RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 FBLL1A6NHQ2 334 aaKnown RBP12.81□□□□□ -0.36
CHRNA3-206ENST00000559658 ZNF705GA8MUZ8 300 aaPredicted RBP12.81□□□□□ -0.36
CHRNA3-206ENST00000559658 FXYD7P58549 80 aa12.81□□□□□ -0.36
CHRNA3-206ENST00000559658 C9orf66Q5T8R8 295 aa12.81□□□□□ -0.36
CHRNA3-206ENST00000559658 EBLN2Q6P2I7 272 aa12.81□□□□□ -0.36
CHRNA3-206ENST00000559658 AMTNQ6UX39 209 aa12.81□□□□□ -0.36
CHRNA3-206ENST00000559658 FAM231DQ6ZW35 169 aa12.81□□□□□ -0.36
CHRNA3-206ENST00000559658 ANAPC16Q96DE5 110 aa12.81□□□□□ -0.36
CHRNA3-206ENST00000559658 NDFIP1Q9BT67 221 aa12.81□□□□□ -0.36
CHRNA3-206ENST00000559658 PPP1R14DQ9NXH3 145 aa12.81□□□□□ -0.36
CHRNA3-206ENST00000559658 C11orf21Q9P2W6 132 aa12.81□□□□□ -0.36
CHRNA3-206ENST00000559658 H3BMM0 161 aa12.8□□□□□ -0.36
CHRNA3-206ENST00000559658 GZMBP10144 247 aa12.8□□□□□ -0.36
CHRNA3-206ENST00000559658 HLA-DRB4P13762 266 aa12.8□□□□□ -0.36
CHRNA3-206ENST00000559658 TCL1AP56279 114 aa12.8□□□□□ -0.36
CHRNA3-206ENST00000559658 FAM3BP58499 235 aaPredicted RBP12.8□□□□□ -0.36
CHRNA3-206ENST00000559658 SMUG1Q53HV7 270 aa12.8□□□□□ -0.36
CHRNA3-206ENST00000559658 OR2K2Q8NGT1 345 aa12.8□□□□□ -0.36
CHRNA3-206ENST00000559658 SMCO4Q9NRQ5 59 aa12.8□□□□□ -0.36
CHRNA3-206ENST00000559658 HLA-DRB4X5D2U9 266 aa12.8□□□□□ -0.36
CHRNA3-206ENST00000559658 TRAV12-2A0A075B6T6 113 aa12.8□□□□□ -0.36
CHRNA3-206ENST00000559658 SPINK13Q1W4C9 94 aa12.8□□□□□ -0.36
CHRNA3-206ENST00000559658 C15orf54Q8N8G6 183 aa12.8□□□□□ -0.36
CHRNA3-206ENST00000559658 CTDSP1Q9GZU7 261 aa12.8□□□□□ -0.36
CHRNA3-206ENST00000559658 TMSB15BA0A087X1C1 80 aa12.79□□□□□ -0.36
CHRNA3-206ENST00000559658 TGIF2-C20orf24A0A0A6YYL0 155 aa12.79□□□□□ -0.36
CHRNA3-206ENST00000559658 OR11H12B2RN74 326 aa12.79□□□□□ -0.36
CHRNA3-206ENST00000559658 P01737 135 aa12.79□□□□□ -0.36
CHRNA3-206ENST00000559658 CXCL1P09341 107 aa12.79□□□□□ -0.36
CHRNA3-206ENST00000559658 ELOBQ15370 118 aa12.79□□□□□ -0.36
CHRNA3-206ENST00000559658 FAM162BQ5T6X4 162 aa12.79□□□□□ -0.36
CHRNA3-206ENST00000559658 ZNF575Q86XF7 245 aa12.79□□□□□ -0.36
CHRNA3-206ENST00000559658 TMEM242Q9NWH2 141 aa12.79□□□□□ -0.36
CHRNA3-206ENST00000559658 GATCO43716 136 aaKnown RBP12.78□□□□□ -0.36
CHRNA3-206ENST00000559658 RPP21Q9H633 154 aaKnown RBP12.78□□□□□ -0.36
CHRNA3-206ENST00000559658 PFN1P07737 140 aaKnown RBP12.78□□□□□ -0.36
CHRNA3-206ENST00000559658 CRISP2P16562 243 aa12.78□□□□□ -0.36
CHRNA3-206ENST00000559658 RNASE4P34096 147 aaKnown RBP12.78□□□□□ -0.36
CHRNA3-206ENST00000559658 OXLD1Q5BKU9 147 aa12.78□□□□□ -0.36
CHRNA3-206ENST00000559658 COLCA2A8K830 154 aa12.77□□□□□ -0.37
CHRNA3-206ENST00000559658 KLLNB2CW77 178 aa12.77□□□□□ -0.37
CHRNA3-206ENST00000559658 PPP1R2P9O14990 202 aa12.77□□□□□ -0.37
CHRNA3-206ENST00000559658 OR2D3Q8NGH3 330 aa12.77□□□□□ -0.37
CHRNA3-206ENST00000559658 LENEPQ9Y5L5 61 aa12.77□□□□□ -0.37
CHRNA3-206ENST00000559658 A8MTW9 85 aa12.76□□□□□ -0.37
CHRNA3-206ENST00000559658 GPX1P07203 203 aa12.76□□□□□ -0.37
CHRNA3-206ENST00000559658 INSL3P51460 131 aa12.76□□□□□ -0.37
CHRNA3-206ENST00000559658 GFI1BQ5VTD9 330 aa12.76□□□□□ -0.37
CHRNA3-206ENST00000559658 GTSF1Q8WW33 167 aa12.76□□□□□ -0.37
CHRNA3-206ENST00000559658 DAZAP1Q96EP5 407 aaKnown RBP12.76□□□□□ -0.37
CHRNA3-206ENST00000559658 IL36BQ9NZH7 164 aa12.76□□□□□ -0.37
CHRNA3-206ENST00000559658 A0A1W2PPQ1 181 aa12.76□□□□□ -0.37
CHRNA3-206ENST00000559658 FRMD6-AS1P0C7T7 363 aa12.76□□□□□ -0.37
CHRNA3-206ENST00000559658 RBMY1A1P0DJD3 496 aaKnown RBP12.76□□□□□ -0.37
CHRNA3-206ENST00000559658 RBMY1CP0DJD4 496 aa12.76□□□□□ -0.37
CHRNA3-206ENST00000559658 RBMY1FQ15415 496 aaKnown RBP12.76□□□□□ -0.37
CHRNA3-206ENST00000559658 IGKV3D-20A0A0C4DH25 116 aa12.75□□□□□ -0.37
CHRNA3-206ENST00000559658 SPINK4O60575 86 aa12.75□□□□□ -0.37
CHRNA3-206ENST00000559658 DUSP14O95147 198 aaKnown RBP12.75□□□□□ -0.37
CHRNA3-206ENST00000559658 DEFB125Q8N687 156 aa12.75□□□□□ -0.37
CHRNA3-206ENST00000559658 NEU1Q99519 415 aa12.75□□□□□ -0.37
CHRNA3-206ENST00000559658 TUBA4BQ9H853 241 aa12.75□□□□□ -0.37
CHRNA3-206ENST00000559658 BIN3Q9NQY0 253 aa12.75□□□□□ -0.37
CHRNA3-206ENST00000559658 CXorf65A6NEN9 183 aa12.74□□□□□ -0.37
CHRNA3-206ENST00000559658 CRXO43186 299 aaPredicted RBP12.74□□□□□ -0.37
CHRNA3-206ENST00000559658 NAGKQ9UJ70 344 aa12.74□□□□□ -0.37
CHRNA3-206ENST00000559658 TRAV12-3A0A0B4J271 114 aa12.74□□□□□ -0.37
CHRNA3-206ENST00000559658 SMIM27A0A1W2PRY6 76 aa12.74□□□□□ -0.37
CHRNA3-206ENST00000559658 FABP5P3A8MUU1 101 aa12.74□□□□□ -0.37
CHRNA3-206ENST00000559658 MUC21Q5SSG8 566 aa12.74□□□□□ -0.37
CHRNA3-206ENST00000559658 TRPT1Q86TN4 253 aaKnown RBP12.74□□□□□ -0.37
CHRNA3-206ENST00000559658 ODF3Q96PU9 254 aa12.74□□□□□ -0.37
CHRNA3-206ENST00000559658 MCRIP2Q9BUT9 160 aaKnown RBP12.74□□□□□ -0.37
CHRNA3-206ENST00000559658 GRIFINA4D1Z8 144 aa12.73□□□□□ -0.37
CHRNA3-206ENST00000559658 WIPF1O43516 503 aa12.73□□□□□ -0.37
CHRNA3-206ENST00000559658 ORM1P02763 201 aa12.73□□□□□ -0.37
CHRNA3-206ENST00000559658 CDKN1BP46527 198 aa12.73□□□□□ -0.37
CHRNA3-206ENST00000559658 PRR31Q5SQ13 230 aa12.73□□□□□ -0.37
CHRNA3-206ENST00000559658 TSKUQ8WUA8 353 aa12.73□□□□□ -0.37
CHRNA3-206ENST00000559658 TRBV7-9A0A0J9YWB2 115 aa12.72□□□□□ -0.37
CHRNA3-206ENST00000559658 LEPP41159 167 aa12.72□□□□□ -0.37
CHRNA3-206ENST00000559658 Q6AWC8 147 aa12.72□□□□□ -0.37
CHRNA3-206ENST00000559658 STHQ8IWL8 128 aa12.72□□□□□ -0.37
CHRNA3-206ENST00000559658 C7orf71A4D174 169 aa12.72□□□□□ -0.37
CHRNA3-206ENST00000559658 TMEM189A5PLL7 270 aa12.72□□□□□ -0.37
CHRNA3-206ENST00000559658 HIGD1CA8MV81 97 aa12.72□□□□□ -0.37
CHRNA3-206ENST00000559658 KRTAP10-11P60412 298 aa12.72□□□□□ -0.37
CHRNA3-206ENST00000559658 LINC01559Q495D7 138 aa12.72□□□□□ -0.37
CHRNA3-206ENST00000559658 MUC21A0A0G2JKD1 596 aa12.71□□□□□ -0.37
CHRNA3-206ENST00000559658 MUC21A0A140T8X8 626 aa12.71□□□□□ -0.37
CHRNA3-206ENST00000559658 ZNF324O75467 553 aaPredicted RBP12.71□□□□□ -0.37
CHRNA3-206ENST00000559658 RPL35AP18077 110 aaKnown RBP12.71□□□□□ -0.37
CHRNA3-206ENST00000559658 CT83Q5H943 113 aa12.71□□□□□ -0.37
CHRNA3-206ENST00000559658 NUP35Q8NFH5 326 aa12.71□□□□□ -0.37
CHRNA3-206ENST00000559658 PRM2P04554 102 aa12.7□□□□□ -0.38
CHRNA3-206ENST00000559658 ANXA2RQ3ZCQ2 193 aa12.7□□□□□ -0.38
CHRNA3-206ENST00000559658 PGLYRP4Q96LB8 373 aa12.7□□□□□ -0.38
CHRNA3-206ENST00000559658 IMMP2LQ96T52 175 aa12.7□□□□□ -0.38
CHRNA3-206ENST00000559658 FAM110AQ9BQ89 295 aa12.7□□□□□ -0.38
CHRNA3-206ENST00000559658 NOTCH1P46531 2555 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms