST00000560852 TMEM208Q9BTX3 173 aa8.69□□□□□ -1.02
IRF9-211ENST00000560852 TENM3Q9P273 2699 aa8.69□□□□□ -1.02
IRF9-211ENST00000560852 TRBV20OR9-2A0A075B6H5 130 aa8.68□□□□□ -1.02
IRF9-211ENST00000560852 LYRM9A8MSI8 78 aa8.68□□□□□ -1.02
IRF9-211ENST00000560852 GCGP01275 180 aa8.68□□□□□ -1.02
IRF9-211ENST00000560852 AZU1P20160 251 aa8.68□□□□□ -1.02
IRF9-211ENST00000560852 PEA15Q15121 130 aa8.68□□□□□ -1.02
IRF9-211ENST00000560852 C11orf72Q8NBR9 251 aa8.68□□□□□ -1.02
IRF9-211ENST00000560852 PTH2Q96A98 100 aa8.68□□□□□ -1.02
IRF9-211ENST00000560852 ZC2HC1AQ96GY0 325 aa8.68□□□□□ -1.02
IRF9-211ENST00000560852 C18orf15Q96N68 181 aa8.68□□□□□ -1.02
IRF9-211ENST00000560852 C8orf49Q96NF6 230 aa8.68□□□□□ -1.02
IRF9-211ENST00000560852 WWC2-AS2Q96NR7 200 aa8.68□□□□□ -1.02
IRF9-211ENST00000560852 DERL1Q9BUN8 251 aa8.68□□□□□ -1.02
IRF9-211ENST00000560852 EIF5A2Q9GZV4 153 aaKnown RBP8.68□□□□□ -1.02
IRF9-211ENST00000560852 STAB2Q8WWQ8 2551 aa8.67□□□□□ -1.02
IRF9-211ENST00000560852 A0A0J9YWU9 116 aa8.67□□□□□ -1.02
IRF9-211ENST00000560852 ZNF705GA8MUZ8 300 aaPredicted RBP8.67□□□□□ -1.02
IRF9-211ENST00000560852 CXCL1P09341 107 aa8.67□□□□□ -1.02
IRF9-211ENST00000560852 FAM74A3Q4VXF1 159 aa8.67□□□□□ -1.02
IRF9-211ENST00000560852 TOR2AQ5JU69 321 aa8.67□□□□□ -1.02
IRF9-211ENST00000560852 FAM162BQ5T6X4 162 aa8.67□□□□□ -1.02
IRF9-211ENST00000560852 FAM159AQ6UWV7 190 aa8.67□□□□□ -1.02
IRF9-211ENST00000560852 Q6ZQT7 251 aa8.67□□□□□ -1.02
IRF9-211ENST00000560852 BIN3Q9NQY0 253 aa8.67□□□□□ -1.02
IRF9-211ENST00000560852 C11orf21Q9P2W6 132 aa8.67□□□□□ -1.02
IRF9-211ENST00000560852 DKK2Q9UBU2 259 aa8.67□□□□□ -1.02
IRF9-211ENST00000560852 IGHV3OR16-12A0A075B7B8 117 aa8.66□□□□□ -1.02
IRF9-211ENST00000560852 LGALS9BQ3B8N2 356 aa8.66□□□□□ -1.02
IRF9-211ENST00000560852 LINC01559Q495D7 138 aa8.66□□□□□ -1.02
IRF9-211ENST00000560852 CENPWQ5EE01 88 aa8.66□□□□□ -1.02
IRF9-211ENST00000560852 NDUFAF3Q9BU61 184 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms