RNA–Protein interactions for RNA: ENST00000556909.1

VIPAS39-209, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-209ENST00000556909 FAM167A-AS1Q96KT0 104 aa12.42□□□□□ -0.42
VIPAS39-209ENST00000556909 GPN1Q9HCN4 374 aaPredicted RBP12.42□□□□□ -0.42
VIPAS39-209ENST00000556909 NUDT15Q9NV35 164 aa12.42□□□□□ -0.42
VIPAS39-209ENST00000556909 LY96Q9Y6Y9 160 aa12.42□□□□□ -0.42
VIPAS39-209ENST00000556909 IL15RAQ13261 267 aa12.41□□□□□ -0.42
VIPAS39-209ENST00000556909 ATP6V1FQ16864 119 aa12.41□□□□□ -0.42
VIPAS39-209ENST00000556909 MIR17HGQ75NE6 70 aa12.41□□□□□ -0.42
VIPAS39-209ENST00000556909 TRAV9-2A0A087WT02 112 aa12.4□□□□□ -0.42
VIPAS39-209ENST00000556909 ZNF138P52744 262 aa12.4□□□□□ -0.42
VIPAS39-209ENST00000556909 WFDC10BQ8IUB3 73 aa12.4□□□□□ -0.42
VIPAS39-209ENST00000556909 FLG2Q5D862 2391 aaPredicted RBP12.39□□□□□ -0.43
VIPAS39-209ENST00000556909 TRGV4A0A0C4DH28 118 aa12.39□□□□□ -0.43
VIPAS39-209ENST00000556909 E5RGE8 158 aa12.39□□□□□ -0.43
VIPAS39-209ENST00000556909 K7EQD1 137 aa12.39□□□□□ -0.43
VIPAS39-209ENST00000556909 IFNA5P01569 189 aa12.39□□□□□ -0.43
VIPAS39-209ENST00000556909 NBEAP1P0C6P0 100 aa12.39□□□□□ -0.43
VIPAS39-209ENST00000556909 SRIP30626 198 aa12.39□□□□□ -0.43
VIPAS39-209ENST00000556909 THAP6Q8TBB0 222 aa12.39□□□□□ -0.43
VIPAS39-209ENST00000556909 FRZBQ92765 325 aa12.39□□□□□ -0.43
VIPAS39-209ENST00000556909 MRPL32Q9BYC8 188 aaKnown RBP12.39□□□□□ -0.43
VIPAS39-209ENST00000556909 MSRB1Q9NZV6 116 aa12.39□□□□□ -0.43
VIPAS39-209ENST00000556909 TRBV7-9A0A0J9YWB2 115 aa12.38□□□□□ -0.43
VIPAS39-209ENST00000556909 SFTA3P0C7M3 94 aa12.38□□□□□ -0.43
VIPAS39-209ENST00000556909 MUC21Q5SSG8 566 aa12.38□□□□□ -0.43
VIPAS39-209ENST00000556909 FXYD5Q96DB9 178 aa12.38□□□□□ -0.43
VIPAS39-209ENST00000556909 PHYHIPLQ96FC7 376 aa12.38□□□□□ -0.43
VIPAS39-209ENST00000556909 OR51M1Q9H341 326 aa12.38□□□□□ -0.43
VIPAS39-209ENST00000556909 MDFICQ9P1T7 246 aa12.38□□□□□ -0.43
VIPAS39-209ENST00000556909 SRRM2Q9UQ35 2752 aaKnown RBP12.37□□□□□ -0.43
VIPAS39-209ENST00000556909 K7EP13 123 aa12.37□□□□□ -0.43
VIPAS39-209ENST00000556909 OR10J4P0C629 311 aa12.37□□□□□ -0.43
VIPAS39-209ENST00000556909 ZNF266Q14584 549 aa12.37□□□□□ -0.43
VIPAS39-209ENST00000556909 IQCF2Q8IXL9 164 aa12.37□□□□□ -0.43
VIPAS39-209ENST00000556909 OR10G4Q8NGN3 311 aa12.37□□□□□ -0.43
VIPAS39-209ENST00000556909 PCNPQ8WW12 178 aaKnown RBP12.37□□□□□ -0.43
VIPAS39-209ENST00000556909 ZNF479Q96JC4 524 aa12.37□□□□□ -0.43
VIPAS39-209ENST00000556909 PAXXQ9BUH6 204 aa12.37□□□□□ -0.43
VIPAS39-209ENST00000556909 GYPEP15421 78 aa12.36□□□□□ -0.43
VIPAS39-209ENST00000556909 EVI2AP22794 236 aa12.36□□□□□ -0.43
VIPAS39-209ENST00000556909 NHLH2Q02577 135 aa12.36□□□□□ -0.43
VIPAS39-209ENST00000556909 OR5C1Q8NGR4 320 aa12.36□□□□□ -0.43
VIPAS39-209ENST00000556909 H2AFB2P0C5Z0 115 aa12.35□□□□□ -0.43
VIPAS39-209ENST00000556909 RASL10AQ92737 203 aa12.35□□□□□ -0.43
VIPAS39-209ENST00000556909 RBAKDNA6NC62 111 aa12.34□□□□□ -0.43
VIPAS39-209ENST00000556909 ORM1P02763 201 aa12.34□□□□□ -0.43
VIPAS39-209ENST00000556909 GCSHP23434 173 aa12.34□□□□□ -0.43
VIPAS39-209ENST00000556909 TMEM183BQ1AE95 376 aa12.34□□□□□ -0.43
VIPAS39-209ENST00000556909 Q6AWC8 147 aa12.34□□□□□ -0.43
VIPAS39-209ENST00000556909 TMEM183AQ8IXX5 376 aa12.34□□□□□ -0.43
VIPAS39-209ENST00000556909 KCNIP2Q9NS61 270 aa12.34□□□□□ -0.43
VIPAS39-209ENST00000556909 DNAH8Q96JB1 4490 aa12.34□□□□□ -0.43
VIPAS39-209ENST00000556909 SMR3BP02814 79 aaPredicted RBP12.33□□□□□ -0.44
VIPAS39-209ENST00000556909 CRYGDP07320 174 aa12.33□□□□□ -0.44
VIPAS39-209ENST00000556909 CSN1S1P47710 185 aa12.33□□□□□ -0.44
VIPAS39-209ENST00000556909 SPXQ9BT56 116 aa12.33□□□□□ -0.44
VIPAS39-209ENST00000556909 TRGV11A0A075B6L2 103 aa12.32□□□□□ -0.44
VIPAS39-209ENST00000556909 C9JCJ5 164 aa12.32□□□□□ -0.44
VIPAS39-209ENST00000556909 OR7C2O60412 319 aa12.32□□□□□ -0.44
VIPAS39-209ENST00000556909 RANP62826 216 aaKnown RBP12.32□□□□□ -0.44
VIPAS39-209ENST00000556909 HAMPP81172 84 aa12.32□□□□□ -0.44
VIPAS39-209ENST00000556909 FAM159AQ6UWV7 190 aa12.32□□□□□ -0.44
VIPAS39-209ENST00000556909 C10orf126Q8N4M7 172 aa12.32□□□□□ -0.44
VIPAS39-209ENST00000556909 TXNDC17Q9BRA2 123 aa12.32□□□□□ -0.44
VIPAS39-209ENST00000556909 WDR61Q9GZS3 305 aaKnown RBP12.32□□□□□ -0.44
VIPAS39-209ENST00000556909 SLC25A31Q9H0C2 315 aa12.32□□□□□ -0.44
VIPAS39-209ENST00000556909 TRAV4A0A0B4J268 109 aa12.31□□□□□ -0.44
VIPAS39-209ENST00000556909 UBE2L3P68036 154 aaKnown RBP12.31□□□□□ -0.44
VIPAS39-209ENST00000556909 OR5AC2Q9NZP5 309 aa12.31□□□□□ -0.44
VIPAS39-209ENST00000556909 LENEPQ9Y5L5 61 aa12.31□□□□□ -0.44
VIPAS39-209ENST00000556909 LOC100131303A0A0U1RQF7 123 aa12.3□□□□□ -0.44
VIPAS39-209ENST00000556909 FAM240BA0A1B0GVZ2 78 aa12.3□□□□□ -0.44
VIPAS39-209ENST00000556909 DIRC3C9JPN6 131 aa12.3□□□□□ -0.44
VIPAS39-209ENST00000556909 NAGKQ9UJ70 344 aa12.3□□□□□ -0.44
VIPAS39-209ENST00000556909 IGLV5-52A0A0A0MRZ9 124 aa12.29□□□□□ -0.44
VIPAS39-209ENST00000556909 LRCOL1A6NCL2 159 aa12.29□□□□□ -0.44
VIPAS39-209ENST00000556909 SIX6O95475 246 aa12.29□□□□□ -0.44
VIPAS39-209ENST00000556909 TDRG1Q3Y452 100 aa12.29□□□□□ -0.44
VIPAS39-209ENST00000556909 OR4C5Q8NGB2 326 aa12.29□□□□□ -0.44
VIPAS39-209ENST00000556909 CCDC32Q9BV29 185 aa12.29□□□□□ -0.44
VIPAS39-209ENST00000556909 C17orf112F2Z3M2 114 aa12.28□□□□□ -0.44
VIPAS39-209ENST00000556909 H0YIZ8 118 aa12.28□□□□□ -0.44
VIPAS39-209ENST00000556909 M0R2P5 195 aa12.28□□□□□ -0.44
VIPAS39-209ENST00000556909 LRRC37A5PQ49AS3 106 aa12.28□□□□□ -0.44
VIPAS39-209ENST00000556909 TMED6Q8WW62 240 aa12.28□□□□□ -0.44
VIPAS39-209ENST00000556909 IGHV3-16A0A0C4DH30 117 aa12.27□□□□□ -0.45
VIPAS39-209ENST00000556909 IGHV3-38A0A0C4DH36 116 aa12.27□□□□□ -0.45
VIPAS39-209ENST00000556909 FAM229AH3BQW9 127 aa12.27□□□□□ -0.45
VIPAS39-209ENST00000556909 PSCAO43653 123 aa12.27□□□□□ -0.45
VIPAS39-209ENST00000556909 TIRAPP58753 221 aa12.27□□□□□ -0.45
VIPAS39-209ENST00000556909 KHDC3LQ587J8 217 aa12.27□□□□□ -0.45
VIPAS39-209ENST00000556909 Q6ZSN1 163 aa12.27□□□□□ -0.45
VIPAS39-209ENST00000556909 SH2D6Q7Z4S9 175 aa12.27□□□□□ -0.45
VIPAS39-209ENST00000556909 NHLRC2Q8NBF2 726 aa12.27□□□□□ -0.45
VIPAS39-209ENST00000556909 NTN5Q8WTR8 489 aaPredicted RBP12.27□□□□□ -0.45
VIPAS39-209ENST00000556909 TMEM70Q9BUB7 260 aa12.27□□□□□ -0.45
VIPAS39-209ENST00000556909 NMES1Q9C002 83 aa12.27□□□□□ -0.45
VIPAS39-209ENST00000556909 GNRH2O43555 120 aa12.26□□□□□ -0.45
VIPAS39-209ENST00000556909 PPT1P50897 306 aa12.26□□□□□ -0.45
VIPAS39-209ENST00000556909 LINC01556Q5JQF7 62 aa12.26□□□□□ -0.45
VIPAS39-209ENST00000556909 FFAR4Q5NUL3 377 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms