RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 PRELID1Q9Y255 219 aa9.23□□□□□ -0.93
ACTN1-219ENST00000556432 TRBV19A0A075B6N1 114 aa9.22□□□□□ -0.93
ACTN1-219ENST00000556432 NMBP08949 121 aa9.22□□□□□ -0.93
ACTN1-219ENST00000556432 CAMLGP49069 296 aa9.22□□□□□ -0.93
ACTN1-219ENST00000556432 RAB31Q13636 194 aa9.22□□□□□ -0.93
ACTN1-219ENST00000556432 OR1L4Q8NGR5 311 aa9.22□□□□□ -0.93
ACTN1-219ENST00000556432 AAMDCQ9H7C9 122 aa9.22□□□□□ -0.93
ACTN1-219ENST00000556432 DNAH8Q96JB1 4490 aa9.21□□□□□ -0.93
ACTN1-219ENST00000556432 PLA2G10O15496 165 aa9.21□□□□□ -0.94
ACTN1-219ENST00000556432 TIRAPP58753 221 aa9.21□□□□□ -0.94
ACTN1-219ENST00000556432 KRTAP10-4P60372 401 aaPredicted RBP9.21□□□□□ -0.94
ACTN1-219ENST00000556432 ZNF846Q147U1 533 aa9.21□□□□□ -0.94
ACTN1-219ENST00000556432 MIC13Q5XKP0 118 aa9.21□□□□□ -0.94
ACTN1-219ENST00000556432 C9orf47Q6ZRZ4 202 aa9.21□□□□□ -0.94
ACTN1-219ENST00000556432 EXOC3-AS1Q8N2X6 119 aa9.21□□□□□ -0.94
ACTN1-219ENST00000556432 C12orf45Q8N5I9 185 aaPredicted RBP9.21□□□□□ -0.94
ACTN1-219ENST00000556432 OR4C5Q8NGB2 326 aa9.21□□□□□ -0.94
ACTN1-219ENST00000556432 CHAC1Q9BUX1 264 aa9.21□□□□□ -0.94
ACTN1-219ENST00000556432 BATF3Q9NR55 127 aa9.21□□□□□ -0.94
ACTN1-219ENST00000556432 TRAV4A0A0B4J268 109 aa9.2□□□□□ -0.94
ACTN1-219ENST00000556432 IGHV3-16A0A0C4DH30 117 aa9.2□□□□□ -0.94
ACTN1-219ENST00000556432 NDUFB6O95139 128 aa9.2□□□□□ -0.94
ACTN1-219ENST00000556432 ARL16Q0P5N6 197 aa9.2□□□□□ -0.94
ACTN1-219ENST00000556432 TMEM183BQ1AE95 376 aa9.2□□□□□ -0.94
ACTN1-219ENST00000556432 FAM122CQ6P4D5 195 aa9.2□□□□□ -0.94
ACTN1-219ENST00000556432 NRARPQ7Z6K4 114 aa9.2□□□□□ -0.94
ACTN1-219ENST00000556432 TMEM183AQ8IXX5 376 aa9.2□□□□□ -0.94
ACTN1-219ENST00000556432 Q8TAT8 98 aa9.2□□□□□ -0.94
ACTN1-219ENST00000556432 DEDD2Q8WXF8 326 aa9.2□□□□□ -0.94
ACTN1-219ENST00000556432 RASL10AQ92737 203 aa9.2□□□□□ -0.94
ACTN1-219ENST00000556432 PFDN5Q99471 154 aa9.2□□□□□ -0.94
ACTN1-219ENST00000556432 SLC25A21Q9BQT8 299 aaPredicted RBP9.2□□□□□ -0.94
ACTN1-219ENST00000556432 SPXQ9BT56 116 aa9.2□□□□□ -0.94
ACTN1-219ENST00000556432 GGACTQ9BVM4 153 aa9.2□□□□□ -0.94
ACTN1-219ENST00000556432 BOLA1Q9Y3E2 137 aa9.2□□□□□ -0.94
ACTN1-219ENST00000556432 RBFOX3A6NFN3 312 aa9.19□□□□□ -0.94
ACTN1-219ENST00000556432 LYRM1O43325 122 aa9.19□□□□□ -0.94
ACTN1-219ENST00000556432 TSC22D2O75157 780 aa9.19□□□□□ -0.94
ACTN1-219ENST00000556432 NDUFB4O95168 129 aa9.19□□□□□ -0.94
ACTN1-219ENST00000556432 IGLV2-8P01709 118 aa9.19□□□□□ -0.94
ACTN1-219ENST00000556432 LAGE3Q14657 143 aa9.19□□□□□ -0.94
ACTN1-219ENST00000556432 TDRG1Q3Y452 100 aa9.19□□□□□ -0.94
ACTN1-219ENST00000556432 CCDC32Q9BV29 185 aa9.19□□□□□ -0.94
ACTN1-219ENST00000556432 ZNF492Q9P255 531 aa9.19□□□□□ -0.94
ACTN1-219ENST00000556432 NAGKQ9UJ70 344 aa9.19□□□□□ -0.94
ACTN1-219ENST00000556432 FAT3Q8TDW7 4589 aa9.19□□□□□ -0.94
ACTN1-219ENST00000556432 TRGV11A0A075B6L2 103 aa9.18□□□□□ -0.94
ACTN1-219ENST00000556432 NAP1L6A6NFF2 107 aa9.18□□□□□ -0.94
ACTN1-219ENST00000556432 PFN1P07737 140 aaKnown RBP9.18□□□□□ -0.94
ACTN1-219ENST00000556432 PYYP10082 97 aa9.18□□□□□ -0.94
ACTN1-219ENST00000556432 IFITM3Q01628 133 aa9.18□□□□□ -0.94
ACTN1-219ENST00000556432 PDE6HQ13956 83 aa9.18□□□□□ -0.94
ACTN1-219ENST00000556432 ACOT6Q3I5F7 207 aaPredicted RBP9.18□□□□□ -0.94
ACTN1-219ENST00000556432 CIRBP-AS1Q8TBR5 109 aa9.18□□□□□ -0.94
ACTN1-219ENST00000556432 S100ZQ8WXG8 99 aa9.18□□□□□ -0.94
ACTN1-219ENST00000556432 GPN1Q9HCN4 374 aaPredicted RBP9.18□□□□□ -0.94
ACTN1-219ENST00000556432 GSKIPQ9P0R6 139 aa9.18□□□□□ -0.94
ACTN1-219ENST00000556432 CENPXA8MT69 81 aa9.17□□□□□ -0.94
ACTN1-219ENST00000556432 ZNF138P52744 262 aa9.17□□□□□ -0.94
ACTN1-219ENST00000556432 TAS2R30P59541 319 aa9.17□□□□□ -0.94
ACTN1-219ENST00000556432 RPL37AP61513 92 aaKnown RBP9.17□□□□□ -0.94
ACTN1-219ENST00000556432 ASAH1Q13510 395 aa9.17□□□□□ -0.94
ACTN1-219ENST00000556432 IAH1Q2TAA2 248 aaPredicted RBP9.17□□□□□ -0.94
ACTN1-219ENST00000556432 FAM159AQ6UWV7 190 aa9.17□□□□□ -0.94
ACTN1-219ENST00000556432 LINC00299Q6ZSB3 139 aa9.17□□□□□ -0.94
ACTN1-219ENST00000556432 BAALCQ8WXS3 180 aa9.17□□□□□ -0.94
ACTN1-219ENST00000556432 C20orf85Q9H1P6 137 aa9.17□□□□□ -0.94
ACTN1-219ENST00000556432 TRAV8-3A0A0A6YYJ7 113 aa9.16□□□□□ -0.94
ACTN1-219ENST00000556432 C9orf170A2RU37 121 aa9.16□□□□□ -0.94
ACTN1-219ENST00000556432 GATA1P15976 413 aaPredicted RBP9.16□□□□□ -0.94
ACTN1-219ENST00000556432 LELP1Q5T871 98 aa9.16□□□□□ -0.94
ACTN1-219ENST00000556432 SLC39A9Q9NUM3 307 aa9.16□□□□□ -0.94
ACTN1-219ENST00000556432 TMEM14CQ9P0S9 112 aa9.16□□□□□ -0.94
ACTN1-219ENST00000556432 TRAV6A0A075B6T7 132 aa9.15□□□□□ -0.94
ACTN1-219ENST00000556432 L7N2F9 121 aa9.15□□□□□ -0.94
ACTN1-219ENST00000556432 M0R2P5 195 aa9.15□□□□□ -0.94
ACTN1-219ENST00000556432 UPK1BO75841 260 aa9.15□□□□□ -0.94
ACTN1-219ENST00000556432 BCAP31P51572 246 aa9.15□□□□□ -0.94
ACTN1-219ENST00000556432 UBE2MP61081 183 aaKnown RBP9.15□□□□□ -0.94
ACTN1-219ENST00000556432 VAMP2P63027 116 aa9.15□□□□□ -0.94
ACTN1-219ENST00000556432 BAXQ07812 192 aa9.15□□□□□ -0.94
ACTN1-219ENST00000556432 Q8N3U1 123 aa9.15□□□□□ -0.94
ACTN1-219ENST00000556432 PRADC1Q9BSG0 188 aa9.15□□□□□ -0.94
ACTN1-219ENST00000556432 UQCC1Q9NVA1 299 aa9.15□□□□□ -0.94
ACTN1-219ENST00000556432 UBE2L5PA0A1B0GUS4 154 aa9.14□□□□□ -0.95
ACTN1-219ENST00000556432 C7orf66A4D0T2 115 aa9.14□□□□□ -0.95
ACTN1-219ENST00000556432 FBLL1A6NHQ2 334 aaKnown RBP9.14□□□□□ -0.95
ACTN1-219ENST00000556432 CAV2P51636 162 aa9.14□□□□□ -0.95
ACTN1-219ENST00000556432 ZNF266Q14584 549 aa9.14□□□□□ -0.95
ACTN1-219ENST00000556432 ATP6V0E2Q8NHE4 81 aa9.14□□□□□ -0.95
ACTN1-219ENST00000556432 NUDT15Q9NV35 164 aa9.14□□□□□ -0.95
ACTN1-219ENST00000556432 CST7O76096 145 aa9.13□□□□□ -0.95
ACTN1-219ENST00000556432 TCRBP04435 133 aa9.13□□□□□ -0.95
ACTN1-219ENST00000556432 RPL29P47914 159 aaKnown RBP9.13□□□□□ -0.95
ACTN1-219ENST00000556432 RHOHQ15669 191 aa9.13□□□□□ -0.95
ACTN1-219ENST00000556432 TOR2AQ5JU69 321 aa9.13□□□□□ -0.95
ACTN1-219ENST00000556432 SLC25A29Q8N8R3 303 aa9.13□□□□□ -0.95
ACTN1-219ENST00000556432 Q8N976 141 aa9.13□□□□□ -0.95
ACTN1-219ENST00000556432 SEC22CQ9BRL7 303 aa9.13□□□□□ -0.95
ACTN1-219ENST00000556432 GTSF1LQ9H1H1 148 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms