RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 GLYATL2Q8WU03 294 aa2.97□□□□□ -1.93
SCFD1-223ENST00000557076 RMI2Q96E14 147 aa2.97□□□□□ -1.93
SCFD1-223ENST00000557076 S100A16Q96FQ6 103 aaKnown RBP2.97□□□□□ -1.93
SCFD1-223ENST00000557076 PARD6GQ9BYG4 376 aaPredicted RBP2.97□□□□□ -1.93
SCFD1-223ENST00000557076 TMEM222Q9H0R3 208 aa2.97□□□□□ -1.93
SCFD1-223ENST00000557076 ZNF331Q9NQX6 463 aaPredicted RBP2.97□□□□□ -1.93
SCFD1-223ENST00000557076 BLOC1S6Q9UL45 172 aa2.97□□□□□ -1.93
SCFD1-223ENST00000557076 RNF24Q9Y225 148 aa2.97□□□□□ -1.93
SCFD1-223ENST00000557076 TEX13DA0A0J9YY54 714 aaPredicted RBP2.96□□□□□ -1.94
SCFD1-223ENST00000557076 LINC00854A0A1B0GVQ3 168 aa2.96□□□□□ -1.94
SCFD1-223ENST00000557076 C7orf71A4D174 169 aa2.96□□□□□ -1.94
SCFD1-223ENST00000557076 PMS2P5A8MQ11 134 aa2.96□□□□□ -1.94
SCFD1-223ENST00000557076 GGTLC3B5MD39 225 aa2.96□□□□□ -1.94
SCFD1-223ENST00000557076 H3BRN7 92 aa2.96□□□□□ -1.94
SCFD1-223ENST00000557076 PANO1I0J062 215 aa2.96□□□□□ -1.94
SCFD1-223ENST00000557076 MPDU1O75352 247 aa2.96□□□□□ -1.94
SCFD1-223ENST00000557076 HYPMO75409 117 aa2.96□□□□□ -1.94
SCFD1-223ENST00000557076 SDC2P34741 201 aa2.96□□□□□ -1.94
SCFD1-223ENST00000557076 PPT1P50897 306 aa2.96□□□□□ -1.94
SCFD1-223ENST00000557076 PLP1P60201 277 aa2.96□□□□□ -1.94
SCFD1-223ENST00000557076 PNRC1Q12796 327 aaPredicted RBP2.96□□□□□ -1.94
SCFD1-223ENST00000557076 GAGE1Q13065 139 aa2.96□□□□□ -1.94
SCFD1-223ENST00000557076 GAGE4Q13068 117 aa2.96□□□□□ -1.94
SCFD1-223ENST00000557076 CIRBPQ14011 172 aaKnown RBP2.96□□□□□ -1.94
SCFD1-223ENST00000557076 FAM122CQ6P4D5 195 aa2.96□□□□□ -1.94
SCFD1-223ENST00000557076 TMEM182Q6ZP80 229 aaPredicted RBP2.96□□□□□ -1.94
SCFD1-223ENST00000557076 ACOT7LQ6ZUV0 252 aa2.96□□□□□ -1.94
SCFD1-223ENST00000557076 SELENOHQ8IZQ5 122 aaKnown RBP2.96□□□□□ -1.94
SCFD1-223ENST00000557076 C9orf163Q8N9P6 203 aa2.96□□□□□ -1.94
SCFD1-223ENST00000557076 THAP6Q8TBB0 222 aa2.96□□□□□ -1.94
SCFD1-223ENST00000557076 ZFAND1Q8TCF1 268 aa2.96□□□□□ -1.94
SCFD1-223ENST00000557076 DTD1Q8TEA8 209 aa2.96□□□□□ -1.94
SCFD1-223ENST00000557076 GPX8Q8TED1 209 aa2.96□□□□□ -1.94
SCFD1-223ENST00000557076 SLC50A1Q9BRV3 221 aa2.96□□□□□ -1.94
SCFD1-223ENST00000557076 GTSF1LQ9H1H1 148 aa2.96□□□□□ -1.94
SCFD1-223ENST00000557076 SH3BGRL3Q9H299 93 aa2.96□□□□□ -1.94
SCFD1-223ENST00000557076 TXNL4BQ9NX01 149 aaKnown RBP2.96□□□□□ -1.94
SCFD1-223ENST00000557076 MRPL16Q9NX20 251 aaKnown RBP2.96□□□□□ -1.94
SCFD1-223ENST00000557076 COPZ2Q9P299 210 aa2.96□□□□□ -1.94
SCFD1-223ENST00000557076 TP53TG3Q9ULZ0 132 aa2.96□□□□□ -1.94
SCFD1-223ENST00000557076 RPH3ALQ9UNE2 315 aa2.96□□□□□ -1.94
SCFD1-223ENST00000557076 SSR3Q9UNL2 185 aa2.96□□□□□ -1.94
SCFD1-223ENST00000557076 HIGD1AQ9Y241 93 aa2.96□□□□□ -1.94
SCFD1-223ENST00000557076 IGHV1OR15-1A0A075B7D0 117 aa2.95□□□□□ -1.94
SCFD1-223ENST00000557076 FABP12A6NFH5 140 aa2.95□□□□□ -1.94
SCFD1-223ENST00000557076 MRPS12O15235 138 aaKnown RBP2.95□□□□□ -1.94
SCFD1-223ENST00000557076 SEC11BP0C7V7 166 aa2.95□□□□□ -1.94
SCFD1-223ENST00000557076 SMIM18P0DKX4 95 aa2.95□□□□□ -1.94
SCFD1-223ENST00000557076 SULT1A3P0DMM9 295 aa2.95□□□□□ -1.94
SCFD1-223ENST00000557076 SULT1A4P0DMN0 295 aa2.95□□□□□ -1.94
SCFD1-223ENST00000557076 RNASE4P34096 147 aaKnown RBP2.95□□□□□ -1.94
SCFD1-223ENST00000557076 RAB11AP62491 216 aa2.95□□□□□ -1.94
SCFD1-223ENST00000557076 GAGE2BQ13066 116 aa2.95□□□□□ -1.94
SCFD1-223ENST00000557076 GAGE2EQ4V326 116 aa2.95□□□□□ -1.94
SCFD1-223ENST00000557076 GAGE2AQ6NT46 116 aa2.95□□□□□ -1.94
SCFD1-223ENST00000557076 REG3GQ6UW15 175 aa2.95□□□□□ -1.94
SCFD1-223ENST00000557076 SPINK6Q6UWN8 80 aa2.95□□□□□ -1.94
SCFD1-223ENST00000557076 PET117Q6UWS5 81 aa2.95□□□□□ -1.94
SCFD1-223ENST00000557076 LCN15Q6UWW0 184 aa2.95□□□□□ -1.94
SCFD1-223ENST00000557076 DPPA3Q6W0C5 159 aa2.95□□□□□ -1.94
SCFD1-223ENST00000557076 LHFPL1Q86WI0 220 aa2.95□□□□□ -1.94
SCFD1-223ENST00000557076 NHLRC2Q8NBF2 726 aa2.95□□□□□ -1.94
SCFD1-223ENST00000557076 OR10P1Q8NGE3 313 aa2.95□□□□□ -1.94
SCFD1-223ENST00000557076 TERB2Q8NHR7 220 aa2.95□□□□□ -1.94
SCFD1-223ENST00000557076 RNF185Q96GF1 192 aa2.95□□□□□ -1.94
SCFD1-223ENST00000557076 FAM19A4Q96LR4 140 aa2.95□□□□□ -1.94
SCFD1-223ENST00000557076 LINC00477Q96M19 166 aa2.95□□□□□ -1.94
SCFD1-223ENST00000557076 SPXQ9BT56 116 aa2.95□□□□□ -1.94
SCFD1-223ENST00000557076 GFRA4Q9GZZ7 299 aa2.95□□□□□ -1.94
SCFD1-223ENST00000557076 GAGE2DQ9UEU5 116 aa2.95□□□□□ -1.94
SCFD1-223ENST00000557076 TRAV4A0A0B4J268 109 aa2.94□□□□□ -1.94
SCFD1-223ENST00000557076 IGKV3D-20A0A0C4DH25 116 aa2.94□□□□□ -1.94
SCFD1-223ENST00000557076 LOC100131303A0A0U1RQF7 123 aa2.94□□□□□ -1.94
SCFD1-223ENST00000557076 PITX3O75364 302 aa2.94□□□□□ -1.94
SCFD1-223ENST00000557076 IL5P05113 134 aa2.94□□□□□ -1.94
SCFD1-223ENST00000557076 GPX1P07203 203 aa2.94□□□□□ -1.94
SCFD1-223ENST00000557076 GATA1P15976 413 aaPredicted RBP2.94□□□□□ -1.94
SCFD1-223ENST00000557076 CRISP2P16562 243 aa2.94□□□□□ -1.94
SCFD1-223ENST00000557076 CCR6P51684 374 aa2.94□□□□□ -1.94
SCFD1-223ENST00000557076 SELENOTP62341 195 aa2.94□□□□□ -1.94
SCFD1-223ENST00000557076 SRSF9Q13242 221 aaKnown RBP eCLIP2.94□□□□□ -1.94
SCFD1-223ENST00000557076 OPCMLQ14982 345 aa2.94□□□□□ -1.94
SCFD1-223ENST00000557076 LCE3CQ5T5A8 94 aa2.94□□□□□ -1.94
SCFD1-223ENST00000557076 ATRAIDQ6UW56 229 aa2.94□□□□□ -1.94
SCFD1-223ENST00000557076 PATE2Q6UY27 113 aa2.94□□□□□ -1.94
SCFD1-223ENST00000557076 DAZ4Q86SG3 579 aaKnown RBP2.94□□□□□ -1.94
SCFD1-223ENST00000557076 CCDC71LQ8N9Z2 235 aa2.94□□□□□ -1.94
SCFD1-223ENST00000557076 OR4C5Q8NGB2 326 aa2.94□□□□□ -1.94
SCFD1-223ENST00000557076 LHFPL5Q8TAF8 219 aa2.94□□□□□ -1.94
SCFD1-223ENST00000557076 DPH3Q96FX2 82 aa2.94□□□□□ -1.94
SCFD1-223ENST00000557076 ZC2HC1AQ96GY0 325 aa2.94□□□□□ -1.94
SCFD1-223ENST00000557076 C2orf50Q96LR7 162 aa2.94□□□□□ -1.94
SCFD1-223ENST00000557076 RBKSQ9H477 322 aa2.94□□□□□ -1.94
SCFD1-223ENST00000557076 DAZ3Q9NR90 486 aaKnown RBP2.94□□□□□ -1.94
SCFD1-223ENST00000557076 PXMP4Q9Y6I8 212 aa2.94□□□□□ -1.94
SCFD1-223ENST00000557076 IGKV2D-24A0A075B6R9 120 aa2.93□□□□□ -1.94
SCFD1-223ENST00000557076 PRSS46E5RG02 174 aa2.93□□□□□ -1.94
SCFD1-223ENST00000557076 TAAR5O14804 337 aa2.93□□□□□ -1.94
SCFD1-223ENST00000557076 CIDEAO60543 219 aa2.93□□□□□ -1.94
SCFD1-223ENST00000557076 OR5G3P0C626 314 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms