RNA–Protein interactions for RNA: ENST00000560825.5

GABPB1-210, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-210ENST00000560825 MUC21Q5SSG8 566 aa7.7□□□□□ -1.18
GABPB1-210ENST00000560825 CCDC28AQ8IWP9 274 aa7.7□□□□□ -1.18
GABPB1-210ENST00000560825 RXFP4Q8TDU9 374 aa7.7□□□□□ -1.18
GABPB1-210ENST00000560825 LINC00477Q96M19 166 aa7.7□□□□□ -1.18
GABPB1-210ENST00000560825 Q9H3A6 140 aa7.7□□□□□ -1.18
GABPB1-210ENST00000560825 MDFICQ9P1T7 246 aa7.7□□□□□ -1.18
GABPB1-210ENST00000560825 ALG5Q9Y673 324 aa7.7□□□□□ -1.18
GABPB1-210ENST00000560825 FUSP35637 526 aaKnown RBP eCLIP7.69□□□□□ -1.18
GABPB1-210ENST00000560825 RAB2AP61019 212 aa7.69□□□□□ -1.18
GABPB1-210ENST00000560825 EIF4E3Q8N5X7 224 aaKnown RBP7.69□□□□□ -1.18
GABPB1-210ENST00000560825 TVP23CQ96ET8 276 aa7.69□□□□□ -1.18
GABPB1-210ENST00000560825 LINC00467Q9BRT7 94 aa7.69□□□□□ -1.18
GABPB1-210ENST00000560825 Q9H8V8 135 aa7.69□□□□□ -1.18
GABPB1-210ENST00000560825 PRELID1Q9Y255 219 aa7.69□□□□□ -1.18
GABPB1-210ENST00000560825 ZNF138P52744 262 aa7.69□□□□□ -1.18
GABPB1-210ENST00000560825 CCL18P55774 89 aa7.69□□□□□ -1.18
GABPB1-210ENST00000560825 TCL1AP56279 114 aa7.69□□□□□ -1.18
GABPB1-210ENST00000560825 UBE2L3P68036 154 aaKnown RBP7.69□□□□□ -1.18
GABPB1-210ENST00000560825 ANXA2RQ3ZCQ2 193 aa7.69□□□□□ -1.18
GABPB1-210ENST00000560825 TMEM78Q5T7P6 136 aa7.69□□□□□ -1.18
GABPB1-210ENST00000560825 C6orf223Q8N319 242 aa7.69□□□□□ -1.18
GABPB1-210ENST00000560825 MRPL32Q9BYC8 188 aaKnown RBP7.69□□□□□ -1.18
GABPB1-210ENST00000560825 AAMDCQ9H7C9 122 aa7.69□□□□□ -1.18
GABPB1-210ENST00000560825 TNFRSF18Q9Y5U5 241 aa7.69□□□□□ -1.18
GABPB1-210ENST00000560825 TRAV8-1A0A0A6YYK1 113 aa7.68□□□□□ -1.18
GABPB1-210ENST00000560825 DIRC3C9JPN6 131 aa7.68□□□□□ -1.18
GABPB1-210ENST00000560825 SFTA3P0C7M3 94 aa7.68□□□□□ -1.18
GABPB1-210ENST00000560825 MED14OSP0DP75 135 aa7.68□□□□□ -1.18
GABPB1-210ENST00000560825 FAM3BP58499 235 aaPredicted RBP7.68□□□□□ -1.18
GABPB1-210ENST00000560825 GNG5P63218 68 aa7.68□□□□□ -1.18
GABPB1-210ENST00000560825 CYCSP99999 105 aaKnown RBP7.68□□□□□ -1.18
GABPB1-210ENST00000560825 SGK494Q96LW2 274 aa7.68□□□□□ -1.18
GABPB1-210ENST00000560825 HYLS1Q96M11 299 aa7.68□□□□□ -1.18
GABPB1-210ENST00000560825 RPH3ALQ9UNE2 315 aa7.68□□□□□ -1.18
GABPB1-210ENST00000560825 TRGV2A0A075B6R0 118 aa7.67□□□□□ -1.18
GABPB1-210ENST00000560825 IGHV1OR15-1A0A075B7D0 117 aa7.67□□□□□ -1.18
GABPB1-210ENST00000560825 KRTAP10-2P60368 255 aa7.67□□□□□ -1.18
GABPB1-210ENST00000560825 FHL2Q14192 279 aa7.67□□□□□ -1.18
GABPB1-210ENST00000560825 C17orf112F2Z3M2 114 aa7.66□□□□□ -1.18
GABPB1-210ENST00000560825 F6UZH7 168 aa7.66□□□□□ -1.18
GABPB1-210ENST00000560825 RGS13O14921 159 aa7.66□□□□□ -1.18
GABPB1-210ENST00000560825 GNRH2O43555 120 aa7.66□□□□□ -1.18
GABPB1-210ENST00000560825 ZNF266Q14584 549 aa7.66□□□□□ -1.18
GABPB1-210ENST00000560825 ZNF680Q8NEM1 530 aa7.66□□□□□ -1.18
GABPB1-210ENST00000560825 ZNF479Q96JC4 524 aa7.66□□□□□ -1.18
GABPB1-210ENST00000560825 C18orf15Q96N68 181 aa7.66□□□□□ -1.18
GABPB1-210ENST00000560825 SH3BGRL3Q9H299 93 aa7.66□□□□□ -1.18
GABPB1-210ENST00000560825 PGPA6NDG6 321 aa7.65□□□□□ -1.18
GABPB1-210ENST00000560825 IBA57Q5T440 356 aaKnown RBP7.65□□□□□ -1.18
GABPB1-210ENST00000560825 Q6ZRN7 208 aaPredicted RBP7.65□□□□□ -1.18
GABPB1-210ENST00000560825 ST6GAL2Q96JF0 529 aa7.65□□□□□ -1.18
GABPB1-210ENST00000560825 C8orf49Q96NF6 230 aa7.65□□□□□ -1.18
GABPB1-210ENST00000560825 UPK3BQ9BT76 320 aa7.65□□□□□ -1.18
GABPB1-210ENST00000560825 C11orf21Q9P2W6 132 aa7.65□□□□□ -1.18
GABPB1-210ENST00000560825 MRPS16Q9Y3D3 137 aaKnown RBP7.65□□□□□ -1.18
GABPB1-210ENST00000560825 LOC100131303A0A0U1RQF7 123 aa7.64□□□□□ -1.19
GABPB1-210ENST00000560825 RBAKDNA6NC62 111 aa7.64□□□□□ -1.19
GABPB1-210ENST00000560825 H3BNG1 76 aa7.64□□□□□ -1.19
GABPB1-210ENST00000560825 NMBP08949 121 aa7.64□□□□□ -1.19
GABPB1-210ENST00000560825 ZNF80P51504 273 aaPredicted RBP7.64□□□□□ -1.19
GABPB1-210ENST00000560825 CRYBA4P53673 196 aa7.64□□□□□ -1.19
GABPB1-210ENST00000560825 TMEM183BQ1AE95 376 aa7.64□□□□□ -1.19
GABPB1-210ENST00000560825 KHDC3LQ587J8 217 aa7.64□□□□□ -1.19
GABPB1-210ENST00000560825 Q6AWC8 147 aa7.64□□□□□ -1.19
GABPB1-210ENST00000560825 GOLT1AQ6ZVE7 132 aa7.64□□□□□ -1.19
GABPB1-210ENST00000560825 TMEM183AQ8IXX5 376 aa7.64□□□□□ -1.19
GABPB1-210ENST00000560825 HSD17B11Q8NBQ5 300 aa7.64□□□□□ -1.19
GABPB1-210ENST00000560825 SCGB1C1Q8TD33 95 aa7.64□□□□□ -1.19
GABPB1-210ENST00000560825 G3V3Q6 166 aa7.63□□□□□ -1.19
GABPB1-210ENST00000560825 IFNA5P01569 189 aa7.63□□□□□ -1.19
GABPB1-210ENST00000560825 ARL14EPLP0DKL9 152 aa7.63□□□□□ -1.19
GABPB1-210ENST00000560825 LINC00315P59091 139 aa7.63□□□□□ -1.19
GABPB1-210ENST00000560825 DEFA1P59665 94 aa7.63□□□□□ -1.19
GABPB1-210ENST00000560825 DEFA3P59666 94 aa7.63□□□□□ -1.19
GABPB1-210ENST00000560825 SOHLH1Q5JUK2 328 aa7.63□□□□□ -1.19
GABPB1-210ENST00000560825 LYPD1Q8N2G4 141 aa7.63□□□□□ -1.19
GABPB1-210ENST00000560825 TMEM75Q8N9X5 138 aa7.63□□□□□ -1.19
GABPB1-210ENST00000560825 OR10G4Q8NGN3 311 aa7.63□□□□□ -1.19
GABPB1-210ENST00000560825 OR10G9Q8NGN4 311 aa7.63□□□□□ -1.19
GABPB1-210ENST00000560825 OR10G7Q8NGN6 311 aa7.63□□□□□ -1.19
GABPB1-210ENST00000560825 OTORQ9NRC9 128 aa7.63□□□□□ -1.19
GABPB1-210ENST00000560825 KCNIP2Q9NS61 270 aa7.63□□□□□ -1.19
GABPB1-210ENST00000560825 NAGKQ9UJ70 344 aa7.63□□□□□ -1.19
GABPB1-210ENST00000560825 C16orf90A8MZG2 172 aa7.62□□□□□ -1.19
GABPB1-210ENST00000560825 PAX4O43316 350 aa7.62□□□□□ -1.19
GABPB1-210ENST00000560825 IGLV2-11P01706 119 aa7.62□□□□□ -1.19
GABPB1-210ENST00000560825 ATP6V0CP27449 155 aa7.62□□□□□ -1.19
GABPB1-210ENST00000560825 LYPD5Q6UWN5 251 aa7.62□□□□□ -1.19
GABPB1-210ENST00000560825 SPATA12Q7Z6I5 190 aa7.62□□□□□ -1.19
GABPB1-210ENST00000560825 FAT1Q14517 4588 aa7.62□□□□□ -1.19
GABPB1-210ENST00000560825 IGHV3-16A0A0C4DH30 117 aa7.61□□□□□ -1.19
GABPB1-210ENST00000560825 RNF222A6NCQ9 220 aa7.61□□□□□ -1.19
GABPB1-210ENST00000560825 NXPH4O95158 308 aa7.61□□□□□ -1.19
GABPB1-210ENST00000560825 TYMSP04818 313 aa7.61□□□□□ -1.19
GABPB1-210ENST00000560825 PET100P0DJ07 73 aa7.61□□□□□ -1.19
GABPB1-210ENST00000560825 CSN1S1P47710 185 aa7.61□□□□□ -1.19
GABPB1-210ENST00000560825 ZNF415Q09FC8 603 aa7.61□□□□□ -1.19
GABPB1-210ENST00000560825 ZNF726P1Q15940 193 aa7.61□□□□□ -1.19
GABPB1-210ENST00000560825 LCE3BQ5TA77 95 aa7.61□□□□□ -1.19
GABPB1-210ENST00000560825 DPPA3Q6W0C5 159 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms