RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 RANP62826 216 aaKnown RBP8.47□□□□□ -1.05
SPG11-219ENST00000559822 FFAR4Q5NUL3 377 aa8.47□□□□□ -1.05
SPG11-219ENST00000559822 PHYHIPLQ96FC7 376 aa8.47□□□□□ -1.05
SPG11-219ENST00000559822 VSIG2Q96IQ7 327 aa8.47□□□□□ -1.05
SPG11-219ENST00000559822 PRO0255Q9UI72 69 aa8.47□□□□□ -1.05
SPG11-219ENST00000559822 HSPB11Q9Y547 144 aa8.47□□□□□ -1.05
SPG11-219ENST00000559822 LENEPQ9Y5L5 61 aa8.47□□□□□ -1.05
SPG11-219ENST00000559822 SIVA1O15304 175 aa8.46□□□□□ -1.06
SPG11-219ENST00000559822 ZNF266Q14584 549 aa8.46□□□□□ -1.06
SPG11-219ENST00000559822 FAM74A1Q5RGS3 127 aa8.46□□□□□ -1.06
SPG11-219ENST00000559822 PRR9Q5T870 116 aa8.46□□□□□ -1.06
SPG11-219ENST00000559822 Q8TAT8 98 aa8.46□□□□□ -1.06
SPG11-219ENST00000559822 MARVELD1Q9BSK0 173 aa8.46□□□□□ -1.06
SPG11-219ENST00000559822 KRTAP1-5Q9BYS1 174 aa8.46□□□□□ -1.06
SPG11-219ENST00000559822 MRPL16Q9NX20 251 aaKnown RBP8.46□□□□□ -1.06
SPG11-219ENST00000559822 PTTG2Q9NZH5 202 aa8.46□□□□□ -1.06
SPG11-219ENST00000559822 MPC2O95563 127 aa8.45□□□□□ -1.06
SPG11-219ENST00000559822 IGHV3-53P01767 116 aa8.45□□□□□ -1.06
SPG11-219ENST00000559822 H2BFSP57053 126 aa8.45□□□□□ -1.06
SPG11-219ENST00000559822 SPATA12Q7Z6I5 190 aa8.45□□□□□ -1.06
SPG11-219ENST00000559822 TMED6Q8WW62 240 aa8.45□□□□□ -1.06
SPG11-219ENST00000559822 SPXQ9BT56 116 aa8.45□□□□□ -1.06
SPG11-219ENST00000559822 TP53TG3Q9ULZ0 132 aa8.45□□□□□ -1.06
SPG11-219ENST00000559822 HHLA3Q9XRX5 114 aa8.45□□□□□ -1.06
SPG11-219ENST00000559822 TRGV11A0A075B6L2 103 aa8.44□□□□□ -1.06
SPG11-219ENST00000559822 DIRC3C9JPN6 131 aa8.44□□□□□ -1.06
SPG11-219ENST00000559822 RPL12P30050 165 aaKnown RBP8.44□□□□□ -1.06
SPG11-219ENST00000559822 MRPL23Q16540 153 aaKnown RBP8.44□□□□□ -1.06
SPG11-219ENST00000559822 Q6AWC8 147 aa8.44□□□□□ -1.06
SPG11-219ENST00000559822 FAM159AQ6UWV7 190 aa8.44□□□□□ -1.06
SPG11-219ENST00000559822 CMTM2Q8TAZ6 248 aa8.44□□□□□ -1.06
SPG11-219ENST00000559822 OTORQ9NRC9 128 aa8.44□□□□□ -1.06
SPG11-219ENST00000559822 TRGV4A0A0C4DH28 118 aa8.43□□□□□ -1.06
SPG11-219ENST00000559822 A0A1W2PPV4 95 aa8.43□□□□□ -1.06
SPG11-219ENST00000559822 EREGO14944 169 aa8.43□□□□□ -1.06
SPG11-219ENST00000559822 NXPH4O95158 308 aa8.43□□□□□ -1.06
SPG11-219ENST00000559822 CRYBA4P53673 196 aa8.43□□□□□ -1.06
SPG11-219ENST00000559822 LINC00315P59091 139 aa8.43□□□□□ -1.06
SPG11-219ENST00000559822 IFITM3Q01628 133 aa8.43□□□□□ -1.06
SPG11-219ENST00000559822 ACOT6Q3I5F7 207 aaPredicted RBP8.43□□□□□ -1.06
SPG11-219ENST00000559822 MUC21Q5SSG8 566 aa8.43□□□□□ -1.06
SPG11-219ENST00000559822 PQLC2Q6ZP29 291 aa8.43□□□□□ -1.06
SPG11-219ENST00000559822 ARL6IP6Q8N6S5 226 aa8.43□□□□□ -1.06
SPG11-219ENST00000559822 PCNPQ8WW12 178 aaKnown RBP8.43□□□□□ -1.06
SPG11-219ENST00000559822 SMIM3Q9BZL3 60 aa8.43□□□□□ -1.06
SPG11-219ENST00000559822 TRAV9-2A0A087WT02 112 aa8.42□□□□□ -1.06
SPG11-219ENST00000559822 TMEM183BQ1AE95 376 aa8.42□□□□□ -1.06
SPG11-219ENST00000559822 Q6ZQT7 251 aa8.42□□□□□ -1.06
SPG11-219ENST00000559822 NEGR1Q7Z3B1 354 aa8.42□□□□□ -1.06
SPG11-219ENST00000559822 NFE4Q86UQ8 179 aa8.42□□□□□ -1.06
SPG11-219ENST00000559822 IQCF2Q8IXL9 164 aa8.42□□□□□ -1.06
SPG11-219ENST00000559822 TMEM183AQ8IXX5 376 aa8.42□□□□□ -1.06
SPG11-219ENST00000559822 MAPKAPK5-AS1Q8N8E1 139 aa8.42□□□□□ -1.06
SPG11-219ENST00000559822 HYLS1Q96M11 299 aa8.42□□□□□ -1.06
SPG11-219ENST00000559822 C8orf49Q96NF6 230 aa8.42□□□□□ -1.06
SPG11-219ENST00000559822 MBD2Q9UBB5 411 aa8.42□□□□□ -1.06
SPG11-219ENST00000559822 PGPA6NDG6 321 aa8.41□□□□□ -1.06
SPG11-219ENST00000559822 A6NHS1 94 aa8.41□□□□□ -1.06
SPG11-219ENST00000559822 K7EP13 123 aa8.41□□□□□ -1.06
SPG11-219ENST00000559822 ORM1P02763 201 aa8.41□□□□□ -1.06
SPG11-219ENST00000559822 SRIP30626 198 aa8.41□□□□□ -1.06
SPG11-219ENST00000559822 FHL2Q14192 279 aa8.41□□□□□ -1.06
SPG11-219ENST00000559822 OR10G4Q8NGN3 311 aa8.41□□□□□ -1.06
SPG11-219ENST00000559822 RASL10AQ92737 203 aa8.41□□□□□ -1.06
SPG11-219ENST00000559822 RPH3ALQ9UNE2 315 aa8.41□□□□□ -1.06
SPG11-219ENST00000559822 TRAV21A0A0B4J279 112 aa8.4□□□□□ -1.06
SPG11-219ENST00000559822 ERVFC1-1P60608 527 aa8.4□□□□□ -1.06
SPG11-219ENST00000559822 TDRG1Q3Y452 100 aa8.4□□□□□ -1.06
SPG11-219ENST00000559822 LYPD5Q6UWN5 251 aa8.4□□□□□ -1.06
SPG11-219ENST00000559822 MDFICQ9P1T7 246 aa8.4□□□□□ -1.06
SPG11-219ENST00000559822 NAGKQ9UJ70 344 aa8.4□□□□□ -1.06
SPG11-219ENST00000559822 LY96Q9Y6Y9 160 aa8.4□□□□□ -1.06
SPG11-219ENST00000559822 TRAV4A0A0B4J268 109 aa8.39□□□□□ -1.07
SPG11-219ENST00000559822 SERTM2A0A1B0GWG4 89 aa8.39□□□□□ -1.07
SPG11-219ENST00000559822 C9JCJ5 164 aa8.39□□□□□ -1.07
SPG11-219ENST00000559822 K7EQD1 137 aa8.39□□□□□ -1.07
SPG11-219ENST00000559822 M0R2P5 195 aa8.39□□□□□ -1.07
SPG11-219ENST00000559822 GOLT1AQ6ZVE7 132 aa8.39□□□□□ -1.07
SPG11-219ENST00000559822 ZNF479Q96JC4 524 aa8.39□□□□□ -1.07
SPG11-219ENST00000559822 KCNS1Q96KK3 526 aa8.39□□□□□ -1.07
SPG11-219ENST00000559822 TXNDC17Q9BRA2 123 aa8.39□□□□□ -1.07
SPG11-219ENST00000559822 NDFIP1Q9BT67 221 aa8.39□□□□□ -1.07
SPG11-219ENST00000559822 SDF2L1Q9HCN8 221 aa8.39□□□□□ -1.07
SPG11-219ENST00000559822 SFTA3P0C7M3 94 aa8.38□□□□□ -1.07
SPG11-219ENST00000559822 GYPEP15421 78 aa8.38□□□□□ -1.07
SPG11-219ENST00000559822 EVI2AP22794 236 aa8.38□□□□□ -1.07
SPG11-219ENST00000559822 KRTAP10-2P60368 255 aa8.38□□□□□ -1.07
SPG11-219ENST00000559822 RAB2AP61019 212 aa8.38□□□□□ -1.07
SPG11-219ENST00000559822 Q6ZRN7 208 aaPredicted RBP8.38□□□□□ -1.07
SPG11-219ENST00000559822 SH2D6Q7Z4S9 175 aa8.38□□□□□ -1.07
SPG11-219ENST00000559822 OR4C5Q8NGB2 326 aa8.38□□□□□ -1.07
SPG11-219ENST00000559822 OR10G9Q8NGN4 311 aa8.38□□□□□ -1.07
SPG11-219ENST00000559822 OR10G7Q8NGN6 311 aa8.38□□□□□ -1.07
SPG11-219ENST00000559822 TREM1Q9NP99 234 aa8.38□□□□□ -1.07
SPG11-219ENST00000559822 PGPEP1Q9NXJ5 209 aa8.38□□□□□ -1.07
SPG11-219ENST00000559822 PCLOQ9Y6V0 5065 aa8.37□□□□□ -1.07
SPG11-219ENST00000559822 K7EQM0 130 aa8.37□□□□□ -1.07
SPG11-219ENST00000559822 CDC34P49427 236 aaPredicted RBP8.37□□□□□ -1.07
SPG11-219ENST00000559822 CDPF1Q6NVV7 123 aa8.37□□□□□ -1.07
SPG11-219ENST00000559822 Q8N1X5 172 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms