RNA–Protein interactions for RNA: ENST00000555854.1

VIPAS39-207, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5

Gene VIPAS39, Length 444 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-207ENST00000555854 CRISP2P16562 243 aa6.47□□□□□ -1.37
VIPAS39-207ENST00000555854 LEPP41159 167 aa6.47□□□□□ -1.37
VIPAS39-207ENST00000555854 Q6ZTI0 123 aa6.47□□□□□ -1.37
VIPAS39-207ENST00000555854 ZFAND2AQ8N6M9 145 aa6.47□□□□□ -1.37
VIPAS39-207ENST00000555854 BLNKQ8WV28 456 aa6.47□□□□□ -1.37
VIPAS39-207ENST00000555854 PPP1R1CQ8WVI7 109 aa6.47□□□□□ -1.37
VIPAS39-207ENST00000555854 AGPAT4-IT1Q9H0P7 198 aa6.47□□□□□ -1.37
VIPAS39-207ENST00000555854 TMPRSS5Q9H3S3 457 aa6.47□□□□□ -1.37
VIPAS39-207ENST00000555854 TRAV26-1A0A087WT03 109 aa6.46□□□□□ -1.38
VIPAS39-207ENST00000555854 GAGE12BA1L429 117 aa6.46□□□□□ -1.38
VIPAS39-207ENST00000555854 C7orf71A4D174 169 aa6.46□□□□□ -1.38
VIPAS39-207ENST00000555854 BCL2L11O43521 198 aa6.46□□□□□ -1.38
VIPAS39-207ENST00000555854 GAGE7O76087 117 aa6.46□□□□□ -1.38
VIPAS39-207ENST00000555854 OR10J4P0C629 311 aa6.46□□□□□ -1.38
VIPAS39-207ENST00000555854 GAGE12FP0CL80 117 aa6.46□□□□□ -1.38
VIPAS39-207ENST00000555854 GAGE12GP0CL81 117 aa6.46□□□□□ -1.38
VIPAS39-207ENST00000555854 GAGE12IP0CL82 117 aa6.46□□□□□ -1.38
VIPAS39-207ENST00000555854 FAM3BP58499 235 aaPredicted RBP6.46□□□□□ -1.38
VIPAS39-207ENST00000555854 ICAM4Q14773 271 aa6.46□□□□□ -1.38
VIPAS39-207ENST00000555854 FAM122CQ6P4D5 195 aa6.46□□□□□ -1.38
VIPAS39-207ENST00000555854 UQCC3Q6UW78 93 aa6.46□□□□□ -1.38
VIPAS39-207ENST00000555854 ZNF575Q86XF7 245 aa6.46□□□□□ -1.38
VIPAS39-207ENST00000555854 Q8TAT8 98 aa6.46□□□□□ -1.38
VIPAS39-207ENST00000555854 ATP5SQ99766 215 aa6.46□□□□□ -1.38
VIPAS39-207ENST00000555854 VGLL1Q99990 258 aa6.46□□□□□ -1.38
VIPAS39-207ENST00000555854 PYGO2Q9BRQ0 406 aa6.46□□□□□ -1.38
VIPAS39-207ENST00000555854 MUC4Q99102 2169 aa6.45□□□□□ -1.38
VIPAS39-207ENST00000555854 A0A0J9YY99 117 aa6.45□□□□□ -1.38
VIPAS39-207ENST00000555854 NBDYA0A0U1RRE5 68 aa6.45□□□□□ -1.38
VIPAS39-207ENST00000555854 RNF222A6NCQ9 220 aa6.45□□□□□ -1.38
VIPAS39-207ENST00000555854 SLC25A5P05141 298 aaKnown RBP6.45□□□□□ -1.38
VIPAS39-207ENST00000555854 TNP2Q05952 138 aa6.45□□□□□ -1.38
VIPAS39-207ENST00000555854 DAZ2Q13117 558 aaKnown RBP6.45□□□□□ -1.38
VIPAS39-207ENST00000555854 C9orf47Q6ZRZ4 202 aa6.45□□□□□ -1.38
VIPAS39-207ENST00000555854 COMMD7Q86VX2 200 aa6.45□□□□□ -1.38
VIPAS39-207ENST00000555854 STOML3Q8TAV4 291 aa6.45□□□□□ -1.38
VIPAS39-207ENST00000555854 ARPC5LQ9BPX5 153 aa6.45□□□□□ -1.38
VIPAS39-207ENST00000555854 LINC00467Q9BRT7 94 aa6.45□□□□□ -1.38
VIPAS39-207ENST00000555854 MRPL32Q9BYC8 188 aaKnown RBP6.45□□□□□ -1.38
VIPAS39-207ENST00000555854 SLC25A31Q9H0C2 315 aa6.45□□□□□ -1.38
VIPAS39-207ENST00000555854 WFDC1Q9HC57 220 aa6.45□□□□□ -1.38
VIPAS39-207ENST00000555854 GSN-AS1Q9NRJ2 163 aa6.45□□□□□ -1.38
VIPAS39-207ENST00000555854 MBD2Q9UBB5 411 aa6.45□□□□□ -1.38
VIPAS39-207ENST00000555854 TP53TG3Q9ULZ0 132 aa6.45□□□□□ -1.38
VIPAS39-207ENST00000555854 FUT9Q9Y231 359 aa6.45□□□□□ -1.38
VIPAS39-207ENST00000555854 PRELID1Q9Y255 219 aa6.45□□□□□ -1.38
VIPAS39-207ENST00000555854 TIMM9Q9Y5J7 89 aa6.45□□□□□ -1.38
VIPAS39-207ENST00000555854 RAB19A4D1S5 217 aa6.44□□□□□ -1.38
VIPAS39-207ENST00000555854 SNURFLB1AK76 121 aa6.44□□□□□ -1.38
VIPAS39-207ENST00000555854 NMBP08949 121 aa6.44□□□□□ -1.38
VIPAS39-207ENST00000555854 NBEAP1P0C6P0 100 aa6.44□□□□□ -1.38
VIPAS39-207ENST00000555854 TPT1P13693 172 aaKnown RBP6.44□□□□□ -1.38
VIPAS39-207ENST00000555854 ANXA2RQ3ZCQ2 193 aa6.44□□□□□ -1.38
VIPAS39-207ENST00000555854 C1orf134Q5TEV5 83 aa6.44□□□□□ -1.38
VIPAS39-207ENST00000555854 RXFP4Q8TDU9 374 aa6.44□□□□□ -1.38
VIPAS39-207ENST00000555854 VSIG2Q96IQ7 327 aa6.44□□□□□ -1.38
VIPAS39-207ENST00000555854 LINC00477Q96M19 166 aa6.44□□□□□ -1.38
VIPAS39-207ENST00000555854 C18orf15Q96N68 181 aa6.44□□□□□ -1.38
VIPAS39-207ENST00000555854 ATG101Q9BSB4 218 aa6.44□□□□□ -1.38
VIPAS39-207ENST00000555854 PAXXQ9BUH6 204 aa6.44□□□□□ -1.38
VIPAS39-207ENST00000555854 SMIM3Q9BZL3 60 aa6.44□□□□□ -1.38
VIPAS39-207ENST00000555854 OR51M1Q9H341 326 aa6.44□□□□□ -1.38
VIPAS39-207ENST00000555854 KLF12Q9Y4X4 402 aa6.44□□□□□ -1.38
VIPAS39-207ENST00000555854 SPINK4O60575 86 aa6.43□□□□□ -1.38
VIPAS39-207ENST00000555854 RNASE4P34096 147 aaKnown RBP6.43□□□□□ -1.38
VIPAS39-207ENST00000555854 TCL1AP56279 114 aa6.43□□□□□ -1.38
VIPAS39-207ENST00000555854 OR5I1Q13606 314 aa6.43□□□□□ -1.38
VIPAS39-207ENST00000555854 SSX7Q7RTT5 188 aa6.43□□□□□ -1.38
VIPAS39-207ENST00000555854 GNPNAT1Q96EK6 184 aaPredicted RBP6.43□□□□□ -1.38
VIPAS39-207ENST00000555854 AQP10Q96PS8 301 aa6.43□□□□□ -1.38
VIPAS39-207ENST00000555854 KCNIP2Q9NS61 270 aa6.43□□□□□ -1.38
VIPAS39-207ENST00000555854 ZNF492Q9P255 531 aa6.43□□□□□ -1.38
VIPAS39-207ENST00000555854 A0A096LPF7 62 aa6.42□□□□□ -1.38
VIPAS39-207ENST00000555854 OR7C2O60412 319 aa6.42□□□□□ -1.38
VIPAS39-207ENST00000555854 MED14OSP0DP75 135 aa6.42□□□□□ -1.38
VIPAS39-207ENST00000555854 RPL12P30050 165 aaKnown RBP6.42□□□□□ -1.38
VIPAS39-207ENST00000555854 UBE2L3P68036 154 aaKnown RBP6.42□□□□□ -1.38
VIPAS39-207ENST00000555854 BLOC1S1P78537 153 aa6.42□□□□□ -1.38
VIPAS39-207ENST00000555854 ESRGQ1W209 222 aa6.42□□□□□ -1.38
VIPAS39-207ENST00000555854 TOR2AQ5JU69 321 aa6.42□□□□□ -1.38
VIPAS39-207ENST00000555854 FFAR4Q5NUL3 377 aa6.42□□□□□ -1.38
VIPAS39-207ENST00000555854 C6orf223Q8N319 242 aa6.42□□□□□ -1.38
VIPAS39-207ENST00000555854 SUN5Q8TC36 379 aa6.42□□□□□ -1.38
VIPAS39-207ENST00000555854 UPK3BQ9BT76 320 aa6.42□□□□□ -1.38
VIPAS39-207ENST00000555854 ZNF471Q9BX82 626 aaPredicted RBP6.42□□□□□ -1.38
VIPAS39-207ENST00000555854 Q9H3A6 140 aa6.42□□□□□ -1.38
VIPAS39-207ENST00000555854 AAMDCQ9H7C9 122 aa6.42□□□□□ -1.38
VIPAS39-207ENST00000555854 MRPL16Q9NX20 251 aaKnown RBP6.42□□□□□ -1.38
VIPAS39-207ENST00000555854 HERC1Q15751 4861 aa6.41□□□□□ -1.38
VIPAS39-207ENST00000555854 IGHV1OR15-1A0A075B7D0 117 aa6.41□□□□□ -1.38
VIPAS39-207ENST00000555854 TRGV1A0A0A0MS02 117 aa6.41□□□□□ -1.38
VIPAS39-207ENST00000555854 C17orf112F2Z3M2 114 aa6.41□□□□□ -1.38
VIPAS39-207ENST00000555854 H3BNG1 76 aa6.41□□□□□ -1.38
VIPAS39-207ENST00000555854 ZNF138P52744 262 aa6.41□□□□□ -1.38
VIPAS39-207ENST00000555854 CCL18P55774 89 aa6.41□□□□□ -1.38
VIPAS39-207ENST00000555854 RAB2AP61019 212 aa6.41□□□□□ -1.38
VIPAS39-207ENST00000555854 IBA57Q5T440 356 aaKnown RBP6.41□□□□□ -1.38
VIPAS39-207ENST00000555854 TMEM78Q5T7P6 136 aa6.41□□□□□ -1.38
VIPAS39-207ENST00000555854 MRPS16Q9Y3D3 137 aaKnown RBP6.41□□□□□ -1.38
VIPAS39-207ENST00000555854 TRBV7-9A0A0J9YWB2 115 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms