RNA–Protein interactions for RNA: ENST00000559849.5

CHRNB4-204, Transcript of cholinergic receptor nicotinic beta 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNB4, Length 2,080 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4-204ENST00000559849 TRAV12-2A0A075B6T6 113 aa9.85□□□□□ -0.83
CHRNB4-204ENST00000559849 TMEM189A5PLL7 270 aa9.85□□□□□ -0.83
CHRNB4-204ENST00000559849 HBE1P02100 147 aa9.85□□□□□ -0.83
CHRNB4-204ENST00000559849 DDTP30046 118 aa9.85□□□□□ -0.83
CHRNB4-204ENST00000559849 PYY3Q5JQD4 70 aa9.85□□□□□ -0.83
CHRNB4-204ENST00000559849 RAB24Q969Q5 203 aa9.85□□□□□ -0.83
CHRNB4-204ENST00000559849 LINC00477Q96M19 166 aa9.85□□□□□ -0.83
CHRNB4-204ENST00000559849 ODF3Q96PU9 254 aa9.85□□□□□ -0.83
CHRNB4-204ENST00000559849 TSTD3H0UI37 97 aa9.84□□□□□ -0.83
CHRNB4-204ENST00000559849 HMGB3O15347 200 aaKnown RBP9.84□□□□□ -0.83
CHRNB4-204ENST00000559849 STAG3L2P0CL84 134 aa9.84□□□□□ -0.83
CHRNB4-204ENST00000559849 STAG3L3P0CL85 134 aa9.84□□□□□ -0.83
CHRNB4-204ENST00000559849 CT45A10P0DMU9 189 aa9.84□□□□□ -0.83
CHRNB4-204ENST00000559849 S100A2P29034 98 aa9.84□□□□□ -0.83
CHRNB4-204ENST00000559849 CSN1S1P47710 185 aa9.84□□□□□ -0.83
CHRNB4-204ENST00000559849 NANOS2P60321 138 aaKnown RBP9.84□□□□□ -0.83
CHRNB4-204ENST00000559849 RRN3P1Q2M238 152 aa9.84□□□□□ -0.83
CHRNB4-204ENST00000559849 DPPA3Q6W0C5 159 aa9.84□□□□□ -0.83
CHRNB4-204ENST00000559849 ACTR3CQ9C0K3 210 aaPredicted RBP9.84□□□□□ -0.83
CHRNB4-204ENST00000559849 Q9H3A6 140 aa9.84□□□□□ -0.83
CHRNB4-204ENST00000559849 NUPR2A6NF83 97 aa9.84□□□□□ -0.83
CHRNB4-204ENST00000559849 HOXA5P20719 270 aa9.84□□□□□ -0.83
CHRNB4-204ENST00000559849 C9orf47Q6ZRZ4 202 aa9.84□□□□□ -0.83
CHRNB4-204ENST00000559849 TMEM256Q8N2U0 113 aa9.84□□□□□ -0.83
CHRNB4-204ENST00000559849 ARL14EPLP0DKL9 152 aa9.83□□□□□ -0.84
CHRNB4-204ENST00000559849 RAB5AP20339 215 aa9.83□□□□□ -0.84
CHRNB4-204ENST00000559849 AGPAT4-IT1Q9H0P7 198 aa9.83□□□□□ -0.84
CHRNB4-204ENST00000559849 LEPP41159 167 aa9.83□□□□□ -0.84
CHRNB4-204ENST00000559849 SRSF3P84103 164 aaKnown RBP9.83□□□□□ -0.84
CHRNB4-204ENST00000559849 ERCC8Q13216 396 aa9.83□□□□□ -0.84
CHRNB4-204ENST00000559849 CEMP1Q6PRD7 247 aaPredicted RBP9.83□□□□□ -0.84
CHRNB4-204ENST00000559849 PHLDA1Q8WV24 401 aaPredicted RBP9.83□□□□□ -0.84
CHRNB4-204ENST00000559849 C20orf144Q9BQM9 153 aa9.83□□□□□ -0.84
CHRNB4-204ENST00000559849 LOC102723971A0A1B0GUV8 181 aa9.82□□□□□ -0.84
CHRNB4-204ENST00000559849 PGPA6NDG6 321 aa9.82□□□□□ -0.84
CHRNB4-204ENST00000559849 SFTA3P0C7M3 94 aa9.82□□□□□ -0.84
CHRNB4-204ENST00000559849 EMP1P54849 157 aa9.82□□□□□ -0.84
CHRNB4-204ENST00000559849 TMEM78Q5T7P6 136 aa9.82□□□□□ -0.84
CHRNB4-204ENST00000559849 LINC01587Q99440 93 aa9.82□□□□□ -0.84
CHRNB4-204ENST00000559849 OTORQ9NRC9 128 aa9.82□□□□□ -0.84
CHRNB4-204ENST00000559849 IGKV2-40A0A087WW87 121 aaPredicted RBP9.81□□□□□ -0.84
CHRNB4-204ENST00000559849 A0A1B0GV50 99 aa9.81□□□□□ -0.84
CHRNB4-204ENST00000559849 RBAKDNA6NC62 111 aa9.81□□□□□ -0.84
CHRNB4-204ENST00000559849 CXorf1O96002 111 aa9.81□□□□□ -0.84
CHRNB4-204ENST00000559849 IGKV2D-40P01614 121 aaPredicted RBP9.81□□□□□ -0.84
CHRNB4-204ENST00000559849 KIR3DS1Q14943 382 aa9.81□□□□□ -0.84
CHRNB4-204ENST00000559849 RHEBQ15382 184 aa9.81□□□□□ -0.84
CHRNB4-204ENST00000559849 CMTM2Q8TAZ6 248 aa9.81□□□□□ -0.84
CHRNB4-204ENST00000559849 KLK5Q9Y337 293 aaPredicted RBP9.81□□□□□ -0.84
CHRNB4-204ENST00000559849 H7BYZ3 331 aa9.81□□□□□ -0.84
CHRNB4-204ENST00000559849 SLC25A5P05141 298 aaKnown RBP9.81□□□□□ -0.84
CHRNB4-204ENST00000559849 SPART-AS1P0CW21 52 aa9.81□□□□□ -0.84
CHRNB4-204ENST00000559849 GFI1BQ5VTD9 330 aa9.81□□□□□ -0.84
CHRNB4-204ENST00000559849 VGLL1Q99990 258 aa9.81□□□□□ -0.84
CHRNB4-204ENST00000559849 SMDT1Q9H4I9 107 aa9.81□□□□□ -0.84
CHRNB4-204ENST00000559849 ZNF705GA8MUZ8 300 aaPredicted RBP9.8□□□□□ -0.84
CHRNB4-204ENST00000559849 C11orf94C9JXX5 98 aa9.8□□□□□ -0.84
CHRNB4-204ENST00000559849 GCHFRP30047 84 aa9.8□□□□□ -0.84
CHRNB4-204ENST00000559849 FAM19A4Q96LR4 140 aa9.8□□□□□ -0.84
CHRNB4-204ENST00000559849 TMEM167BQ9NRX6 74 aa9.8□□□□□ -0.84
CHRNB4-204ENST00000559849 ZNF492Q9P255 531 aa9.8□□□□□ -0.84
CHRNB4-204ENST00000559849 CELA1Q9UNI1 258 aa9.8□□□□□ -0.84
CHRNB4-204ENST00000559849 CTXND1A0A1B0GTU2 59 aa9.79□□□□□ -0.84
CHRNB4-204ENST00000559849 TEX48A0A1B0GUV7 120 aa9.79□□□□□ -0.84
CHRNB4-204ENST00000559849 DIRC3C9JPN6 131 aa9.79□□□□□ -0.84
CHRNB4-204ENST00000559849 J3KRW8 73 aa9.79□□□□□ -0.84
CHRNB4-204ENST00000559849 HTN1P15515 57 aa9.79□□□□□ -0.84
CHRNB4-204ENST00000559849 YTHDF2Q9Y5A9 579 aaKnown RBP9.79□□□□□ -0.84
CHRNB4-204ENST00000559849 PRM2P04554 102 aa9.79□□□□□ -0.84
CHRNB4-204ENST00000559849 ZNF138P52744 262 aa9.79□□□□□ -0.84
CHRNB4-204ENST00000559849 CCL20P78556 96 aa9.79□□□□□ -0.84
CHRNB4-204ENST00000559849 ZNF726P1Q15940 193 aa9.79□□□□□ -0.84
CHRNB4-204ENST00000559849 SSX7Q7RTT5 188 aa9.79□□□□□ -0.84
CHRNB4-204ENST00000559849 NIPSNAP3BQ9BS92 247 aa9.79□□□□□ -0.84
CHRNB4-204ENST00000559849 RPS10P5Q9NQ39 176 aa9.79□□□□□ -0.84
CHRNB4-204ENST00000559849 DKK2Q9UBU2 259 aa9.79□□□□□ -0.84
CHRNB4-204ENST00000559849 LYSTQ99698 3801 aa9.79□□□□□ -0.84
CHRNB4-204ENST00000559849 TRAV1-1A0A0B4J248 108 aa9.78□□□□□ -0.84
CHRNB4-204ENST00000559849 TRAV12-3A0A0B4J271 114 aa9.78□□□□□ -0.84
CHRNB4-204ENST00000559849 TRBV7-9A0A0J9YWB2 115 aa9.78□□□□□ -0.84
CHRNB4-204ENST00000559849 KLLNB2CW77 178 aa9.78□□□□□ -0.84
CHRNB4-204ENST00000559849 GPX1P07203 203 aa9.78□□□□□ -0.84
CHRNB4-204ENST00000559849 CRISP2P16562 243 aa9.78□□□□□ -0.84
CHRNB4-204ENST00000559849 AZU1P20160 251 aa9.78□□□□□ -0.84
CHRNB4-204ENST00000559849 COTL1Q14019 142 aa9.78□□□□□ -0.84
CHRNB4-204ENST00000559849 C12orf74Q32Q52 190 aa9.78□□□□□ -0.84
CHRNB4-204ENST00000559849 FAM222AQ5U5X8 452 aa9.78□□□□□ -0.84
CHRNB4-204ENST00000559849 Q6ZTC4 211 aa9.78□□□□□ -0.84
CHRNB4-204ENST00000559849 MBD3L1Q8WWY6 194 aa9.78□□□□□ -0.84
CHRNB4-204ENST00000559849 ZNF493Q6ZR52 646 aa9.78□□□□□ -0.84
CHRNB4-204ENST00000559849 PLECQ15149 4684 aaKnown RBP9.77□□□□□ -0.84
CHRNB4-204ENST00000559849 C7orf77A4D0Y5 90 aa9.77□□□□□ -0.85
CHRNB4-204ENST00000559849 C7orf71A4D174 169 aa9.77□□□□□ -0.85
CHRNB4-204ENST00000559849 PYGO2Q9BRQ0 406 aa9.77□□□□□ -0.85
CHRNB4-204ENST00000559849 EIF5A2Q9GZV4 153 aaKnown RBP9.77□□□□□ -0.85
CHRNB4-204ENST00000559849 LENEPQ9Y5L5 61 aa9.77□□□□□ -0.85
CHRNB4-204ENST00000559849 TRAV10A0A0B4J240 114 aa9.76□□□□□ -0.85
CHRNB4-204ENST00000559849 MAP1LC3B2A6NCE7 125 aa9.76□□□□□ -0.85
CHRNB4-204ENST00000559849 IFITM10A6NMD0 228 aa9.76□□□□□ -0.85
CHRNB4-204ENST00000559849 RNASE4P34096 147 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms