RNA–Protein interactions for RNA: ENST00000558440.5

ZEB1-211, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 886 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-211ENST00000558440 TRGV4A0A0C4DH28 118 aa4.02□□□□□ -1.77
ZEB1-211ENST00000558440 LINC00854A0A1B0GVQ3 168 aa4.02□□□□□ -1.77
ZEB1-211ENST00000558440 C7orf71A4D174 169 aa4.02□□□□□ -1.77
ZEB1-211ENST00000558440 H3BTX0 84 aa4.02□□□□□ -1.77
ZEB1-211ENST00000558440 SLC17A3O00476 420 aa4.02□□□□□ -1.77
ZEB1-211ENST00000558440 MRPS12O15235 138 aaKnown RBP4.02□□□□□ -1.77
ZEB1-211ENST00000558440 SPINK4O60575 86 aa4.02□□□□□ -1.77
ZEB1-211ENST00000558440 PRAF2O60831 178 aa4.02□□□□□ -1.77
ZEB1-211ENST00000558440 C1QBP02746 253 aa4.02□□□□□ -1.77
ZEB1-211ENST00000558440 SLC25A5P05141 298 aaKnown RBP4.02□□□□□ -1.77
ZEB1-211ENST00000558440 CRYBA4P53673 196 aa4.02□□□□□ -1.77
ZEB1-211ENST00000558440 TCL1AP56279 114 aa4.02□□□□□ -1.77
ZEB1-211ENST00000558440 LRP2P98164 4655 aa4.02□□□□□ -1.77
ZEB1-211ENST00000558440 IL18Q14116 193 aa4.02□□□□□ -1.77
ZEB1-211ENST00000558440 PATE2Q6UY27 113 aa4.02□□□□□ -1.77
ZEB1-211ENST00000558440 LINC00305Q7Z4B0 112 aa4.02□□□□□ -1.77
ZEB1-211ENST00000558440 Q8N814 137 aa4.02□□□□□ -1.77
ZEB1-211ENST00000558440 C11orf72Q8NBR9 251 aa4.02□□□□□ -1.77
ZEB1-211ENST00000558440 VGLL1Q99990 258 aa4.02□□□□□ -1.77
ZEB1-211ENST00000558440 MRPL16Q9NX20 251 aaKnown RBP4.02□□□□□ -1.77
ZEB1-211ENST00000558440 RABL2AQ9UBK7 228 aaPredicted RBP4.02□□□□□ -1.77
ZEB1-211ENST00000558440 RABL2BQ9UNT1 228 aa4.02□□□□□ -1.77
ZEB1-211ENST00000558440 KLF12Q9Y4X4 402 aa4.02□□□□□ -1.77
ZEB1-211ENST00000558440 TRAV5A0A0B4J249 113 aa4.01□□□□□ -1.77
ZEB1-211ENST00000558440 hDV102S1A0JD36 115 aa4.01□□□□□ -1.77
ZEB1-211ENST00000558440 ANKRD20A5PA0PJZ0 165 aa4.01□□□□□ -1.77
ZEB1-211ENST00000558440 LRCOL1A6NCL2 159 aa4.01□□□□□ -1.77
ZEB1-211ENST00000558440 E5RGE8 158 aa4.01□□□□□ -1.77
ZEB1-211ENST00000558440 K7EQD1 137 aa4.01□□□□□ -1.77
ZEB1-211ENST00000558440 GOSR2O14653 212 aa4.01□□□□□ -1.77
ZEB1-211ENST00000558440 CTDSPLO15194 276 aa4.01□□□□□ -1.77
ZEB1-211ENST00000558440 COX7A2P2O60397 106 aa4.01□□□□□ -1.77
ZEB1-211ENST00000558440 MPDU1O75352 247 aa4.01□□□□□ -1.77
ZEB1-211ENST00000558440 HOXB5P09067 269 aa4.01□□□□□ -1.77
ZEB1-211ENST00000558440 RRAS2P62070 204 aaPredicted RBP4.01□□□□□ -1.77
ZEB1-211ENST00000558440 SLC38A11Q08AI6 406 aa4.01□□□□□ -1.77
ZEB1-211ENST00000558440 ZNF415Q09FC8 603 aa4.01□□□□□ -1.77
ZEB1-211ENST00000558440 TMEM128Q5BJH2 165 aa4.01□□□□□ -1.77
ZEB1-211ENST00000558440 IBA57Q5T440 356 aaKnown RBP4.01□□□□□ -1.77
ZEB1-211ENST00000558440 ZNF546Q86UE3 836 aa4.01□□□□□ -1.77
ZEB1-211ENST00000558440 LRTM2Q8N967 370 aa4.01□□□□□ -1.77
ZEB1-211ENST00000558440 DIRAS2Q96HU8 199 aa4.01□□□□□ -1.77
ZEB1-211ENST00000558440 ARPC5LQ9BPX5 153 aa4.01□□□□□ -1.77
ZEB1-211ENST00000558440 TXNDC17Q9BRA2 123 aa4.01□□□□□ -1.77
ZEB1-211ENST00000558440 MRPL32Q9BYC8 188 aaKnown RBP4.01□□□□□ -1.77
ZEB1-211ENST00000558440 MIXL1Q9H2W2 232 aa4.01□□□□□ -1.77
ZEB1-211ENST00000558440 NPVFQ9HCQ7 196 aa4.01□□□□□ -1.77
ZEB1-211ENST00000558440 PSENENQ9NZ42 101 aa4.01□□□□□ -1.77
ZEB1-211ENST00000558440 RCL1Q9Y2P8 373 aaKnown RBP4.01□□□□□ -1.77
ZEB1-211ENST00000558440 KLLNB2CW77 178 aa4□□□□□ -1.77
ZEB1-211ENST00000558440 K7EPK0 472 aa4□□□□□ -1.77
ZEB1-211ENST00000558440 CTDSP2O14595 271 aa4□□□□□ -1.77
ZEB1-211ENST00000558440 SSSCA1O60232 199 aa4□□□□□ -1.77
ZEB1-211ENST00000558440 OXTP01178 125 aa4□□□□□ -1.77
ZEB1-211ENST00000558440 ORM1P02763 201 aa4□□□□□ -1.77
ZEB1-211ENST00000558440 GPX1P07203 203 aa4□□□□□ -1.77
ZEB1-211ENST00000558440 OR4E1P0C645 316 aa4□□□□□ -1.77
ZEB1-211ENST00000558440 IGLC2P0DOY2 106 aa4□□□□□ -1.77
ZEB1-211ENST00000558440 RNASE4P34096 147 aaKnown RBP4□□□□□ -1.77
ZEB1-211ENST00000558440 FAUP35544 74 aaKnown RBP4□□□□□ -1.77
ZEB1-211ENST00000558440 CD300CQ08708 224 aa4□□□□□ -1.77
ZEB1-211ENST00000558440 BTN1A1Q13410 526 aa4□□□□□ -1.77
ZEB1-211ENST00000558440 GUK1Q16774 197 aa4□□□□□ -1.77
ZEB1-211ENST00000558440 C10orf113Q5VZT2 155 aa4□□□□□ -1.77
ZEB1-211ENST00000558440 Q9HAA7 133 aa4□□□□□ -1.77
ZEB1-211ENST00000558440 CCDC59Q9P031 241 aaKnown RBP4□□□□□ -1.77
ZEB1-211ENST00000558440 IGHV1OR15-1A0A075B7D0 117 aa3.99□□□□□ -1.77
ZEB1-211ENST00000558440 IGHV3-38A0A0C4DH36 116 aa3.99□□□□□ -1.77
ZEB1-211ENST00000558440 C9JCJ5 164 aa3.99□□□□□ -1.77
ZEB1-211ENST00000558440 FNDC10F2Z333 226 aa3.99□□□□□ -1.77
ZEB1-211ENST00000558440 H3BQ15 152 aa3.99□□□□□ -1.77
ZEB1-211ENST00000558440 AGPAT2O15120 278 aa3.99□□□□□ -1.77
ZEB1-211ENST00000558440 CCNKO75909 580 aa3.99□□□□□ -1.77
ZEB1-211ENST00000558440 SFT2D2O95562 160 aa3.99□□□□□ -1.77
ZEB1-211ENST00000558440 SFTA3P0C7M3 94 aa3.99□□□□□ -1.77
ZEB1-211ENST00000558440 METTL15P1P0C7V9 234 aa3.99□□□□□ -1.77
ZEB1-211ENST00000558440 PPT1P50897 306 aa3.99□□□□□ -1.77
ZEB1-211ENST00000558440 POLR2GP62487 172 aaKnown RBP eCLIP3.99□□□□□ -1.77
ZEB1-211ENST00000558440 ERCC8Q13216 396 aa3.99□□□□□ -1.77
ZEB1-211ENST00000558440 OPCMLQ14982 345 aa3.99□□□□□ -1.77
ZEB1-211ENST00000558440 CTF1Q16619 201 aa3.99□□□□□ -1.77
ZEB1-211ENST00000558440 SH2D6Q7Z4S9 175 aa3.99□□□□□ -1.77
ZEB1-211ENST00000558440 OR10P1Q8NGE3 313 aa3.99□□□□□ -1.77
ZEB1-211ENST00000558440 MRPL53Q96EL3 112 aaKnown RBP3.99□□□□□ -1.77
ZEB1-211ENST00000558440 SAT2Q96F10 170 aaPredicted RBP3.99□□□□□ -1.77
ZEB1-211ENST00000558440 LINC00477Q96M19 166 aa3.99□□□□□ -1.77
ZEB1-211ENST00000558440 NAA50Q9GZZ1 169 aaKnown RBP3.99□□□□□ -1.77
ZEB1-211ENST00000558440 RSL24D1Q9UHA3 163 aaKnown RBP3.99□□□□□ -1.77
ZEB1-211ENST00000558440 TP53TG3Q9ULZ0 132 aa3.99□□□□□ -1.77
ZEB1-211ENST00000558440 TNXBP22105 4242 aa3.98□□□□□ -1.77
ZEB1-211ENST00000558440 TRAV8-6A0A0B4J262 113 aa3.98□□□□□ -1.77
ZEB1-211ENST00000558440 IBA57-AS1B1ANH7 110 aa3.98□□□□□ -1.77
ZEB1-211ENST00000558440 M0R3E3 92 aa3.98□□□□□ -1.77
ZEB1-211ENST00000558440 ZNF253O75346 499 aa3.98□□□□□ -1.77
ZEB1-211ENST00000558440 NMBP08949 121 aa3.98□□□□□ -1.77
ZEB1-211ENST00000558440 HIST1H1EP10412 219 aaKnown RBP3.98□□□□□ -1.77
ZEB1-211ENST00000558440 CRISP2P16562 243 aa3.98□□□□□ -1.77
ZEB1-211ENST00000558440 PPP1R1AQ13522 171 aa3.98□□□□□ -1.77
ZEB1-211ENST00000558440 RAB31Q13636 194 aa3.98□□□□□ -1.77
ZEB1-211ENST00000558440 LINC01556Q5JQF7 62 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms