RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 MTCL1Q9Y4B5 1905 aaKnown RBP9.37□□□□□ -0.91
CSPG4P12-201ENST00000558282 C22orf46C9J442 243 aa9.37□□□□□ -0.91
CSPG4P12-201ENST00000558282 TMEM178BH3BS89 294 aa9.37□□□□□ -0.91
CSPG4P12-201ENST00000558282 RS1O15537 224 aa9.37□□□□□ -0.91
CSPG4P12-201ENST00000558282 RNASE6Q93091 150 aaKnown RBP9.37□□□□□ -0.91
CSPG4P12-201ENST00000558282 E9PLD3 99 aa9.37□□□□□ -0.91
CSPG4P12-201ENST00000558282 ETV2O00321 342 aaPredicted RBP9.37□□□□□ -0.91
CSPG4P12-201ENST00000558282 ATP5J2P56134 94 aa9.37□□□□□ -0.91
CSPG4P12-201ENST00000558282 C2orf70A6NJV1 201 aa9.37□□□□□ -0.91
CSPG4P12-201ENST00000558282 HOXD3P31249 432 aaPredicted RBP9.37□□□□□ -0.91
CSPG4P12-201ENST00000558282 SSC4DQ8WTU2 575 aa9.37□□□□□ -0.91
CSPG4P12-201ENST00000558282 E9PLN8 166 aa9.36□□□□□ -0.91
CSPG4P12-201ENST00000558282 IGF2BP2-AS1Q96M15 143 aa9.36□□□□□ -0.91
CSPG4P12-201ENST00000558282 JMJD7-PLA2G4BH0Y9G9 81 aa9.36□□□□□ -0.91
CSPG4P12-201ENST00000558282 CRYGBP07316 175 aa9.36□□□□□ -0.91
CSPG4P12-201ENST00000558282 ZNF833PQ6ZTB9 187 aa9.36□□□□□ -0.91
CSPG4P12-201ENST00000558282 C3orf22Q8N5N4 141 aa9.36□□□□□ -0.91
CSPG4P12-201ENST00000558282 RHPN1-AS1Q9BWJ2 59 aa9.36□□□□□ -0.91
CSPG4P12-201ENST00000558282 LENEPQ9Y5L5 61 aa9.36□□□□□ -0.91
CSPG4P12-201ENST00000558282 PF4P02776 101 aa9.36□□□□□ -0.91
CSPG4P12-201ENST00000558282 MUSTN1Q8IVN3 82 aa9.36□□□□□ -0.91
CSPG4P12-201ENST00000558282 IGKV3D-7A0A0C4DH55 119 aa9.36□□□□□ -0.91
CSPG4P12-201ENST00000558282 WNK2Q9Y3S1 2297 aa9.35□□□□□ -0.91
CSPG4P12-201ENST00000558282 PFN2P35080 140 aa9.35□□□□□ -0.91
CSPG4P12-201ENST00000558282 NDPQ00604 133 aa9.35□□□□□ -0.91
CSPG4P12-201ENST00000558282 FDCSPQ8NFU4 85 aa9.35□□□□□ -0.91
CSPG4P12-201ENST00000558282 GTSF1Q8WW33 167 aa9.35□□□□□ -0.91
CSPG4P12-201ENST00000558282 RBAKDNA6NC62 111 aa9.35□□□□□ -0.91
CSPG4P12-201ENST00000558282 DAZ1Q9NQZ3 744 aaKnown RBP9.35□□□□□ -0.91
CSPG4P12-201ENST00000558282 IGLV3-1P01715 115 aa9.35□□□□□ -0.91
CSPG4P12-201ENST00000558282 VMO1Q7Z5L0 202 aa9.35□□□□□ -0.91
CSPG4P12-201ENST00000558282 C3orf56Q8N813 242 aa9.34□□□□□ -0.91
CSPG4P12-201ENST00000558282 NYNRINQ9P2P1 1898 aaKnown RBP9.34□□□□□ -0.91
CSPG4P12-201ENST00000558282 MRPL53Q96EL3 112 aaKnown RBP9.34□□□□□ -0.91
CSPG4P12-201ENST00000558282 CACNA1HO95180 2353 aa9.34□□□□□ -0.91
CSPG4P12-201ENST00000558282 IGHV1OR15-1A0A075B7D0 117 aa9.34□□□□□ -0.91
CSPG4P12-201ENST00000558282 CRIPAKQ8N1N5 446 aa9.34□□□□□ -0.91
CSPG4P12-201ENST00000558282 FAM110DQ8TAY7 271 aaPredicted RBP9.34□□□□□ -0.91
CSPG4P12-201ENST00000558282 LINC01560Q8TB33 94 aa9.34□□□□□ -0.91
CSPG4P12-201ENST00000558282 PTH2Q96A98 100 aa9.34□□□□□ -0.91
CSPG4P12-201ENST00000558282 C7orf69Q9H7B7 122 aa9.34□□□□□ -0.91
CSPG4P12-201ENST00000558282 LINC00311Q8N616 119 aa9.33□□□□□ -0.92
CSPG4P12-201ENST00000558282 CFHR4Q92496 578 aa9.33□□□□□ -0.92
CSPG4P12-201ENST00000558282 RIF1Q5UIP0 2472 aaKnown RBP9.33□□□□□ -0.92
CSPG4P12-201ENST00000558282 SPAARA0A1B0GVQ0 90 aa9.33□□□□□ -0.92
CSPG4P12-201ENST00000558282 ZFP2Q6ZN57 461 aa9.33□□□□□ -0.92
CSPG4P12-201ENST00000558282 ATRXP46100 2492 aa9.33□□□□□ -0.92
CSPG4P12-201ENST00000558282 FAM240AA0A1B0GVK7 77 aa9.33□□□□□ -0.92
CSPG4P12-201ENST00000558282 CTRLP40313 264 aa9.33□□□□□ -0.92
CSPG4P12-201ENST00000558282 WT1-ASQ06250 92 aa9.33□□□□□ -0.92
CSPG4P12-201ENST00000558282 OXLD1Q5BKU9 147 aa9.33□□□□□ -0.92
CSPG4P12-201ENST00000558282 DKK1O94907 266 aa9.33□□□□□ -0.92
CSPG4P12-201ENST00000558282 DEFB123Q8N688 67 aa9.33□□□□□ -0.92
CSPG4P12-201ENST00000558282 VSIG2Q96IQ7 327 aa9.33□□□□□ -0.92
CSPG4P12-201ENST00000558282 TM2D2Q9BX73 214 aa9.32□□□□□ -0.92
CSPG4P12-201ENST00000558282 ANK1P16157 1881 aa9.32□□□□□ -0.92
CSPG4P12-201ENST00000558282 SHANK1Q9Y566 2161 aa9.32□□□□□ -0.92
CSPG4P12-201ENST00000558282 HTN3P15516 51 aa9.32□□□□□ -0.92
CSPG4P12-201ENST00000558282 C3orf36Q3SXR2 165 aa9.32□□□□□ -0.92
CSPG4P12-201ENST00000558282 LGALS9O00182 355 aa9.32□□□□□ -0.92
CSPG4P12-201ENST00000558282 ODF1Q14990 250 aa9.32□□□□□ -0.92
CSPG4P12-201ENST00000558282 LRRC75A-AS1Q8N1F1 130 aa9.32□□□□□ -0.92
CSPG4P12-201ENST00000558282 IMUPQ9GZP8 106 aa9.32□□□□□ -0.92
CSPG4P12-201ENST00000558282 FAM236DA0A1B0GTK5 79 aa9.32□□□□□ -0.92
CSPG4P12-201ENST00000558282 ZNF883P0CG24 379 aa9.32□□□□□ -0.92
CSPG4P12-201ENST00000558282 FAM236CP0DP71 79 aa9.32□□□□□ -0.92
CSPG4P12-201ENST00000558282 Q8N1Y9 231 aa9.32□□□□□ -0.92
CSPG4P12-201ENST00000558282 TRAV25A0A0B4J276 109 aa9.31□□□□□ -0.92
CSPG4P12-201ENST00000558282 MP68P56378 58 aa9.31□□□□□ -0.92
CSPG4P12-201ENST00000558282 NDUFA11Q86Y39 141 aa9.31□□□□□ -0.92
CSPG4P12-201ENST00000558282 THBDP07204 575 aa9.31□□□□□ -0.92
CSPG4P12-201ENST00000558282 TMEM219Q86XT9 240 aa9.31□□□□□ -0.92
CSPG4P12-201ENST00000558282 Q9H8V8 135 aa9.31□□□□□ -0.92
CSPG4P12-201ENST00000558282 PINLYPA6NC86 204 aa9.31□□□□□ -0.92
CSPG4P12-201ENST00000558282 CD59P13987 128 aa9.31□□□□□ -0.92
CSPG4P12-201ENST00000558282 ATP1A1-AS1Q5TC04 95 aa9.31□□□□□ -0.92
CSPG4P12-201ENST00000558282 SPRR3Q9UBC9 169 aa9.31□□□□□ -0.92
CSPG4P12-201ENST00000558282 PRB3Q04118 309 aaPredicted RBP9.31□□□□□ -0.92
CSPG4P12-201ENST00000558282 SLC25A29Q8N8R3 303 aa9.31□□□□□ -0.92
CSPG4P12-201ENST00000558282 RNF166Q96A37 237 aaPredicted RBP9.31□□□□□ -0.92
CSPG4P12-201ENST00000558282 CHD3Q12873 2000 aaKnown RBP9.3□□□□□ -0.92
CSPG4P12-201ENST00000558282 NOTCH3Q9UM47 2321 aa9.3□□□□□ -0.92
CSPG4P12-201ENST00000558282 NDUFC2-KCTD14E9PQ53 114 aa9.3□□□□□ -0.92
CSPG4P12-201ENST00000558282 C15orf65H3BRN8 121 aa9.3□□□□□ -0.92
CSPG4P12-201ENST00000558282 CCL19Q99731 98 aa9.3□□□□□ -0.92
CSPG4P12-201ENST00000558282 NDUFA7O95182 113 aa9.3□□□□□ -0.92
CSPG4P12-201ENST00000558282 B3GALT5-AS1P59052 145 aa9.3□□□□□ -0.92
CSPG4P12-201ENST00000558282 DYNAPQ8N1N2 210 aa9.3□□□□□ -0.92
CSPG4P12-201ENST00000558282 YPEL4Q96NS1 127 aa9.3□□□□□ -0.92
CSPG4P12-201ENST00000558282 CLUHP3Q96NS8 147 aa9.3□□□□□ -0.92
CSPG4P12-201ENST00000558282 C11orf86A6NJI1 115 aa9.3□□□□□ -0.92
CSPG4P12-201ENST00000558282 WFDC9Q8NEX5 89 aa9.3□□□□□ -0.92
CSPG4P12-201ENST00000558282 TCL1BO95988 128 aa9.29□□□□□ -0.92
CSPG4P12-201ENST00000558282 TRBV6-1A0A0K0K1D8 114 aa9.29□□□□□ -0.92
CSPG4P12-201ENST00000558282 PDE6GP18545 87 aa9.29□□□□□ -0.92
CSPG4P12-201ENST00000558282 CXCL5P42830 114 aa9.29□□□□□ -0.92
CSPG4P12-201ENST00000558282 GATA4P43694 442 aa9.29□□□□□ -0.92
CSPG4P12-201ENST00000558282 COLQQ9Y215 455 aaPredicted RBP9.29□□□□□ -0.92
CSPG4P12-201ENST00000558282 SCN5AQ14524 2016 aa9.29□□□□□ -0.92
CSPG4P12-201ENST00000558282 SBF1O95248 1867 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms