RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 YIPF6Q96EC8 236 aa7.83□□□□□ -1.16
PSEN1-220ENST00000557037 MRPL53Q96EL3 112 aaKnown RBP7.83□□□□□ -1.16
PSEN1-220ENST00000557037 CNBD2Q96M20 576 aa7.83□□□□□ -1.16
PSEN1-220ENST00000557037 CIB3Q96Q77 187 aaPredicted RBP7.83□□□□□ -1.16
PSEN1-220ENST00000557037 NAGKQ9UJ70 344 aa7.83□□□□□ -1.16
PSEN1-220ENST00000557037 KCNIP3Q9Y2W7 256 aa7.83□□□□□ -1.16
PSEN1-220ENST00000557037 STRAPQ9Y3F4 350 aaKnown RBP7.83□□□□□ -1.16
PSEN1-220ENST00000557037 TRBV6-4A0A1B0GX49 114 aa7.82□□□□□ -1.16
PSEN1-220ENST00000557037 GAGE12JA6NER3 117 aa7.82□□□□□ -1.16
PSEN1-220ENST00000557037 MED6O75586 246 aa7.82□□□□□ -1.16
PSEN1-220ENST00000557037 HLA-DQA1P01909 254 aa7.82□□□□□ -1.16
PSEN1-220ENST00000557037 GAGE1Q13065 139 aa7.82□□□□□ -1.16
PSEN1-220ENST00000557037 GAGE4Q13068 117 aa7.82□□□□□ -1.16
PSEN1-220ENST00000557037 GAGE5Q13069 117 aa7.82□□□□□ -1.16
PSEN1-220ENST00000557037 GUK1Q16774 197 aa7.82□□□□□ -1.16
PSEN1-220ENST00000557037 GAGE13Q4V321 117 aa7.82□□□□□ -1.16
PSEN1-220ENST00000557037 ATRAIDQ6UW56 229 aa7.82□□□□□ -1.16
PSEN1-220ENST00000557037 SPINK6Q6UWN8 80 aa7.82□□□□□ -1.16
PSEN1-220ENST00000557037 EXOC3-AS1Q8N2X6 119 aa7.82□□□□□ -1.16
PSEN1-220ENST00000557037 C1orf43Q9BWL3 253 aa7.82□□□□□ -1.16
PSEN1-220ENST00000557037 MTFP1Q9UDX5 166 aa7.82□□□□□ -1.16
PSEN1-220ENST00000557037 GPR132Q9UNW8 380 aa7.82□□□□□ -1.16
PSEN1-220ENST00000557037 GOSR2O14653 212 aa7.81□□□□□ -1.16
PSEN1-220ENST00000557037 AGPAT2O15120 278 aa7.81□□□□□ -1.16
PSEN1-220ENST00000557037 GNRH2O43555 120 aa7.81□□□□□ -1.16
PSEN1-220ENST00000557037 SYNGR2O43760 224 aa7.81□□□□□ -1.16
PSEN1-220ENST00000557037 APOA1P02647 267 aa7.81□□□□□ -1.16
PSEN1-220ENST00000557037 SEC11BP0C7V7 166 aa7.81□□□□□ -1.16
PSEN1-220ENST00000557037 RAB31Q13636 194 aa7.81□□□□□ -1.16
PSEN1-220ENST00000557037 PXDC1Q5TGL8 231 aa7.81□□□□□ -1.16
PSEN1-220ENST00000557037 C10orf113Q5VZT2 155 aa7.81□□□□□ -1.16
PSEN1-220ENST00000557037 FAM159AQ6UWV7 190 aa7.81□□□□□ -1.16
PSEN1-220ENST00000557037 TMEM229BQ8NBD8 167 aa7.81□□□□□ -1.16
PSEN1-220ENST00000557037 SOSTQ9BQB4 213 aa7.81□□□□□ -1.16
PSEN1-220ENST00000557037 ZNF492Q9P255 531 aa7.81□□□□□ -1.16
PSEN1-220ENST00000557037 HPGDSO60760 199 aa7.8□□□□□ -1.16
PSEN1-220ENST00000557037 NDUFB4O95168 129 aa7.8□□□□□ -1.16
PSEN1-220ENST00000557037 HIST1H1EP10412 219 aaKnown RBP7.8□□□□□ -1.16
PSEN1-220ENST00000557037 TAS2R19P59542 299 aa7.8□□□□□ -1.16
PSEN1-220ENST00000557037 RPL19P84098 196 aaKnown RBP7.8□□□□□ -1.16
PSEN1-220ENST00000557037 SURF2Q15527 256 aaPredicted RBP7.8□□□□□ -1.16
PSEN1-220ENST00000557037 PRR4Q16378 134 aa7.8□□□□□ -1.16
PSEN1-220ENST00000557037 CFAP126Q5VTH2 177 aa7.8□□□□□ -1.16
PSEN1-220ENST00000557037 ZNF546Q86UE3 836 aa7.8□□□□□ -1.16
PSEN1-220ENST00000557037 SPACA4Q8TDM5 124 aa7.8□□□□□ -1.16
PSEN1-220ENST00000557037 RNF185Q96GF1 192 aa7.8□□□□□ -1.16
PSEN1-220ENST00000557037 SH3BGRL3Q9H299 93 aa7.8□□□□□ -1.16
PSEN1-220ENST00000557037 VAX2Q9UIW0 290 aa7.8□□□□□ -1.16
PSEN1-220ENST00000557037 PRELID1Q9Y255 219 aa7.8□□□□□ -1.16
PSEN1-220ENST00000557037 TRBV19A0A075B6N1 114 aa7.79□□□□□ -1.16
PSEN1-220ENST00000557037 K7EPK0 472 aa7.79□□□□□ -1.16
PSEN1-220ENST00000557037 ZNF138P52744 262 aa7.79□□□□□ -1.16
PSEN1-220ENST00000557037 GABARAPL2P60520 117 aa7.79□□□□□ -1.16
PSEN1-220ENST00000557037 NRG4Q8WWG1 115 aa7.79□□□□□ -1.16
PSEN1-220ENST00000557037 PLAC8Q9NZF1 115 aa7.79□□□□□ -1.16
PSEN1-220ENST00000557037 TIMM9Q9Y5J7 89 aa7.79□□□□□ -1.16
PSEN1-220ENST00000557037 A0A087WX48 190 aa7.78□□□□□ -1.16
PSEN1-220ENST00000557037 H7C1H1 209 aa7.78□□□□□ -1.16
PSEN1-220ENST00000557037 LSM3P62310 102 aaKnown RBP7.78□□□□□ -1.16
PSEN1-220ENST00000557037 ZNF266Q14584 549 aa7.78□□□□□ -1.16
PSEN1-220ENST00000557037 CYB561D1Q8N8Q1 229 aa7.78□□□□□ -1.16
PSEN1-220ENST00000557037 CCDC59Q9P031 241 aaKnown RBP7.78□□□□□ -1.16
PSEN1-220ENST00000557037 Q9UF83 564 aa7.78□□□□□ -1.16
PSEN1-220ENST00000557037 A0A087WWC5 75 aa7.77□□□□□ -1.17
PSEN1-220ENST00000557037 FAM25AB3EWG3 89 aa7.77□□□□□ -1.17
PSEN1-220ENST00000557037 FAM25CB3EWG5 89 aa7.77□□□□□ -1.17
PSEN1-220ENST00000557037 FAM25GB3EWG6 89 aa7.77□□□□□ -1.17
PSEN1-220ENST00000557037 DISC1C4P0D8 188 aa7.77□□□□□ -1.17
PSEN1-220ENST00000557037 TAAR5O14804 337 aa7.77□□□□□ -1.17
PSEN1-220ENST00000557037 LINC00694P0DN24 101 aa7.77□□□□□ -1.17
PSEN1-220ENST00000557037 Q0VG73 95 aa7.77□□□□□ -1.17
PSEN1-220ENST00000557037 ELOBQ15370 118 aa7.77□□□□□ -1.17
PSEN1-220ENST00000557037 ENHOQ6UWT2 76 aa7.77□□□□□ -1.17
PSEN1-220ENST00000557037 LYPD6BQ8NI32 183 aa7.77□□□□□ -1.17
PSEN1-220ENST00000557037 NPVFQ9HCQ7 196 aa7.77□□□□□ -1.17
PSEN1-220ENST00000557037 IGHV3-64A0A075B6Q5 118 aa7.76□□□□□ -1.17
PSEN1-220ENST00000557037 SRPXP78539 464 aa7.76□□□□□ -1.17
PSEN1-220ENST00000557037 SRSF9Q13242 221 aaKnown RBP eCLIP7.76□□□□□ -1.17
PSEN1-220ENST00000557037 PGPA6NDG6 321 aa7.75□□□□□ -1.17
PSEN1-220ENST00000557037 ANXA3P12429 323 aa7.75□□□□□ -1.17
PSEN1-220ENST00000557037 INPP1P49441 399 aa7.75□□□□□ -1.17
PSEN1-220ENST00000557037 ZNF876PQ49A33 203 aa7.75□□□□□ -1.17
PSEN1-220ENST00000557037 Q6AWC8 147 aa7.75□□□□□ -1.17
PSEN1-220ENST00000557037 OR10G9Q8NGN4 311 aa7.75□□□□□ -1.17
PSEN1-220ENST00000557037 SAMD10Q9BYL1 202 aa7.75□□□□□ -1.17
PSEN1-220ENST00000557037 C20orf85Q9H1P6 137 aa7.75□□□□□ -1.17
PSEN1-220ENST00000557037 PSENENQ9NZ42 101 aa7.75□□□□□ -1.17
PSEN1-220ENST00000557037 MGAT4CQ9UBM8 478 aa7.75□□□□□ -1.17
PSEN1-220ENST00000557037 MUC21A0A0G2JKD1 596 aa7.74□□□□□ -1.17
PSEN1-220ENST00000557037 FAM231BA6NCW3 169 aa7.74□□□□□ -1.17
PSEN1-220ENST00000557037 A6NJY4 79 aa7.74□□□□□ -1.17
PSEN1-220ENST00000557037 CRPP02741 224 aa7.74□□□□□ -1.17
PSEN1-220ENST00000557037 TYMSP04818 313 aa7.74□□□□□ -1.17
PSEN1-220ENST00000557037 METTL15P1P0C7V9 234 aa7.74□□□□□ -1.17
PSEN1-220ENST00000557037 PYYP10082 97 aa7.74□□□□□ -1.17
PSEN1-220ENST00000557037 MGST1P10620 155 aaKnown RBP7.74□□□□□ -1.17
PSEN1-220ENST00000557037 CAV2P51636 162 aa7.74□□□□□ -1.17
PSEN1-220ENST00000557037 NEDD8Q15843 81 aa7.74□□□□□ -1.17
PSEN1-220ENST00000557037 KCNIP4Q6PIL6 250 aa7.74□□□□□ -1.17
PSEN1-220ENST00000557037 C15orf54Q8N8G6 183 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms