RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 OR7C2O60412 319 aa4.26□□□□□ -1.73
CTDSPL2-204ENST00000558966 IGKV2D-40P01614 121 aaPredicted RBP4.26□□□□□ -1.73
CTDSPL2-204ENST00000558966 TAS2R60P59551 318 aa4.26□□□□□ -1.73
CTDSPL2-204ENST00000558966 ERCC8Q13216 396 aa4.26□□□□□ -1.73
CTDSPL2-204ENST00000558966 FAM122CQ6P4D5 195 aa4.26□□□□□ -1.73
CTDSPL2-204ENST00000558966 LINC01587Q99440 93 aa4.26□□□□□ -1.73
CTDSPL2-204ENST00000558966 PRELID1Q9Y255 219 aa4.26□□□□□ -1.73
CTDSPL2-204ENST00000558966 RNF222A6NCQ9 220 aa4.26□□□□□ -1.73
CTDSPL2-204ENST00000558966 LYRM9A8MSI8 78 aa4.26□□□□□ -1.73
CTDSPL2-204ENST00000558966 H7BYZ3 331 aa4.26□□□□□ -1.73
CTDSPL2-204ENST00000558966 HTN1P15515 57 aa4.26□□□□□ -1.73
CTDSPL2-204ENST00000558966 M6PRP20645 277 aa4.26□□□□□ -1.73
CTDSPL2-204ENST00000558966 LEPP41159 167 aa4.26□□□□□ -1.73
CTDSPL2-204ENST00000558966 RAB2AP61019 212 aa4.26□□□□□ -1.73
CTDSPL2-204ENST00000558966 DAD1P61803 113 aa4.26□□□□□ -1.73
CTDSPL2-204ENST00000558966 UBE2L3P68036 154 aaKnown RBP4.26□□□□□ -1.73
CTDSPL2-204ENST00000558966 RNASE8Q8TDE3 154 aaKnown RBP4.26□□□□□ -1.73
CTDSPL2-204ENST00000558966 ASB13Q8WXK3 278 aa4.26□□□□□ -1.73
CTDSPL2-204ENST00000558966 FAM19A4Q96LR4 140 aa4.26□□□□□ -1.73
CTDSPL2-204ENST00000558966 C20orf144Q9BQM9 153 aa4.26□□□□□ -1.73
CTDSPL2-204ENST00000558966 AGPAT4-IT1Q9H0P7 198 aa4.26□□□□□ -1.73
CTDSPL2-204ENST00000558966 AAMDCQ9H7C9 122 aa4.26□□□□□ -1.73
CTDSPL2-204ENST00000558966 DNAH17Q9UFH2 4485 aa4.25□□□□□ -1.73
CTDSPL2-204ENST00000558966 FAT2Q9NYQ8 4349 aa4.25□□□□□ -1.73
CTDSPL2-204ENST00000558966 KLLNB2CW77 178 aa4.25□□□□□ -1.73
CTDSPL2-204ENST00000558966 HTN3P15516 51 aa4.25□□□□□ -1.73
CTDSPL2-204ENST00000558966 ATP6V0CP27449 155 aa4.25□□□□□ -1.73
CTDSPL2-204ENST00000558966 TAS2R45P59539 299 aa4.25□□□□□ -1.73
CTDSPL2-204ENST00000558966 FHL2Q14192 279 aa4.25□□□□□ -1.73
CTDSPL2-204ENST00000558966 ZNF266Q14584 549 aa4.25□□□□□ -1.73
CTDSPL2-204ENST00000558966 ACOT6Q3I5F7 207 aaPredicted RBP4.25□□□□□ -1.73
CTDSPL2-204ENST00000558966 KHDC3LQ587J8 217 aa4.25□□□□□ -1.73
CTDSPL2-204ENST00000558966 PRR9Q5T870 116 aa4.25□□□□□ -1.73
CTDSPL2-204ENST00000558966 C9orf47Q6ZRZ4 202 aa4.25□□□□□ -1.73
CTDSPL2-204ENST00000558966 HSD17B11Q8NBQ5 300 aa4.25□□□□□ -1.73
CTDSPL2-204ENST00000558966 OR2T35Q8NGX2 323 aa4.25□□□□□ -1.73
CTDSPL2-204ENST00000558966 OR2G3Q8NGZ4 309 aa4.25□□□□□ -1.73
CTDSPL2-204ENST00000558966 TMEM263Q8WUH6 116 aaKnown RBP4.25□□□□□ -1.73
CTDSPL2-204ENST00000558966 C16orf74Q96GX8 76 aa4.25□□□□□ -1.73
CTDSPL2-204ENST00000558966 VGLL1Q99990 258 aa4.25□□□□□ -1.73
CTDSPL2-204ENST00000558966 Q9H3A6 140 aa4.25□□□□□ -1.73
CTDSPL2-204ENST00000558966 TNFSF18Q9UNG2 199 aa4.25□□□□□ -1.73
CTDSPL2-204ENST00000558966 FXYD6-FXYD2A0A087WZ82 144 aa4.24□□□□□ -1.73
CTDSPL2-204ENST00000558966 TRAV12-3A0A0B4J271 114 aa4.24□□□□□ -1.73
CTDSPL2-204ENST00000558966 C7orf71A4D174 169 aa4.24□□□□□ -1.73
CTDSPL2-204ENST00000558966 HMGB3O15347 200 aaKnown RBP4.24□□□□□ -1.73
CTDSPL2-204ENST00000558966 SLC25A5P05141 298 aaKnown RBP4.24□□□□□ -1.73
CTDSPL2-204ENST00000558966 DEFB130BP0DP73 79 aa4.24□□□□□ -1.73
CTDSPL2-204ENST00000558966 DEFB130AP0DP74 79 aa4.24□□□□□ -1.73
CTDSPL2-204ENST00000558966 CRISP2P16562 243 aa4.24□□□□□ -1.73
CTDSPL2-204ENST00000558966 RANP62826 216 aaKnown RBP4.24□□□□□ -1.73
CTDSPL2-204ENST00000558966 CD300CQ08708 224 aa4.24□□□□□ -1.73
CTDSPL2-204ENST00000558966 BTN1A1Q13410 526 aa4.24□□□□□ -1.73
CTDSPL2-204ENST00000558966 ZNF493Q6ZR52 646 aa4.24□□□□□ -1.73
CTDSPL2-204ENST00000558966 LYPD1Q8N2G4 141 aa4.24□□□□□ -1.73
CTDSPL2-204ENST00000558966 ZFAND2AQ8N6M9 145 aa4.24□□□□□ -1.73
CTDSPL2-204ENST00000558966 OR10G4Q8NGN3 311 aa4.24□□□□□ -1.73
CTDSPL2-204ENST00000558966 OR10G9Q8NGN4 311 aa4.24□□□□□ -1.73
CTDSPL2-204ENST00000558966 OR10G7Q8NGN6 311 aa4.24□□□□□ -1.73
CTDSPL2-204ENST00000558966 Q8TAT8 98 aa4.24□□□□□ -1.73
CTDSPL2-204ENST00000558966 LINC00477Q96M19 166 aa4.24□□□□□ -1.73
CTDSPL2-204ENST00000558966 PSMG3Q9BT73 122 aaPredicted RBP4.24□□□□□ -1.73
CTDSPL2-204ENST00000558966 NDUFAF3Q9BU61 184 aa4.24□□□□□ -1.73
CTDSPL2-204ENST00000558966 SH3BGRL3Q9H299 93 aa4.24□□□□□ -1.73
CTDSPL2-204ENST00000558966 HECTD4Q9Y4D8 3996 aa4.24□□□□□ -1.73
CTDSPL2-204ENST00000558966 A0A1W2PPV4 95 aa4.24□□□□□ -1.73
CTDSPL2-204ENST00000558966 ZNF324O75467 553 aaPredicted RBP4.24□□□□□ -1.73
CTDSPL2-204ENST00000558966 LCE1DQ5T752 114 aa4.24□□□□□ -1.73
CTDSPL2-204ENST00000558966 TMEM78Q5T7P6 136 aa4.24□□□□□ -1.73
CTDSPL2-204ENST00000558966 SERTAD4-AS1Q5TG53 156 aa4.24□□□□□ -1.73
CTDSPL2-204ENST00000558966 RPL7L1Q6DKI1 246 aaKnown RBP4.24□□□□□ -1.73
CTDSPL2-204ENST00000558966 PQLC2Q6ZP29 291 aa4.24□□□□□ -1.73
CTDSPL2-204ENST00000558966 Q6ZQT7 251 aa4.24□□□□□ -1.73
CTDSPL2-204ENST00000558966 FAM210BQ96KR6 192 aa4.24□□□□□ -1.73
CTDSPL2-204ENST00000558966 PYGO2Q9BRQ0 406 aa4.24□□□□□ -1.73
CTDSPL2-204ENST00000558966 NOP10Q9NPE3 64 aaKnown RBP4.24□□□□□ -1.73
CTDSPL2-204ENST00000558966 ZNF492Q9P255 531 aa4.24□□□□□ -1.73
CTDSPL2-204ENST00000558966 TIMM8BQ9Y5J9 83 aaPredicted RBP4.24□□□□□ -1.73
CTDSPL2-204ENST00000558966 NACAE9PAV3 2078 aa4.23□□□□□ -1.73
CTDSPL2-204ENST00000558966 RBAKDNA6NC62 111 aa4.23□□□□□ -1.73
CTDSPL2-204ENST00000558966 SMLR1H3BR10 107 aa4.23□□□□□ -1.73
CTDSPL2-204ENST00000558966 RHODO00212 210 aa4.23□□□□□ -1.73
CTDSPL2-204ENST00000558966 NMBP08949 121 aa4.23□□□□□ -1.73
CTDSPL2-204ENST00000558966 STAG3L2P0CL84 134 aa4.23□□□□□ -1.73
CTDSPL2-204ENST00000558966 STAG3L3P0CL85 134 aa4.23□□□□□ -1.73
CTDSPL2-204ENST00000558966 ARL14EPLP0DKL9 152 aa4.23□□□□□ -1.73
CTDSPL2-204ENST00000558966 RNASE4P34096 147 aaKnown RBP4.23□□□□□ -1.73
CTDSPL2-204ENST00000558966 CDC34P49427 236 aaPredicted RBP4.23□□□□□ -1.73
CTDSPL2-204ENST00000558966 ZNF138P52744 262 aa4.23□□□□□ -1.73
CTDSPL2-204ENST00000558966 SSX7Q7RTT5 188 aa4.23□□□□□ -1.73
CTDSPL2-204ENST00000558966 LINC00612Q8N6U2 182 aa4.23□□□□□ -1.73
CTDSPL2-204ENST00000558966 C11orf72Q8NBR9 251 aa4.23□□□□□ -1.73
CTDSPL2-204ENST00000558966 INO80EQ8NBZ0 244 aaPredicted RBP4.23□□□□□ -1.73
CTDSPL2-204ENST00000558966 LINC00467Q9BRT7 94 aa4.23□□□□□ -1.73
CTDSPL2-204ENST00000558966 OTORQ9NRC9 128 aa4.23□□□□□ -1.73
CTDSPL2-204ENST00000558966 MUC4Q99102 2169 aa4.23□□□□□ -1.73
CTDSPL2-204ENST00000558966 PGPA6NDG6 321 aa4.22□□□□□ -1.73
CTDSPL2-204ENST00000558966 CBY3A6NI87 242 aa4.22□□□□□ -1.73
CTDSPL2-204ENST00000558966 ATP5G1P05496 136 aa4.22□□□□□ -1.73
CTDSPL2-204ENST00000558966 GPX1P07203 203 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms