RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 ZNF415Q09FC8 603 aa10.27□□□□□ -0.77
LRRC28-213ENST00000559399 Q6ZQT7 251 aa10.27□□□□□ -0.77
LRRC28-213ENST00000559399 UPK1BO75841 260 aa10.26□□□□□ -0.77
LRRC28-213ENST00000559399 LINC00315P59091 139 aa10.26□□□□□ -0.77
LRRC28-213ENST00000559399 UBE2L3P68036 154 aaKnown RBP10.26□□□□□ -0.77
LRRC28-213ENST00000559399 SLAQ13239 276 aa10.26□□□□□ -0.77
LRRC28-213ENST00000559399 LYPD1Q8N2G4 141 aa10.26□□□□□ -0.77
LRRC28-213ENST00000559399 ATP5SQ99766 215 aa10.26□□□□□ -0.77
LRRC28-213ENST00000559399 PRO0255Q9UI72 69 aa10.26□□□□□ -0.77
LRRC28-213ENST00000559399 RBAKDNA6NC62 111 aa10.25□□□□□ -0.77
LRRC28-213ENST00000559399 SIVA1O15304 175 aa10.25□□□□□ -0.77
LRRC28-213ENST00000559399 NXPH4O95158 308 aa10.25□□□□□ -0.77
LRRC28-213ENST00000559399 KRTAP10-2P60368 255 aa10.25□□□□□ -0.77
LRRC28-213ENST00000559399 RANP62826 216 aaKnown RBP10.25□□□□□ -0.77
LRRC28-213ENST00000559399 ZNF266Q14584 549 aa10.25□□□□□ -0.77
LRRC28-213ENST00000559399 PPP1R1CQ8WVI7 109 aa10.25□□□□□ -0.77
LRRC28-213ENST00000559399 INMT-MINDY4F8WBC2 141 aa10.24□□□□□ -0.77
LRRC28-213ENST00000559399 PET100P0DJ07 73 aa10.24□□□□□ -0.77
LRRC28-213ENST00000559399 CRYBA4P53673 196 aa10.24□□□□□ -0.77
LRRC28-213ENST00000559399 H2BFSP57053 126 aa10.24□□□□□ -0.77
LRRC28-213ENST00000559399 KHDC3LQ587J8 217 aa10.24□□□□□ -0.77
LRRC28-213ENST00000559399 FFAR4Q5NUL3 377 aa10.24□□□□□ -0.77
LRRC28-213ENST00000559399 MUC21Q5SSG8 566 aa10.24□□□□□ -0.77
LRRC28-213ENST00000559399 C8orf49Q96NF6 230 aa10.24□□□□□ -0.77
LRRC28-213ENST00000559399 HHLA3Q9XRX5 114 aa10.24□□□□□ -0.77
LRRC28-213ENST00000559399 TAS2R45P59539 299 aa10.23□□□□□ -0.77
LRRC28-213ENST00000559399 FHL2Q14192 279 aa10.23□□□□□ -0.77
LRRC28-213ENST00000559399 Q6ZRN7 208 aaPredicted RBP10.23□□□□□ -0.77
LRRC28-213ENST00000559399 HSPB11Q9Y547 144 aa10.23□□□□□ -0.77
LRRC28-213ENST00000559399 IFNA5P01569 189 aa10.22□□□□□ -0.77
LRRC28-213ENST00000559399 IFITM3Q01628 133 aa10.22□□□□□ -0.77
LRRC28-213ENST00000559399 MRPL23Q16540 153 aaKnown RBP10.22□□□□□ -0.77
LRRC28-213ENST00000559399 Q6AWC8 147 aa10.22□□□□□ -0.77
LRRC28-213ENST00000559399 SCGB1C1Q8TD33 95 aa10.22□□□□□ -0.77
LRRC28-213ENST00000559399 MDFICQ9P1T7 246 aa10.22□□□□□ -0.77
LRRC28-213ENST00000559399 LENEPQ9Y5L5 61 aa10.22□□□□□ -0.77
LRRC28-213ENST00000559399 TRGV11A0A075B6L2 103 aa10.21□□□□□ -0.77
LRRC28-213ENST00000559399 TRGV4A0A0C4DH28 118 aa10.21□□□□□ -0.77
LRRC28-213ENST00000559399 DIRC3C9JPN6 131 aa10.21□□□□□ -0.77
LRRC28-213ENST00000559399 SSNA1O43805 119 aa10.21□□□□□ -0.77
LRRC28-213ENST00000559399 MPC2O95563 127 aa10.21□□□□□ -0.77
LRRC28-213ENST00000559399 LYPD5Q6UWN5 251 aa10.21□□□□□ -0.77
LRRC28-213ENST00000559399 FAM159AQ6UWV7 190 aa10.21□□□□□ -0.77
LRRC28-213ENST00000559399 NEGR1Q7Z3B1 354 aa10.21□□□□□ -0.77
LRRC28-213ENST00000559399 Q8N1X5 172 aa10.21□□□□□ -0.77
LRRC28-213ENST00000559399 HYLS1Q96M11 299 aa10.21□□□□□ -0.77
LRRC28-213ENST00000559399 MARVELD1Q9BSK0 173 aa10.21□□□□□ -0.77
LRRC28-213ENST00000559399 SMIM3Q9BZL3 60 aa10.21□□□□□ -0.77
LRRC28-213ENST00000559399 RPL12P30050 165 aaKnown RBP10.2□□□□□ -0.78
LRRC28-213ENST00000559399 SRIP30626 198 aa10.2□□□□□ -0.78
LRRC28-213ENST00000559399 TMEM183BQ1AE95 376 aa10.2□□□□□ -0.78
LRRC28-213ENST00000559399 IQCF2Q8IXL9 164 aa10.2□□□□□ -0.78
LRRC28-213ENST00000559399 TMEM183AQ8IXX5 376 aa10.2□□□□□ -0.78
LRRC28-213ENST00000559399 OR10G4Q8NGN3 311 aa10.2□□□□□ -0.78
LRRC28-213ENST00000559399 CMTM2Q8TAZ6 248 aa10.2□□□□□ -0.78
LRRC28-213ENST00000559399 PCNPQ8WW12 178 aaKnown RBP10.2□□□□□ -0.78
LRRC28-213ENST00000559399 TMED6Q8WW62 240 aa10.2□□□□□ -0.78
LRRC28-213ENST00000559399 RASL10AQ92737 203 aa10.2□□□□□ -0.78
LRRC28-213ENST00000559399 SPXQ9BT56 116 aa10.2□□□□□ -0.78
LRRC28-213ENST00000559399 NAGKQ9UJ70 344 aa10.2□□□□□ -0.78
LRRC28-213ENST00000559399 APOBP04114 4563 aaKnown RBP10.19□□□□□ -0.78
LRRC28-213ENST00000559399 DNAH5Q8TE73 4624 aa10.19□□□□□ -0.78
LRRC28-213ENST00000559399 K7EQD1 137 aa10.19□□□□□ -0.78
LRRC28-213ENST00000559399 EREGO14944 169 aa10.19□□□□□ -0.78
LRRC28-213ENST00000559399 SFTA3P0C7M3 94 aa10.19□□□□□ -0.78
LRRC28-213ENST00000559399 ERVFC1-1P60608 527 aa10.19□□□□□ -0.78
LRRC28-213ENST00000559399 FAM74A1Q5RGS3 127 aa10.19□□□□□ -0.78
LRRC28-213ENST00000559399 NFE4Q86UQ8 179 aa10.19□□□□□ -0.78
LRRC28-213ENST00000559399 ZNF479Q96JC4 524 aa10.19□□□□□ -0.78
LRRC28-213ENST00000559399 SCRT2Q9NQ03 307 aa10.19□□□□□ -0.78
LRRC28-213ENST00000559399 OTORQ9NRC9 128 aa10.19□□□□□ -0.78
LRRC28-213ENST00000559399 TRAV9-2A0A087WT02 112 aa10.18□□□□□ -0.78
LRRC28-213ENST00000559399 EIF3GO75821 320 aaKnown RBP eCLIP10.18□□□□□ -0.78
LRRC28-213ENST00000559399 ORM1P02763 201 aa10.18□□□□□ -0.78
LRRC28-213ENST00000559399 DEFA1P59665 94 aa10.18□□□□□ -0.78
LRRC28-213ENST00000559399 DEFA3P59666 94 aa10.18□□□□□ -0.78
LRRC28-213ENST00000559399 TDRG1Q3Y452 100 aa10.18□□□□□ -0.78
LRRC28-213ENST00000559399 PGPEP1Q9NXJ5 209 aa10.18□□□□□ -0.78
LRRC28-213ENST00000559399 PTTG2Q9NZH5 202 aa10.18□□□□□ -0.78
LRRC28-213ENST00000559399 MBD2Q9UBB5 411 aa10.18□□□□□ -0.78
LRRC28-213ENST00000559399 RPH3ALQ9UNE2 315 aa10.18□□□□□ -0.78
LRRC28-213ENST00000559399 LY96Q9Y6Y9 160 aa10.18□□□□□ -0.78
LRRC28-213ENST00000559399 MUC4Q99102 2169 aa10.18□□□□□ -0.78
LRRC28-213ENST00000559399 PGPA6NDG6 321 aa10.17□□□□□ -0.78
LRRC28-213ENST00000559399 GYPEP15421 78 aa10.17□□□□□ -0.78
LRRC28-213ENST00000559399 ACOT6Q3I5F7 207 aaPredicted RBP10.17□□□□□ -0.78
LRRC28-213ENST00000559399 PQLC2Q6ZP29 291 aa10.17□□□□□ -0.78
LRRC28-213ENST00000559399 GOLT1AQ6ZVE7 132 aa10.17□□□□□ -0.78
LRRC28-213ENST00000559399 TRAV4A0A0B4J268 109 aa10.16□□□□□ -0.78
LRRC28-213ENST00000559399 TRAV21A0A0B4J279 112 aa10.16□□□□□ -0.78
LRRC28-213ENST00000559399 A0A1W2PPV4 95 aa10.16□□□□□ -0.78
LRRC28-213ENST00000559399 C9JCJ5 164 aa10.16□□□□□ -0.78
LRRC28-213ENST00000559399 K7EP13 123 aa10.16□□□□□ -0.78
LRRC28-213ENST00000559399 CDPF1Q6NVV7 123 aa10.16□□□□□ -0.78
LRRC28-213ENST00000559399 ARL6IP6Q8N6S5 226 aa10.16□□□□□ -0.78
LRRC28-213ENST00000559399 TXNDC17Q9BRA2 123 aa10.16□□□□□ -0.78
LRRC28-213ENST00000559399 TNFRSF18Q9Y5U5 241 aa10.16□□□□□ -0.78
LRRC28-213ENST00000559399 IGHV3-16A0A0C4DH30 117 aa10.15□□□□□ -0.78
LRRC28-213ENST00000559399 F6UZH7 168 aa10.15□□□□□ -0.78
LRRC28-213ENST00000559399 M0R2P5 195 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms