RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 C20orf144Q9BQM9 153 aa8.15□□□□□ -1.1
SNX1-204ENST00000559061 ATG101Q9BSB4 218 aa8.15□□□□□ -1.1
SNX1-204ENST00000559061 DKK2Q9UBU2 259 aa8.15□□□□□ -1.1
SNX1-204ENST00000559061 TP53TG3Q9ULZ0 132 aa8.15□□□□□ -1.1
SNX1-204ENST00000559061 HYDINQ4G0P3 5121 aa8.15□□□□□ -1.11
SNX1-204ENST00000559061 TENM2Q9NT68 2774 aa8.14□□□□□ -1.11
SNX1-204ENST00000559061 H7BYZ3 331 aa8.14□□□□□ -1.11
SNX1-204ENST00000559061 PEX7O00628 323 aa8.14□□□□□ -1.11
SNX1-204ENST00000559061 HBE1P02100 147 aa8.14□□□□□ -1.11
SNX1-204ENST00000559061 RAB5CP51148 216 aa8.14□□□□□ -1.11
SNX1-204ENST00000559061 EMP1P54849 157 aa8.14□□□□□ -1.11
SNX1-204ENST00000559061 PMS2P11Q13670 270 aa8.14□□□□□ -1.11
SNX1-204ENST00000559061 RRN3P1Q2M238 152 aa8.14□□□□□ -1.11
SNX1-204ENST00000559061 FAM222AQ5U5X8 452 aa8.14□□□□□ -1.11
SNX1-204ENST00000559061 Q6AWC8 147 aa8.14□□□□□ -1.11
SNX1-204ENST00000559061 Q6ZTC4 211 aa8.14□□□□□ -1.11
SNX1-204ENST00000559061 CYB561D1Q8N8Q1 229 aa8.14□□□□□ -1.11
SNX1-204ENST00000559061 TMEM75Q8N9X5 138 aa8.14□□□□□ -1.11
SNX1-204ENST00000559061 C11orf45Q8TAV5 145 aa8.14□□□□□ -1.11
SNX1-204ENST00000559061 LINC00467Q9BRT7 94 aa8.14□□□□□ -1.11
SNX1-204ENST00000559061 PSG8Q9UQ74 426 aa8.14□□□□□ -1.11
SNX1-204ENST00000559061 LENEPQ9Y5L5 61 aa8.14□□□□□ -1.11
SNX1-204ENST00000559061 ARL2-SNX15V9GYD0 113 aa8.14□□□□□ -1.11
SNX1-204ENST00000559061 VPS13DQ5THJ4 4388 aa8.14□□□□□ -1.11
SNX1-204ENST00000559061 Q86TA4 180 aa8.13□□□□□ -1.11
SNX1-204ENST00000559061 C2CD4CQ8TF44 421 aa8.13□□□□□ -1.11
SNX1-204ENST00000559061 TMEM208Q9BTX3 173 aa8.13□□□□□ -1.11
SNX1-204ENST00000559061 C11orf21Q9P2W6 132 aa8.13□□□□□ -1.11
SNX1-204ENST00000559061 SERTM2A0A1B0GWG4 89 aa8.12□□□□□ -1.11
SNX1-204ENST00000559061 SCO2A0A1W2PP80 73 aa8.12□□□□□ -1.11
SNX1-204ENST00000559061 GPX1P07203 203 aa8.12□□□□□ -1.11
SNX1-204ENST00000559061 FLI1Q01543 452 aaPredicted RBP8.12□□□□□ -1.11
SNX1-204ENST00000559061 EIF5AL1Q6IS14 154 aaKnown RBP8.12□□□□□ -1.11
SNX1-204ENST00000559061 LINC00612Q8N6U2 182 aa8.12□□□□□ -1.11
SNX1-204ENST00000559061 LYPD6BQ8NI32 183 aa8.12□□□□□ -1.11
SNX1-204ENST00000559061 TMEM263Q8WUH6 116 aaKnown RBP8.12□□□□□ -1.11
SNX1-204ENST00000559061 PYGO2Q9BRQ0 406 aa8.12□□□□□ -1.11
SNX1-204ENST00000559061 KLF12Q9Y4X4 402 aa8.12□□□□□ -1.11
SNX1-204ENST00000559061 TMEM189A5PLL7 270 aa8.11□□□□□ -1.11
SNX1-204ENST00000559061 HTN1P15515 57 aa8.11□□□□□ -1.11
SNX1-204ENST00000559061 CST9LP1Q5W188 147 aa8.11□□□□□ -1.11
SNX1-204ENST00000559061 CEMP1Q6PRD7 247 aaPredicted RBP8.11□□□□□ -1.11
SNX1-204ENST00000559061 PRNTQ86SH4 94 aa8.11□□□□□ -1.11
SNX1-204ENST00000559061 ZNF575Q86XF7 245 aa8.11□□□□□ -1.11
SNX1-204ENST00000559061 PHLDA1Q8WV24 401 aaPredicted RBP8.11□□□□□ -1.11
SNX1-204ENST00000559061 C16orf74Q96GX8 76 aa8.11□□□□□ -1.11
SNX1-204ENST00000559061 TREM1Q9NP99 234 aa8.11□□□□□ -1.11
SNX1-204ENST00000559061 GNG13Q9P2W3 67 aa8.11□□□□□ -1.11
SNX1-204ENST00000559061 TRBV6-1A0A0K0K1D8 114 aa8.1□□□□□ -1.11
SNX1-204ENST00000559061 CXorf65A6NEN9 183 aa8.1□□□□□ -1.11
SNX1-204ENST00000559061 IFNA7P01567 189 aa8.1□□□□□ -1.11
SNX1-204ENST00000559061 CRIP1P50238 77 aa8.1□□□□□ -1.11
SNX1-204ENST00000559061 ANXA2RQ3ZCQ2 193 aa8.1□□□□□ -1.11
SNX1-204ENST00000559061 MUC21Q5SSG8 566 aa8.1□□□□□ -1.11
SNX1-204ENST00000559061 COX8CQ7Z4L0 72 aa8.1□□□□□ -1.11
SNX1-204ENST00000559061 HIST1H2BAQ96A08 127 aa8.1□□□□□ -1.11
SNX1-204ENST00000559061 C11orf52Q96A22 123 aa8.1□□□□□ -1.11
SNX1-204ENST00000559061 NIPSNAP3BQ9BS92 247 aa8.1□□□□□ -1.11
SNX1-204ENST00000559061 DERL1Q9BUN8 251 aa8.1□□□□□ -1.11
SNX1-204ENST00000559061 NKX6-2Q9C056 277 aaPredicted RBP8.1□□□□□ -1.11
SNX1-204ENST00000559061 IGHV1OR15-1A0A075B7D0 117 aa8.09□□□□□ -1.11
SNX1-204ENST00000559061 C11orf94C9JXX5 98 aa8.09□□□□□ -1.11
SNX1-204ENST00000559061 LTAP01374 205 aa8.09□□□□□ -1.11
SNX1-204ENST00000559061 SPART-AS1P0CW21 52 aa8.09□□□□□ -1.11
SNX1-204ENST00000559061 TMEM183BQ1AE95 376 aa8.09□□□□□ -1.11
SNX1-204ENST00000559061 TDRG1Q3Y452 100 aa8.09□□□□□ -1.11
SNX1-204ENST00000559061 ZNF493Q6ZR52 646 aa8.09□□□□□ -1.11
SNX1-204ENST00000559061 EIF4E3Q8N5X7 224 aaKnown RBP8.09□□□□□ -1.11
SNX1-204ENST00000559061 ZC2HC1AQ96GY0 325 aa8.09□□□□□ -1.11
SNX1-204ENST00000559061 TCEAL7Q9BRU2 100 aa8.09□□□□□ -1.11
SNX1-204ENST00000559061 NOP10Q9NPE3 64 aaKnown RBP8.09□□□□□ -1.11
SNX1-204ENST00000559061 GSN-AS1Q9NRJ2 163 aa8.09□□□□□ -1.11
SNX1-204ENST00000559061 MDFICQ9P1T7 246 aa8.09□□□□□ -1.11
SNX1-204ENST00000559061 GCGP01275 180 aa8.08□□□□□ -1.12
SNX1-204ENST00000559061 TYMSP04818 313 aa8.08□□□□□ -1.12
SNX1-204ENST00000559061 BCL2P10415 239 aa8.08□□□□□ -1.12
SNX1-204ENST00000559061 TCL1AP56279 114 aa8.08□□□□□ -1.12
SNX1-204ENST00000559061 ZNF680Q8NEM1 530 aa8.08□□□□□ -1.12
SNX1-204ENST00000559061 PCNPQ8WW12 178 aaKnown RBP8.08□□□□□ -1.12
SNX1-204ENST00000559061 MANBALQ9NQG1 85 aa8.08□□□□□ -1.12
SNX1-204ENST00000559061 MUC4Q99102 2169 aa8.08□□□□□ -1.12
SNX1-204ENST00000559061 DNAH6Q9C0G6 4158 aa8.08□□□□□ -1.12
SNX1-204ENST00000559061 NACAE9PAV3 2078 aa8.07□□□□□ -1.12
SNX1-204ENST00000559061 TRBV20OR9-2A0A075B6H5 130 aa8.07□□□□□ -1.12
SNX1-204ENST00000559061 IGKV3D-20A0A0C4DH25 116 aa8.07□□□□□ -1.12
SNX1-204ENST00000559061 IGHV3-16A0A0C4DH30 117 aa8.07□□□□□ -1.12
SNX1-204ENST00000559061 NUPR2A6NF83 97 aa8.07□□□□□ -1.12
SNX1-204ENST00000559061 CBY3A6NI87 242 aa8.07□□□□□ -1.12
SNX1-204ENST00000559061 LYRM9A8MSI8 78 aa8.07□□□□□ -1.12
SNX1-204ENST00000559061 LCE2BO14633 110 aa8.07□□□□□ -1.12
SNX1-204ENST00000559061 GNRH2O43555 120 aa8.07□□□□□ -1.12
SNX1-204ENST00000559061 IGLV2-8P01709 118 aa8.07□□□□□ -1.12
SNX1-204ENST00000559061 AKR1C3P42330 323 aa8.07□□□□□ -1.12
SNX1-204ENST00000559061 PPT1P50897 306 aa8.07□□□□□ -1.12
SNX1-204ENST00000559061 DAZ2Q13117 558 aaKnown RBP8.07□□□□□ -1.12
SNX1-204ENST00000559061 TEX261Q6UWH6 196 aa8.07□□□□□ -1.12
SNX1-204ENST00000559061 Q6ZTI0 123 aa8.07□□□□□ -1.12
SNX1-204ENST00000559061 NHLRC2Q8NBF2 726 aa8.07□□□□□ -1.12
SNX1-204ENST00000559061 FMC1Q96HJ9 113 aa8.07□□□□□ -1.12
SNX1-204ENST00000559061 MLST8Q9BVC4 326 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms