RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 C12orf54Q6X4T0 127 aa13.58□□□□□ -0.24
XRCC3-218ENST00000557439 LCNL1Q6ZST4 164 aa13.58□□□□□ -0.24
XRCC3-218ENST00000557439 EEF1AKMT3Q96AZ1 226 aa13.58□□□□□ -0.24
XRCC3-218ENST00000557439 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.57□□□□□ -0.245e-6■■■□□ 17.9
XRCC3-218ENST00000557439 NMUP48645 174 aa13.57□□□□□ -0.24
XRCC3-218ENST00000557439 LY6EQ16553 131 aa13.57□□□□□ -0.24
XRCC3-218ENST00000557439 LINC01559Q495D7 138 aa13.57□□□□□ -0.24
XRCC3-218ENST00000557439 AMMECR1LQ6DCA0 310 aa13.57□□□□□ -0.24
XRCC3-218ENST00000557439 OR4C5Q8NGB2 326 aa13.57□□□□□ -0.24
XRCC3-218ENST00000557439 METTL26Q96S19 204 aa13.57□□□□□ -0.24
XRCC3-218ENST00000557439 NAA38Q9BRA0 125 aaKnown RBP13.57□□□□□ -0.24
XRCC3-218ENST00000557439 UNQ9165/PRO28630Q6UXU0 137 aa13.57□□□□□ -0.24
XRCC3-218ENST00000557439 ITLN2Q8WWU7 325 aaPredicted RBP13.57□□□□□ -0.24
XRCC3-218ENST00000557439 UTP20O75691 2785 aaKnown RBP13.56□□□□□ -0.24
XRCC3-218ENST00000557439 IGKV3-7A0A075B6H7 116 aa13.56□□□□□ -0.24
XRCC3-218ENST00000557439 IGHV4-39P01824 125 aa13.56□□□□□ -0.24
XRCC3-218ENST00000557439 GNLYP22749 145 aa13.56□□□□□ -0.24
XRCC3-218ENST00000557439 LGALS9BQ3B8N2 356 aa13.56□□□□□ -0.24
XRCC3-218ENST00000557439 LGALS9CQ6DKI2 356 aa13.56□□□□□ -0.24
XRCC3-218ENST00000557439 C20orf173Q96LM9 149 aa13.56□□□□□ -0.24
XRCC3-218ENST00000557439 MAP1LC3AQ9H492 121 aa13.56□□□□□ -0.24
XRCC3-218ENST00000557439 UFC1Q9Y3C8 167 aa13.56□□□□□ -0.24
XRCC3-218ENST00000557439 TRAV40A0A0B4J280 105 aa13.56□□□□□ -0.24
XRCC3-218ENST00000557439 SMAD7O15105 426 aaKnown RBP13.56□□□□□ -0.24
XRCC3-218ENST00000557439 TMEM78Q5T7P6 136 aa13.56□□□□□ -0.24
XRCC3-218ENST00000557439 TRAV8-6A0A0B4J262 113 aa13.55□□□□□ -0.24
XRCC3-218ENST00000557439 IGHV3-11P01762 117 aa13.55□□□□□ -0.24
XRCC3-218ENST00000557439 ATP5G2Q06055 141 aa13.55□□□□□ -0.24
XRCC3-218ENST00000557439 C21orf62-AS1Q17RA5 79 aa13.55□□□□□ -0.24
XRCC3-218ENST00000557439 PIFOQ8TCI5 191 aa13.55□□□□□ -0.24
XRCC3-218ENST00000557439 SLC50A1Q9BRV3 221 aa13.55□□□□□ -0.24
XRCC3-218ENST00000557439 CNFNQ9BYD5 112 aa13.55□□□□□ -0.24
XRCC3-218ENST00000557439 TRAV41A0A0B4J266 112 aa13.54□□□□□ -0.24
XRCC3-218ENST00000557439 FBLL1A6NHQ2 334 aaKnown RBP13.54□□□□□ -0.24
XRCC3-218ENST00000557439 TM4SF20Q53R12 229 aa13.54□□□□□ -0.24
XRCC3-218ENST00000557439 C16orf92Q96LL3 132 aa13.54□□□□□ -0.24
XRCC3-218ENST00000557439 IGHV7-4-1A0A0J9YVY3 117 aa13.54□□□□□ -0.24
XRCC3-218ENST00000557439 TMEM97Q5BJF2 176 aa13.54□□□□□ -0.24
XRCC3-218ENST00000557439 CSPG4Q6UVK1 2322 aa13.54□□□□□ -0.24
XRCC3-218ENST00000557439 TMEM158Q8WZ71 300 aa13.53□□□□□ -0.24
XRCC3-218ENST00000557439 IGKV2D-26A0A0A0MRZ7 120 aa13.53□□□□□ -0.24
XRCC3-218ENST00000557439 H3BVH4 76 aa13.53□□□□□ -0.24
XRCC3-218ENST00000557439 IGHV4-38-2P0DP08 117 aa13.53□□□□□ -0.24
XRCC3-218ENST00000557439 Q6ZS46 218 aa13.53□□□□□ -0.24
XRCC3-218ENST00000557439 CFAP46Q8IYW2 2715 aa13.52□□□□□ -0.24
XRCC3-218ENST00000557439 TRBV7-1A0A0A6YYK4 115 aa13.52□□□□□ -0.24
XRCC3-218ENST00000557439 IGHV4-61A0A0C4DH41 118 aa13.52□□□□□ -0.24
XRCC3-218ENST00000557439 KIR3DS1Q14943 382 aa13.52□□□□□ -0.24
XRCC3-218ENST00000557439 C7orf71A4D174 169 aa13.52□□□□□ -0.25
XRCC3-218ENST00000557439 RBAKDNA6NC62 111 aa13.52□□□□□ -0.25
XRCC3-218ENST00000557439 RAB9AP51151 201 aa13.52□□□□□ -0.25
XRCC3-218ENST00000557439 FLNCQ14315 2725 aa13.51□□□□□ -0.25
XRCC3-218ENST00000557439 PRSS1P07477 247 aa13.51□□□□□ -0.25
XRCC3-218ENST00000557439 ARL3P36405 182 aa13.51□□□□□ -0.25
XRCC3-218ENST00000557439 BOD1L2Q8IYS8 172 aa13.51□□□□□ -0.25
XRCC3-218ENST00000557439 GLMPQ8WWB7 406 aa13.51□□□□□ -0.25
XRCC3-218ENST00000557439 KLK15Q9H2R5 256 aa13.51□□□□□ -0.25
XRCC3-218ENST00000557439 PKD1L2Q7Z442 2459 aa13.51□□□□□ -0.25
XRCC3-218ENST00000557439 TMEM238LA0A1B0GVL6 79 aa13.51□□□□□ -0.25
XRCC3-218ENST00000557439 F6UB75 175 aa13.51□□□□□ -0.25
XRCC3-218ENST00000557439 CD5LO43866 347 aa13.51□□□□□ -0.25
XRCC3-218ENST00000557439 SFTPCP11686 197 aa13.51□□□□□ -0.25
XRCC3-218ENST00000557439 SRSF2Q01130 221 aaKnown RBP13.51□□□□□ -0.25
XRCC3-218ENST00000557439 MOB4Q9Y3A3 225 aa13.51□□□□□ -0.25
XRCC3-218ENST00000557439 U3KQE9 123 aa13.51□□□□□ -0.25
XRCC3-218ENST00000557439 K7EP13 123 aa13.5□□□□□ -0.25
XRCC3-218ENST00000557439 S100A7P31151 101 aa13.5□□□□□ -0.25
XRCC3-218ENST00000557439 GPHB5Q86YW7 130 aa13.5□□□□□ -0.25
XRCC3-218ENST00000557439 EDN2P20800 178 aa13.5□□□□□ -0.25
XRCC3-218ENST00000557439 KLK9Q2XQG4 91 aa13.5□□□□□ -0.25
XRCC3-218ENST00000557439 FOXC2Q99958 501 aa13.5□□□□□ -0.25
XRCC3-218ENST00000557439 KLK9Q9UKQ9 250 aa13.5□□□□□ -0.25
XRCC3-218ENST00000557439 FCER1GP30273 86 aa13.49□□□□□ -0.25
XRCC3-218ENST00000557439 RPL11P62913 178 aaKnown RBP13.49□□□□□ -0.25
XRCC3-218ENST00000557439 ODF1Q14990 250 aa13.49□□□□□ -0.25
XRCC3-218ENST00000557439 SPANXN1Q5VSR9 72 aa13.49□□□□□ -0.25
XRCC3-218ENST00000557439 OR2K2Q8NGT1 345 aa13.49□□□□□ -0.25
XRCC3-218ENST00000557439 RAB37Q96AX2 223 aa13.49□□□□□ -0.25
XRCC3-218ENST00000557439 PPBPP02775 128 aa13.49□□□□□ -0.25
XRCC3-218ENST00000557439 SRD5A1P18405 259 aa13.49□□□□□ -0.25
XRCC3-218ENST00000557439 BLCAPP62952 87 aa13.49□□□□□ -0.25
XRCC3-218ENST00000557439 IGHV1-69DA0A0B4J2H0 117 aa13.48□□□□□ -0.25
XRCC3-218ENST00000557439 A1L4Q6 167 aa13.48□□□□□ -0.25
XRCC3-218ENST00000557439 IGHV1-69P01742 117 aa13.48□□□□□ -0.25
XRCC3-218ENST00000557439 IGLV2-18A0A075B6J9 118 aa13.48□□□□□ -0.25
XRCC3-218ENST00000557439 RBX1P62877 108 aa13.48□□□□□ -0.25
XRCC3-218ENST00000557439 C19orf54Q5BKX5 351 aa13.48□□□□□ -0.25
XRCC3-218ENST00000557439 C9orf47Q6ZRZ4 202 aa13.48□□□□□ -0.25
XRCC3-218ENST00000557439 GTSCR1Q86UQ5 136 aa13.48□□□□□ -0.25
XRCC3-218ENST00000557439 NRACQ8N912 160 aa13.48□□□□□ -0.25
XRCC3-218ENST00000557439 K7EMI3 77 aa13.47□□□□□ -0.25
XRCC3-218ENST00000557439 M0R381 172 aa13.47□□□□□ -0.25
XRCC3-218ENST00000557439 RNF151Q2KHN1 245 aa13.47□□□□□ -0.25
XRCC3-218ENST00000557439 OR1N2Q8NGR9 330 aa13.47□□□□□ -0.25
XRCC3-218ENST00000557439 JMJD8Q96S16 334 aa13.47□□□□□ -0.25
XRCC3-218ENST00000557439 ADAMTSL5Q6ZMM2 481 aa13.47□□□□□ -0.25
XRCC3-218ENST00000557439 DEFB104AQ8WTQ1 72 aa13.47□□□□□ -0.25
XRCC3-218ENST00000557439 NXT2Q9NPJ8 142 aaKnown RBP13.47□□□□□ -0.25
XRCC3-218ENST00000557439 HHLA3Q9XRX5 114 aa13.47□□□□□ -0.25
XRCC3-218ENST00000557439 H3BUX3 64 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms