RNA–Protein interactions for RNA: ENST00000555632.5

GABRB3-209, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 2,109 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-209ENST00000555632 C11orf21Q9P2W6 132 aa13.92□□□□□ -0.18
GABRB3-209ENST00000555632 HOXD3P31249 432 aaPredicted RBP13.91□□□□□ -0.18
GABRB3-209ENST00000555632 Q6ZSV7 163 aa13.91□□□□□ -0.18
GABRB3-209ENST00000555632 SMR3AQ99954 134 aa13.91□□□□□ -0.18
GABRB3-209ENST00000555632 ALKBH7Q9BT30 221 aaPredicted RBP13.91□□□□□ -0.18
GABRB3-209ENST00000555632 FABP5P3A8MUU1 101 aa13.91□□□□□ -0.18
GABRB3-209ENST00000555632 ORM1P02763 201 aa13.91□□□□□ -0.18
GABRB3-209ENST00000555632 CD33P20138 364 aa13.91□□□□□ -0.18
GABRB3-209ENST00000555632 BMI1P35226 326 aa13.91□□□□□ -0.18
GABRB3-209ENST00000555632 OR10J3Q5JRS4 329 aa13.91□□□□□ -0.18
GABRB3-209ENST00000555632 PRR9Q5T870 116 aa13.91□□□□□ -0.18
GABRB3-209ENST00000555632 UFC1Q9Y3C8 167 aa13.91□□□□□ -0.18
GABRB3-209ENST00000555632 WFDC3Q8IUB2 231 aa13.9□□□□□ -0.18
GABRB3-209ENST00000555632 J3KRW8 73 aa13.9□□□□□ -0.18
GABRB3-209ENST00000555632 ESDP10768 282 aa13.9□□□□□ -0.18
GABRB3-209ENST00000555632 TMEM86BQ8N661 226 aa13.9□□□□□ -0.18
GABRB3-209ENST00000555632 DCANP1Q8TF63 244 aa13.9□□□□□ -0.18
GABRB3-209ENST00000555632 DUX3Q96PT4 197 aa13.9□□□□□ -0.18
GABRB3-209ENST00000555632 SORL1Q92673 2214 aa13.89□□□□□ -0.19
GABRB3-209ENST00000555632 CLEC5AQ9NY25 188 aa13.89□□□□□ -0.19
GABRB3-209ENST00000555632 IGKV3D-20A0A0C4DH25 116 aa13.88□□□□□ -0.19
GABRB3-209ENST00000555632 TFPI2P48307 235 aa13.88□□□□□ -0.19
GABRB3-209ENST00000555632 SLURP1P55000 103 aa13.88□□□□□ -0.19
GABRB3-209ENST00000555632 JOSD1Q15040 202 aaPredicted RBP13.87□□□□□ -0.19
GABRB3-209ENST00000555632 TEX29Q8N6K0 151 aa13.87□□□□□ -0.19
GABRB3-209ENST00000555632 IGLC6P0CF74 106 aa13.87□□□□□ -0.19
GABRB3-209ENST00000555632 HIST1H1AQ02539 215 aaPredicted RBP13.87□□□□□ -0.19
GABRB3-209ENST00000555632 RIGQ13278 110 aa13.87□□□□□ -0.19
GABRB3-209ENST00000555632 KIR3DS1Q14943 382 aa13.87□□□□□ -0.19
GABRB3-209ENST00000555632 Q6AWC8 147 aa13.87□□□□□ -0.19
GABRB3-209ENST00000555632 PPP1R14DQ9NXH3 145 aa13.87□□□□□ -0.19
GABRB3-209ENST00000555632 LOC102724200A0A096LPH7 203 aaPredicted RBP13.86□□□□□ -0.19
GABRB3-209ENST00000555632 M0QZ24 198 aa13.86□□□□□ -0.19
GABRB3-209ENST00000555632 LINC01559Q495D7 138 aa13.86□□□□□ -0.19
GABRB3-209ENST00000555632 KHDC1LQ5JSQ8 128 aa13.86□□□□□ -0.19
GABRB3-209ENST00000555632 ADAMTSL5Q6ZMM2 481 aa13.86□□□□□ -0.19
GABRB3-209ENST00000555632 REC114Q7Z4M0 266 aa13.86□□□□□ -0.19
GABRB3-209ENST00000555632 FER1L6-AS1Q8NA97 138 aa13.86□□□□□ -0.19
GABRB3-209ENST00000555632 OR10J6PQ8NGY7 276 aa13.86□□□□□ -0.19
GABRB3-209ENST00000555632 MS4A6AQ9H2W1 248 aa13.86□□□□□ -0.19
GABRB3-209ENST00000555632 GSN-AS1Q9NRJ2 163 aa13.86□□□□□ -0.19
GABRB3-209ENST00000555632 RNF114Q9Y508 228 aa13.86□□□□□ -0.19
GABRB3-209ENST00000555632 NIPBLQ6KC79 2804 aaeCLIP13.86□□□□□ -0.19
GABRB3-209ENST00000555632 Q6ZWC4 215 aa13.85□□□□□ -0.19
GABRB3-209ENST00000555632 FAM19A2Q8N3H0 131 aa13.85□□□□□ -0.19
GABRB3-209ENST00000555632 ZFAND2AQ8N6M9 145 aa13.85□□□□□ -0.19
GABRB3-209ENST00000555632 OR8A1Q8NGG7 326 aa13.85□□□□□ -0.19
GABRB3-209ENST00000555632 C2orf70A6NJV1 201 aa13.85□□□□□ -0.19
GABRB3-209ENST00000555632 LGALS9O00182 355 aa13.85□□□□□ -0.19
GABRB3-209ENST00000555632 OVOL1O14753 267 aa13.85□□□□□ -0.19
GABRB3-209ENST00000555632 KLF5Q13887 457 aaPredicted RBP13.85□□□□□ -0.19
GABRB3-209ENST00000555632 C11orf44Q8N8P7 122 aa13.85□□□□□ -0.19
GABRB3-209ENST00000555632 OR11H1Q8NG94 326 aa13.85□□□□□ -0.19
GABRB3-209ENST00000555632 URB1-AS1Q96HZ7 61 aa13.85□□□□□ -0.19
GABRB3-209ENST00000555632 KCNS1Q96KK3 526 aa13.85□□□□□ -0.19
GABRB3-209ENST00000555632 SAMD10Q9BYL1 202 aa13.85□□□□□ -0.19
GABRB3-209ENST00000555632 MSRB1Q9NZV6 116 aa13.85□□□□□ -0.19
GABRB3-209ENST00000555632 GPX1P07203 203 aa13.84□□□□□ -0.19
GABRB3-209ENST00000555632 PMCHP20382 165 aa13.84□□□□□ -0.19
GABRB3-209ENST00000555632 CTRLP40313 264 aa13.84□□□□□ -0.19
GABRB3-209ENST00000555632 LINC00477Q96M19 166 aa13.84□□□□□ -0.19
GABRB3-209ENST00000555632 HIVEP2P31629 2446 aa13.84□□□□□ -0.19
GABRB3-209ENST00000555632 NTF3P20783 257 aa13.84□□□□□ -0.19
GABRB3-209ENST00000555632 SRSF2Q01130 221 aaKnown RBP13.84□□□□□ -0.19
GABRB3-209ENST00000555632 ZNF688P0C7X2 276 aa13.83□□□□□ -0.2
GABRB3-209ENST00000555632 RPS20P60866 119 aaKnown RBP13.83□□□□□ -0.2
GABRB3-209ENST00000555632 PAFAH1B2P68402 229 aa13.83□□□□□ -0.2
GABRB3-209ENST00000555632 GATD1Q8NB37 220 aa13.83□□□□□ -0.2
GABRB3-209ENST00000555632 WFDC12Q8WWY7 111 aa13.83□□□□□ -0.2
GABRB3-209ENST00000555632 BORCS7Q96B45 105 aa13.83□□□□□ -0.2
GABRB3-209ENST00000555632 AGRNO00468 2067 aa13.83□□□□□ -0.2
GABRB3-209ENST00000555632 AMTP48728 403 aa13.82□□□□□ -0.2
GABRB3-209ENST00000555632 TWIST1Q15672 202 aa13.82□□□□□ -0.2
GABRB3-209ENST00000555632 ZNF493Q6ZR52 646 aa13.82□□□□□ -0.2
GABRB3-209ENST00000555632 AMN1Q8IY45 258 aa13.82□□□□□ -0.2
GABRB3-209ENST00000555632 FAM19A4Q96LR4 140 aa13.82□□□□□ -0.2
GABRB3-209ENST00000555632 ZNF324O75467 553 aaPredicted RBP13.81□□□□□ -0.2
GABRB3-209ENST00000555632 KLHL30-AS1Q8NEE0 82 aa13.81□□□□□ -0.2
GABRB3-209ENST00000555632 C4orf3Q8WVX3 66 aa13.81□□□□□ -0.2
GABRB3-209ENST00000555632 LENEPQ9Y5L5 61 aa13.81□□□□□ -0.2
GABRB3-209ENST00000555632 WNK1Q9H4A3 2382 aa13.81□□□□□ -0.2
GABRB3-209ENST00000555632 A0A1B0GW15 77 aa13.81□□□□□ -0.2
GABRB3-209ENST00000555632 LINC01619G3V211 115 aa13.81□□□□□ -0.2
GABRB3-209ENST00000555632 PSMG4Q5JS54 123 aa13.81□□□□□ -0.2
GABRB3-209ENST00000555632 NIT1Q86X76 327 aa13.81□□□□□ -0.2
GABRB3-209ENST00000555632 RNASEKQ6P5S7 137 aaKnown RBP13.8□□□□□ -0.2
GABRB3-209ENST00000555632 SETXQ7Z333 2677 aaKnown RBP13.8□□□□□ -0.2
GABRB3-209ENST00000555632 DLX4Q92988 240 aaPredicted RBP13.79□□□□□ -0.2
GABRB3-209ENST00000555632 NAGKQ9UJ70 344 aa13.79□□□□□ -0.2
GABRB3-209ENST00000555632 K7EQG2 157 aa13.79□□□□□ -0.2
GABRB3-209ENST00000555632 RNASE4P34096 147 aaKnown RBP13.79□□□□□ -0.2
GABRB3-209ENST00000555632 ID1P41134 155 aa13.79□□□□□ -0.2
GABRB3-209ENST00000555632 PMCHL1Q16048 86 aa13.79□□□□□ -0.2
GABRB3-209ENST00000555632 OR1N2Q8NGR9 330 aa13.79□□□□□ -0.2
GABRB3-209ENST00000555632 CNFNQ9BYD5 112 aa13.79□□□□□ -0.2
GABRB3-209ENST00000555632 FAM104BQ5XKR9 115 aa13.78□□□□□ -0.2
GABRB3-209ENST00000555632 OR10AG1Q8NH19 301 aa13.78□□□□□ -0.2
GABRB3-209ENST00000555632 A0A1W2PRX2 142 aa13.78□□□□□ -0.2
GABRB3-209ENST00000555632 SPRY2O43597 315 aa13.78□□□□□ -0.2
GABRB3-209ENST00000555632 SCGB1D1O95968 90 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms