RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 PSMB8P28062 276 aa7.68□□□□□ -1.18
TMEM260-211ENST00000556648 TWIST1Q15672 202 aa7.68□□□□□ -1.18
TMEM260-211ENST00000556648 MRPL51Q4U2R6 128 aaKnown RBP7.68□□□□□ -1.18
TMEM260-211ENST00000556648 FAM104BQ5XKR9 115 aa7.68□□□□□ -1.18
TMEM260-211ENST00000556648 C9orf47Q6ZRZ4 202 aa7.68□□□□□ -1.18
TMEM260-211ENST00000556648 Q96MF0 132 aa7.68□□□□□ -1.18
TMEM260-211ENST00000556648 C20orf144Q9BQM9 153 aa7.68□□□□□ -1.18
TMEM260-211ENST00000556648 RHPN1-AS1Q9BWJ2 59 aa7.68□□□□□ -1.18
TMEM260-211ENST00000556648 BEX4Q9NWD9 120 aaPredicted RBP7.68□□□□□ -1.18
TMEM260-211ENST00000556648 A0A0G2JLM5 398 aa7.68□□□□□ -1.18
TMEM260-211ENST00000556648 GAS8-AS1O95177 125 aa7.68□□□□□ -1.18
TMEM260-211ENST00000556648 RPLP1P05386 114 aaKnown RBP7.68□□□□□ -1.18
TMEM260-211ENST00000556648 RPL11P62913 178 aaKnown RBP7.68□□□□□ -1.18
TMEM260-211ENST00000556648 SRSF2Q01130 221 aaKnown RBP7.68□□□□□ -1.18
TMEM260-211ENST00000556648 PEF1Q9UBV8 284 aaKnown RBP7.68□□□□□ -1.18
TMEM260-211ENST00000556648 TIMM8BQ9Y5J9 83 aaPredicted RBP7.68□□□□□ -1.18
TMEM260-211ENST00000556648 U3KQK5 164 aa7.68□□□□□ -1.18
TMEM260-211ENST00000556648 LOC389332A0A1B0GUA5 103 aa7.67□□□□□ -1.18
TMEM260-211ENST00000556648 SPATA45Q537H7 98 aa7.67□□□□□ -1.18
TMEM260-211ENST00000556648 Q6YL49 198 aa7.67□□□□□ -1.18
TMEM260-211ENST00000556648 RNF185Q96GF1 192 aa7.67□□□□□ -1.18
TMEM260-211ENST00000556648 DUX5Q96PT3 197 aa7.67□□□□□ -1.18
TMEM260-211ENST00000556648 MCRIP2Q9BUT9 160 aaKnown RBP7.67□□□□□ -1.18
TMEM260-211ENST00000556648 ZNF702PQ9H963 129 aa7.67□□□□□ -1.18
TMEM260-211ENST00000556648 VPREB3Q9UKI3 123 aa7.67□□□□□ -1.18
TMEM260-211ENST00000556648 HOXA3O43365 443 aaPredicted RBP7.66□□□□□ -1.18
TMEM260-211ENST00000556648 BTF3P20290 206 aaKnown RBP7.66□□□□□ -1.18
TMEM260-211ENST00000556648 IFI27P40305 119 aaPredicted RBP7.66□□□□□ -1.18
TMEM260-211ENST00000556648 HIST1H1AQ02539 215 aaPredicted RBP7.66□□□□□ -1.18
TMEM260-211ENST00000556648 PRELID3AQ96N28 172 aa7.66□□□□□ -1.18
TMEM260-211ENST00000556648 ZNF580Q9UK33 172 aa7.66□□□□□ -1.18
TMEM260-211ENST00000556648 LRRK2Q5S007 2527 aa7.66□□□□□ -1.18
TMEM260-211ENST00000556648 SPRY2O43597 315 aa7.66□□□□□ -1.18
TMEM260-211ENST00000556648 NPYP01303 97 aa7.66□□□□□ -1.18
TMEM260-211ENST00000556648 KIR3DS1Q14943 382 aa7.66□□□□□ -1.18
TMEM260-211ENST00000556648 ZNF705AQ6ZN79 300 aaPredicted RBP7.66□□□□□ -1.18
TMEM260-211ENST00000556648 ZFAND2AQ8N6M9 145 aa7.66□□□□□ -1.18
TMEM260-211ENST00000556648 CNFNQ9BYD5 112 aa7.66□□□□□ -1.18
TMEM260-211ENST00000556648 DAZ1Q9NQZ3 744 aaKnown RBP7.66□□□□□ -1.18
TMEM260-211ENST00000556648 SIGLEC8Q9NYZ4 499 aa7.66□□□□□ -1.18
TMEM260-211ENST00000556648 SMPXQ9UHP9 88 aa7.66□□□□□ -1.18
TMEM260-211ENST00000556648 ZANQ9Y493 2812 aa7.66□□□□□ -1.18
TMEM260-211ENST00000556648 A0A1B0GV90 55 aa7.65□□□□□ -1.18
TMEM260-211ENST00000556648 FXYD7P58549 80 aa7.65□□□□□ -1.18
TMEM260-211ENST00000556648 OR10AG1Q8NH19 301 aa7.65□□□□□ -1.18
TMEM260-211ENST00000556648 SNHG12Q9BXW3 62 aa7.65□□□□□ -1.18
TMEM260-211ENST00000556648 A0A096LNJ9 63 aa7.64□□□□□ -1.19
TMEM260-211ENST00000556648 H0Y8G0 127 aa7.64□□□□□ -1.19
TMEM260-211ENST00000556648 LEPROTL1O95214 131 aa7.64□□□□□ -1.19
TMEM260-211ENST00000556648 PRSS57Q6UWY2 283 aa7.64□□□□□ -1.19
TMEM260-211ENST00000556648 FA2HQ7L5A8 372 aa7.64□□□□□ -1.19
TMEM260-211ENST00000556648 WFDC3Q8IUB2 231 aa7.64□□□□□ -1.19
TMEM260-211ENST00000556648 ORMDL3Q8N138 153 aa7.64□□□□□ -1.19
TMEM260-211ENST00000556648 PRSS3P2Q8NHM4 247 aa7.64□□□□□ -1.19
TMEM260-211ENST00000556648 MIEN1Q9BRT3 115 aa7.64□□□□□ -1.19
TMEM260-211ENST00000556648 TMEM70Q9BUB7 260 aa7.64□□□□□ -1.19
TMEM260-211ENST00000556648 OVOL1O14753 267 aa7.64□□□□□ -1.19
TMEM260-211ENST00000556648 GATA1P15976 413 aaPredicted RBP7.64□□□□□ -1.19
TMEM260-211ENST00000556648 RAB4AP20338 218 aa7.64□□□□□ -1.19
TMEM260-211ENST00000556648 HIST2H2BDQ6DRA6 164 aa7.64□□□□□ -1.19
TMEM260-211ENST00000556648 LRRC75A-AS1Q8N1F1 130 aa7.64□□□□□ -1.19
TMEM260-211ENST00000556648 OR10J6PQ8NGY7 276 aa7.64□□□□□ -1.19
TMEM260-211ENST00000556648 TMEM191AQ9H0A3 160 aa7.64□□□□□ -1.19
TMEM260-211ENST00000556648 AP5S1Q9NUS5 200 aa7.64□□□□□ -1.19
TMEM260-211ENST00000556648 PPP1R14DQ9NXH3 145 aa7.64□□□□□ -1.19
TMEM260-211ENST00000556648 TP73-AS1Q9UF72 201 aa7.64□□□□□ -1.19
TMEM260-211ENST00000556648 PRRC2AP48634 2157 aaKnown RBP7.63□□□□□ -1.19
TMEM260-211ENST00000556648 PTPN13Q12923 2485 aa7.63□□□□□ -1.19
TMEM260-211ENST00000556648 USP9YO00507 2555 aaPredicted RBP7.63□□□□□ -1.19
TMEM260-211ENST00000556648 IGHV4OR15-8A0A075B7B6 117 aa7.63□□□□□ -1.19
TMEM260-211ENST00000556648 A0A087WW49 117 aa7.63□□□□□ -1.19
TMEM260-211ENST00000556648 SYS1-DBNDD2H3BUS1 97 aa7.63□□□□□ -1.19
TMEM260-211ENST00000556648 H3BVH4 76 aa7.63□□□□□ -1.19
TMEM260-211ENST00000556648 EVI2AP22794 236 aa7.63□□□□□ -1.19
TMEM260-211ENST00000556648 CKS2P33552 79 aa7.63□□□□□ -1.19
TMEM260-211ENST00000556648 DMRTA1Q5VZB9 504 aa7.63□□□□□ -1.19
TMEM260-211ENST00000556648 C18orf65Q6ZTR6 163 aa7.63□□□□□ -1.19
TMEM260-211ENST00000556648 OR8A1Q8NGG7 326 aa7.63□□□□□ -1.19
TMEM260-211ENST00000556648 FAM19A4Q96LR4 140 aa7.63□□□□□ -1.19
TMEM260-211ENST00000556648 PMCHL2Q9BQD1 86 aa7.63□□□□□ -1.19
TMEM260-211ENST00000556648 TFPI2P48307 235 aa7.62□□□□□ -1.19
TMEM260-211ENST00000556648 WFDC11Q8NEX6 87 aa7.62□□□□□ -1.19
TMEM260-211ENST00000556648 WFDC12Q8WWY7 111 aa7.62□□□□□ -1.19
TMEM260-211ENST00000556648 LINC00477Q96M19 166 aa7.62□□□□□ -1.19
TMEM260-211ENST00000556648 C2orf88Q9BSF0 95 aa7.62□□□□□ -1.19
TMEM260-211ENST00000556648 EPG5Q9HCE0 2579 aa7.62□□□□□ -1.19
TMEM260-211ENST00000556648 K7EMT4 169 aa7.62□□□□□ -1.19
TMEM260-211ENST00000556648 OR5AL1P0C617 328 aa7.62□□□□□ -1.19
TMEM260-211ENST00000556648 IGLC3P0DOY3 106 aa7.62□□□□□ -1.19
TMEM260-211ENST00000556648 RNASE4P34096 147 aaKnown RBP7.62□□□□□ -1.19
TMEM260-211ENST00000556648 SYNJ2BPP57105 145 aa7.62□□□□□ -1.19
TMEM260-211ENST00000556648 CYB5R2Q6BCY4 276 aa7.62□□□□□ -1.19
TMEM260-211ENST00000556648 MYOZ3Q8TDC0 251 aa7.62□□□□□ -1.19
TMEM260-211ENST00000556648 DCANP1Q8TF63 244 aa7.62□□□□□ -1.19
TMEM260-211ENST00000556648 ABCA12Q86UK0 2595 aa7.61□□□□□ -1.19
TMEM260-211ENST00000556648 TRAV9-2A0A087WT02 112 aa7.61□□□□□ -1.19
TMEM260-211ENST00000556648 hDV102S1A0JD36 115 aa7.61□□□□□ -1.19
TMEM260-211ENST00000556648 OR4C46A6NHA9 309 aa7.61□□□□□ -1.19
TMEM260-211ENST00000556648 CRXO43186 299 aaPredicted RBP7.61□□□□□ -1.19
TMEM260-211ENST00000556648 LGALS1P09382 135 aaKnown RBP7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms