RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 SRSF9Q13242 221 aaKnown RBP eCLIP8.69□□□□□ -1.02
PCAT29-201ENST00000558411 PRADC1Q9BSG0 188 aa8.69□□□□□ -1.02
PCAT29-201ENST00000558411 PLXNB1O43157 2135 aa8.69□□□□□ -1.02
PCAT29-201ENST00000558411 CENPVL3A0A0U1RRI6 287 aa8.68□□□□□ -1.02
PCAT29-201ENST00000558411 FCN3O75636 299 aa8.68□□□□□ -1.02
PCAT29-201ENST00000558411 SNCGO76070 127 aa8.68□□□□□ -1.02
PCAT29-201ENST00000558411 COX6B1P14854 86 aa8.68□□□□□ -1.02
PCAT29-201ENST00000558411 EFNA4P52798 201 aa8.68□□□□□ -1.02
PCAT29-201ENST00000558411 RPL32P62910 135 aaKnown RBP8.68□□□□□ -1.02
PCAT29-201ENST00000558411 HERV-K104P63124 156 aa8.68□□□□□ -1.02
PCAT29-201ENST00000558411 ORMDL2Q53FV1 153 aa8.68□□□□□ -1.02
PCAT29-201ENST00000558411 Q8TAT8 98 aa8.68□□□□□ -1.02
PCAT29-201ENST00000558411 TOMM6Q96B49 74 aa8.68□□□□□ -1.02
PCAT29-201ENST00000558411 AJUBAQ96IF1 538 aa8.68□□□□□ -1.02
PCAT29-201ENST00000558411 RNF5Q99942 180 aa8.68□□□□□ -1.02
PCAT29-201ENST00000558411 NDUFB3O43676 98 aa8.68□□□□□ -1.02
PCAT29-201ENST00000558411 SCGB1C2P0DMR2 95 aa8.68□□□□□ -1.02
PCAT29-201ENST00000558411 IFITM1P13164 125 aa8.68□□□□□ -1.02
PCAT29-201ENST00000558411 SCGB1D4Q6XE38 83 aa8.68□□□□□ -1.02
PCAT29-201ENST00000558411 IGHV4-4A0A075B6R2 117 aa8.67□□□□□ -1.02
PCAT29-201ENST00000558411 PATE3B3GLJ2 98 aa8.67□□□□□ -1.02
PCAT29-201ENST00000558411 IGHV1-8P0DP01 117 aa8.67□□□□□ -1.02
PCAT29-201ENST00000558411 CD59P13987 128 aa8.67□□□□□ -1.02
PCAT29-201ENST00000558411 TMEM155Q4W5P6 130 aa8.67□□□□□ -1.02
PCAT29-201ENST00000558411 TTC32Q5I0X7 151 aa8.67□□□□□ -1.02
PCAT29-201ENST00000558411 ASCL5Q7RTU5 278 aa8.67□□□□□ -1.02
PCAT29-201ENST00000558411 LINC01600Q96MT4 127 aa8.67□□□□□ -1.02
PCAT29-201ENST00000558411 SCGB3A1Q96QR1 104 aa8.67□□□□□ -1.02
PCAT29-201ENST00000558411 LINC01548A6NM66 108 aa8.66□□□□□ -1.02
PCAT29-201ENST00000558411 ERCC8Q13216 396 aa8.66□□□□□ -1.02
PCAT29-201ENST00000558411 C10orf126Q8N4M7 172 aa8.66□□□□□ -1.02
PCAT29-201ENST00000558411 KIR2DL4Q99706 377 aa8.66□□□□□ -1.02
PCAT29-201ENST00000558411 SMIM2Q9BVW6 85 aa8.66□□□□□ -1.02
PCAT29-201ENST00000558411 CUL9Q8IWT3 2517 aa8.66□□□□□ -1.02
PCAT29-201ENST00000558411 RBAKDNA6NC62 111 aa8.66□□□□□ -1.02
PCAT29-201ENST00000558411 TRGV3P03979 118 aa8.66□□□□□ -1.02
PCAT29-201ENST00000558411 SVILO95425 2214 aa8.66□□□□□ -1.02
PCAT29-201ENST00000558411 INTS1Q8N201 2190 aaKnown RBP8.65□□□□□ -1.02
PCAT29-201ENST00000558411 IGHV1-3A0A0C4DH29 117 aa8.65□□□□□ -1.02
PCAT29-201ENST00000558411 H3BVH4 76 aa8.65□□□□□ -1.02
PCAT29-201ENST00000558411 SLC25A20O43772 301 aa8.65□□□□□ -1.02
PCAT29-201ENST00000558411 LOXP28300 417 aaPredicted RBP8.65□□□□□ -1.02
PCAT29-201ENST00000558411 PRR30Q53SZ7 412 aaPredicted RBP8.65□□□□□ -1.02
PCAT29-201ENST00000558411 PLEKHB2Q96CS7 222 aa8.65□□□□□ -1.02
PCAT29-201ENST00000558411 SLC50A1Q9BRV3 221 aa8.65□□□□□ -1.02
PCAT29-201ENST00000558411 FRYQ5TBA9 3013 aa8.65□□□□□ -1.02
PCAT29-201ENST00000558411 CCDC179H3BU77 68 aa8.65□□□□□ -1.03
PCAT29-201ENST00000558411 HLA-DMBP28068 263 aa8.65□□□□□ -1.03
PCAT29-201ENST00000558411 VKORC1Q9BQB6 163 aa8.65□□□□□ -1.03
PCAT29-201ENST00000558411 TRAV8-2A0A0B4J237 113 aa8.64□□□□□ -1.03
PCAT29-201ENST00000558411 A0A0J9YY99 117 aa8.64□□□□□ -1.03
PCAT29-201ENST00000558411 MFAP4P55083 255 aa8.64□□□□□ -1.03
PCAT29-201ENST00000558411 PAPPA-AS1Q5QFB9 102 aa8.64□□□□□ -1.03
PCAT29-201ENST00000558411 SFTA2Q6UW10 78 aa8.64□□□□□ -1.03
PCAT29-201ENST00000558411 GFRALQ6UXV0 394 aa8.64□□□□□ -1.03
PCAT29-201ENST00000558411 SMIM20Q8N5G0 67 aa8.64□□□□□ -1.03
PCAT29-201ENST00000558411 BAALCQ8WXS3 180 aa8.64□□□□□ -1.03
PCAT29-201ENST00000558411 TNFRSF18Q9Y5U5 241 aa8.64□□□□□ -1.03
PCAT29-201ENST00000558411 TRAV4A0A0B4J268 109 aa8.63□□□□□ -1.03
PCAT29-201ENST00000558411 IGKV3D-20A0A0C4DH25 116 aa8.63□□□□□ -1.03
PCAT29-201ENST00000558411 MBD3L4A6NDZ8 208 aaPredicted RBP8.63□□□□□ -1.03
PCAT29-201ENST00000558411 MBD3L3A6NE82 208 aaPredicted RBP8.63□□□□□ -1.03
PCAT29-201ENST00000558411 MBD3L5A6NJ08 208 aaPredicted RBP8.63□□□□□ -1.03
PCAT29-201ENST00000558411 TMEM178BH3BS89 294 aa8.63□□□□□ -1.03
PCAT29-201ENST00000558411 IGLV1-47P01700 117 aa8.63□□□□□ -1.03
PCAT29-201ENST00000558411 CFC1BP0CG36 223 aa8.63□□□□□ -1.03
PCAT29-201ENST00000558411 CFC1P0CG37 223 aa8.63□□□□□ -1.03
PCAT29-201ENST00000558411 NUP37Q8NFH4 326 aa8.63□□□□□ -1.03
PCAT29-201ENST00000558411 MBD3L2Q8NHZ7 208 aaPredicted RBP8.63□□□□□ -1.03
PCAT29-201ENST00000558411 CFHR4Q92496 578 aa8.63□□□□□ -1.03
PCAT29-201ENST00000558411 RASL10AQ92737 203 aa8.63□□□□□ -1.03
PCAT29-201ENST00000558411 PRO1854Q9UHT4 67 aa8.63□□□□□ -1.03
PCAT29-201ENST00000558411 TRAV26-2A0A0B4J265 109 aa8.63□□□□□ -1.03
PCAT29-201ENST00000558411 IGHV7-4-1A0A0J9YVY3 117 aa8.63□□□□□ -1.03
PCAT29-201ENST00000558411 A0A1W2PNU3 283 aaPredicted RBP8.63□□□□□ -1.03
PCAT29-201ENST00000558411 CNIH1O95406 144 aa8.63□□□□□ -1.03
PCAT29-201ENST00000558411 IGHV3-30P01768 117 aa8.63□□□□□ -1.03
PCAT29-201ENST00000558411 IGHV3-30-5P0DP03 117 aa8.63□□□□□ -1.03
PCAT29-201ENST00000558411 HERVK_113P61574 105 aa8.63□□□□□ -1.03
PCAT29-201ENST00000558411 CCL8P80075 99 aa8.63□□□□□ -1.03
PCAT29-201ENST00000558411 KAAG1Q9UBP8 84 aa8.63□□□□□ -1.03
PCAT29-201ENST00000558411 CTSZQ9UBR2 303 aa8.63□□□□□ -1.03
PCAT29-201ENST00000558411 SMAD5-AS1Q9Y6J3 95 aa8.63□□□□□ -1.03
PCAT29-201ENST00000558411 C17orf100A8MU93 164 aa8.62□□□□□ -1.03
PCAT29-201ENST00000558411 BUB1B-PAK6H3BSN5 160 aa8.62□□□□□ -1.03
PCAT29-201ENST00000558411 P0DMU3 169 aa8.62□□□□□ -1.03
PCAT29-201ENST00000558411 FAM231AP0DMU4 169 aa8.62□□□□□ -1.03
PCAT29-201ENST00000558411 FAM231CP0DMU5 169 aa8.62□□□□□ -1.03
PCAT29-201ENST00000558411 RPL13AP40429 203 aaKnown RBP8.62□□□□□ -1.03
PCAT29-201ENST00000558411 MRPL23Q16540 153 aaKnown RBP8.62□□□□□ -1.03
PCAT29-201ENST00000558411 DYNAPQ8N1N2 210 aa8.62□□□□□ -1.03
PCAT29-201ENST00000558411 IGFBPL1Q8WX77 278 aa8.62□□□□□ -1.03
PCAT29-201ENST00000558411 SCGB2A1O75556 95 aa8.62□□□□□ -1.03
PCAT29-201ENST00000558411 LYPD2Q6UXB3 125 aa8.62□□□□□ -1.03
PCAT29-201ENST00000558411 SLC25A29Q8N8R3 303 aa8.62□□□□□ -1.03
PCAT29-201ENST00000558411 PRSS33Q8NF86 280 aa8.62□□□□□ -1.03
PCAT29-201ENST00000558411 OR10J6PQ8NGY7 276 aa8.62□□□□□ -1.03
PCAT29-201ENST00000558411 ONECUT1Q9UBC0 465 aa8.62□□□□□ -1.03
PCAT29-201ENST00000558411 DMXL1Q9Y485 3027 aa8.61□□□□□ -1.03
PCAT29-201ENST00000558411 GPR179Q6PRD1 2367 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms