RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 AHCTF1Q8WYP5 2266 aa-0.47□□□□□ -2.48
PSMA4-221ENST00000560842 FGD6Q6ZV73 1430 aa-0.47□□□□□ -2.48
PSMA4-221ENST00000560842 MUC12Q9UKN1 5478 aa-0.47□□□□□ -2.48
PSMA4-221ENST00000560842 MAP2P11137 1827 aaKnown RBP-0.47□□□□□ -2.48
PSMA4-221ENST00000560842 AFDNP55196 1824 aaKnown RBP-0.47□□□□□ -2.48
PSMA4-221ENST00000560842 TRDV1A0A1B0GX56 115 aa-0.47□□□□□ -2.48
PSMA4-221ENST00000560842 A0A1W2PPB8 328 aa-0.47□□□□□ -2.48
PSMA4-221ENST00000560842 A0A1W2PRS3 328 aa-0.47□□□□□ -2.48
PSMA4-221ENST00000560842 KIR3DP1A8MWS1 328 aa-0.47□□□□□ -2.48
PSMA4-221ENST00000560842 C3orf62Q6ZUJ4 267 aa-0.47□□□□□ -2.48
PSMA4-221ENST00000560842 TMED4Q7Z7H5 227 aa-0.47□□□□□ -2.48
PSMA4-221ENST00000560842 SMIM20Q8N5G0 67 aa-0.47□□□□□ -2.48
PSMA4-221ENST00000560842 CELSR2Q9HCU4 2923 aa-0.47□□□□□ -2.48
PSMA4-221ENST00000560842 MUC2Q02817 5179 aa-0.47□□□□□ -2.49
PSMA4-221ENST00000560842 LOC101927531A0A1B0GV80 90 aa-0.48□□□□□ -2.49
PSMA4-221ENST00000560842 SAA1P0DJI8 122 aaPredicted RBP-0.48□□□□□ -2.49
PSMA4-221ENST00000560842 GLRXP35754 106 aa-0.48□□□□□ -2.49
PSMA4-221ENST00000560842 VMO1Q7Z5L0 202 aa-0.48□□□□□ -2.49
PSMA4-221ENST00000560842 TMEM229BQ8NBD8 167 aa-0.48□□□□□ -2.49
PSMA4-221ENST00000560842 C19orf12Q9NSK7 152 aa-0.48□□□□□ -2.49
PSMA4-221ENST00000560842 U3KQA8 63 aa-0.48□□□□□ -2.49
PSMA4-221ENST00000560842 TANC1Q9C0D5 1861 aa-0.48□□□□□ -2.49
PSMA4-221ENST00000560842 YTHDC2Q9H6S0 1430 aaKnown RBP-0.48□□□□□ -2.49
PSMA4-221ENST00000560842 DLC1Q96QB1 1528 aa-0.48□□□□□ -2.49
PSMA4-221ENST00000560842 HIGD1CA8MV81 97 aa-0.49□□□□□ -2.49
PSMA4-221ENST00000560842 H7BYZ3 331 aa-0.49□□□□□ -2.49
PSMA4-221ENST00000560842 MPC1Q9Y5U8 109 aa-0.49□□□□□ -2.49
PSMA4-221ENST00000560842 ARL5CA6NH57 179 aa-0.5□□□□□ -2.49
PSMA4-221ENST00000560842 C5orf58C9J3I9 102 aa-0.5□□□□□ -2.49
PSMA4-221ENST00000560842 DNAJB13P59910 316 aa-0.5□□□□□ -2.49
PSMA4-221ENST00000560842 MAXP61244 160 aa-0.5□□□□□ -2.49
PSMA4-221ENST00000560842 Q5XG85 94 aa-0.5□□□□□ -2.49
PSMA4-221ENST00000560842 CROCCP2Q86T23 111 aa-0.5□□□□□ -2.49
PSMA4-221ENST00000560842 OR5H6Q8NGV6 325 aa-0.5□□□□□ -2.49
PSMA4-221ENST00000560842 MRPL36Q9P0J6 103 aaKnown RBP-0.5□□□□□ -2.49
PSMA4-221ENST00000560842 UFC1Q9Y3C8 167 aa-0.5□□□□□ -2.49
PSMA4-221ENST00000560842 NUP210Q8TEM1 1887 aaPredicted RBP-0.5□□□□□ -2.49
PSMA4-221ENST00000560842 CACNA1AO00555 2505 aa-0.5□□□□□ -2.49
PSMA4-221ENST00000560842 BBIP1A8MTZ0 92 aa-0.51□□□□□ -2.49
PSMA4-221ENST00000560842 FABP2P12104 132 aa-0.51□□□□□ -2.49
PSMA4-221ENST00000560842 TPT1P13693 172 aaKnown RBP-0.51□□□□□ -2.49
PSMA4-221ENST00000560842 TCTAP57738 103 aa-0.51□□□□□ -2.49
PSMA4-221ENST00000560842 TAS2R41P59536 307 aa-0.51□□□□□ -2.49
PSMA4-221ENST00000560842 JMJD1CQ15652 2540 aa-0.51□□□□□ -2.49
PSMA4-221ENST00000560842 PRELID3AQ96N28 172 aa-0.51□□□□□ -2.49
PSMA4-221ENST00000560842 STOML2Q9UJZ1 356 aa-0.51□□□□□ -2.49
PSMA4-221ENST00000560842 GABARAPH6UMI1 98 aa-0.52□□□□□ -2.49
PSMA4-221ENST00000560842 KLKP1Q107X0 134 aa-0.52□□□□□ -2.49
PSMA4-221ENST00000560842 AP3S1Q92572 193 aa-0.52□□□□□ -2.49
PSMA4-221ENST00000560842 STAB1Q9NY15 2570 aa-0.52□□□□□ -2.49
PSMA4-221ENST00000560842 RREB1Q92766 1687 aa-0.53□□□□□ -2.49
PSMA4-221ENST00000560842 WDR97A6NE52 1622 aa-0.53□□□□□ -2.49
PSMA4-221ENST00000560842 SYNMO15061 1565 aa-0.53□□□□□ -2.49
PSMA4-221ENST00000560842 FAM135BQ49AJ0 1406 aa-0.53□□□□□ -2.49
PSMA4-221ENST00000560842 MRPS15P82914 257 aaKnown RBP-0.53□□□□□ -2.49
PSMA4-221ENST00000560842 SREK1IP1Q8N9Q2 155 aaPredicted RBP-0.53□□□□□ -2.49
PSMA4-221ENST00000560842 BOLA2Q9H3K6 86 aa-0.53□□□□□ -2.49
PSMA4-221ENST00000560842 MED11Q9P086 117 aa-0.53□□□□□ -2.49
PSMA4-221ENST00000560842 COMMD3Q9UBI1 195 aa-0.53□□□□□ -2.49
PSMA4-221ENST00000560842 FAM208BQ5VWN6 2430 aa-0.53□□□□□ -2.49
PSMA4-221ENST00000560842 BLMP54132 1417 aaPredicted RBP-0.54□□□□□ -2.5
PSMA4-221ENST00000560842 DLEC1Q9Y238 1755 aa-0.54□□□□□ -2.5
PSMA4-221ENST00000560842 TRBV27A0A0K0K1C4 114 aa-0.54□□□□□ -2.5
PSMA4-221ENST00000560842 FXYD1O00168 92 aa-0.54□□□□□ -2.5
PSMA4-221ENST00000560842 STX19Q8N4C7 294 aa-0.54□□□□□ -2.5
PSMA4-221ENST00000560842 FAM24BQ8N5W8 94 aa-0.54□□□□□ -2.5
PSMA4-221ENST00000560842 TMEM14BQ9NUH8 114 aa-0.54□□□□□ -2.5
PSMA4-221ENST00000560842 CDK12Q9NYV4 1490 aaPredicted RBP-0.54□□□□□ -2.5
PSMA4-221ENST00000560842 LRP2P98164 4655 aa-0.55□□□□□ -2.5
PSMA4-221ENST00000560842 TANC2Q9HCD6 1990 aa-0.55□□□□□ -2.5
PSMA4-221ENST00000560842 FLNAP21333 2647 aaKnown RBP-0.55□□□□□ -2.5
PSMA4-221ENST00000560842 TMEM30CPA0ZSE6 113 aa-0.55□□□□□ -2.5
PSMA4-221ENST00000560842 IFITM5A6NNB3 132 aa-0.55□□□□□ -2.5
PSMA4-221ENST00000560842 BCL2P10415 239 aa-0.55□□□□□ -2.5
PSMA4-221ENST00000560842 SDC2P34741 201 aa-0.55□□□□□ -2.5
PSMA4-221ENST00000560842 LYPD5Q6UWN5 251 aa-0.55□□□□□ -2.5
PSMA4-221ENST00000560842 MORN4Q8NDC4 146 aa-0.55□□□□□ -2.5
PSMA4-221ENST00000560842 DMAC1Q96GE9 116 aa-0.55□□□□□ -2.5
PSMA4-221ENST00000560842 BIN3Q9NQY0 253 aa-0.55□□□□□ -2.5
PSMA4-221ENST00000560842 FKBP11Q9NYL4 201 aa-0.55□□□□□ -2.5
PSMA4-221ENST00000560842 CPDO75976 1380 aa-0.56□□□□□ -2.5
PSMA4-221ENST00000560842 ESPL1Q14674 2120 aa-0.56□□□□□ -2.5
PSMA4-221ENST00000560842 LOC107984156A0A0G2JMH3 177 aa-0.56□□□□□ -2.5
PSMA4-221ENST00000560842 LOC107986453A0A1B0GWG9 222 aa-0.56□□□□□ -2.5
PSMA4-221ENST00000560842 C10orf142B7Z368 130 aa-0.56□□□□□ -2.5
PSMA4-221ENST00000560842 TPST1O60507 370 aa-0.56□□□□□ -2.5
PSMA4-221ENST00000560842 ARL17AQ8IVW1 177 aa-0.56□□□□□ -2.5
PSMA4-221ENST00000560842 FAM213BQ8TBF2 198 aa-0.56□□□□□ -2.5
PSMA4-221ENST00000560842 TENM4Q6N022 2769 aa-0.56□□□□□ -2.5
PSMA4-221ENST00000560842 CHD9Q3L8U1 2897 aa-0.56□□□□□ -2.5
PSMA4-221ENST00000560842 ZANQ9Y493 2812 aa-0.56□□□□□ -2.5
PSMA4-221ENST00000560842 TRBV7-6A0A0J9YX20 115 aa-0.57□□□□□ -2.5
PSMA4-221ENST00000560842 OR8J3Q8NGG0 315 aa-0.57□□□□□ -2.5
PSMA4-221ENST00000560842 LAMTOR2Q9Y2Q5 125 aa-0.57□□□□□ -2.5
PSMA4-221ENST00000560842 ZCCHC6Q5VYS8 1495 aaKnown RBP-0.57□□□□□ -2.5
PSMA4-221ENST00000560842 NCOR1O75376 2440 aa-0.57□□□□□ -2.5
PSMA4-221ENST00000560842 SRRM2Q9UQ35 2752 aaKnown RBP-0.58□□□□□ -2.5
PSMA4-221ENST00000560842 MPC1LP0DKB6 136 aa-0.58□□□□□ -2.5
PSMA4-221ENST00000560842 SERPINB1P30740 379 aa-0.58□□□□□ -2.5
PSMA4-221ENST00000560842 S100A11P31949 105 aa-0.58□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms