RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 HIGD1BQ9P298 99 aa12.45□□□□□ -0.42
TUBB3-209ENST00000555609 HLA-DRB4X5D2U9 266 aa12.45□□□□□ -0.42
TUBB3-209ENST00000555609 FAM223BA6NKX1 122 aa12.44□□□□□ -0.42
TUBB3-209ENST00000555609 SAA4P35542 130 aa12.44□□□□□ -0.42
TUBB3-209ENST00000555609 ATP5G2Q06055 141 aa12.44□□□□□ -0.42
TUBB3-209ENST00000555609 CLEC19AQ6UXS0 136 aa12.44□□□□□ -0.42
TUBB3-209ENST00000555609 GTF2H5Q6ZYL4 71 aa12.44□□□□□ -0.42
TUBB3-209ENST00000555609 FAM223AQ8IWN6 122 aa12.44□□□□□ -0.42
TUBB3-209ENST00000555609 MSRB1Q9NZV6 116 aa12.44□□□□□ -0.42
TUBB3-209ENST00000555609 TRAV8-2A0A0B4J237 113 aa12.44□□□□□ -0.42
TUBB3-209ENST00000555609 IGKV3D-20A0A0C4DH25 116 aa12.44□□□□□ -0.42
TUBB3-209ENST00000555609 EVI2AP22794 236 aa12.44□□□□□ -0.42
TUBB3-209ENST00000555609 KIR3DS1Q14943 382 aa12.44□□□□□ -0.42
TUBB3-209ENST00000555609 ADAMTSL5Q6ZMM2 481 aa12.44□□□□□ -0.42
TUBB3-209ENST00000555609 NPFFO15130 113 aa12.43□□□□□ -0.42
TUBB3-209ENST00000555609 SNAI2O43623 268 aa12.43□□□□□ -0.42
TUBB3-209ENST00000555609 ODF1Q14990 250 aa12.43□□□□□ -0.42
TUBB3-209ENST00000555609 OR2K2Q8NGT1 345 aa12.43□□□□□ -0.42
TUBB3-209ENST00000555609 NBASA2RRP1 2371 aa12.43□□□□□ -0.42
TUBB3-209ENST00000555609 ANKHD1Q8IWZ3 2542 aaKnown RBP12.43□□□□□ -0.42
TUBB3-209ENST00000555609 IGLV2-18A0A075B6J9 118 aa12.42□□□□□ -0.42
TUBB3-209ENST00000555609 TRAV8-6A0A0B4J262 113 aa12.42□□□□□ -0.42
TUBB3-209ENST00000555609 LMO4P61968 165 aa12.42□□□□□ -0.42
TUBB3-209ENST00000555609 C8orf86Q6ZUL3 223 aa12.42□□□□□ -0.42
TUBB3-209ENST00000555609 C9orf139Q6ZV77 190 aa12.42□□□□□ -0.42
TUBB3-209ENST00000555609 C5orf56Q8N8D9 126 aa12.42□□□□□ -0.42
TUBB3-209ENST00000555609 CST9LQ9H4G1 147 aa12.42□□□□□ -0.42
TUBB3-209ENST00000555609 RELNP78509 3460 aa12.42□□□□□ -0.42
TUBB3-209ENST00000555609 IGHV3-35A0A0C4DH35 117 aa12.42□□□□□ -0.42
TUBB3-209ENST00000555609 BRI3O95415 125 aa12.42□□□□□ -0.42
TUBB3-209ENST00000555609 RNF182Q8N6D2 247 aa12.42□□□□□ -0.42
TUBB3-209ENST00000555609 DKK2Q9UBU2 259 aa12.42□□□□□ -0.42
TUBB3-209ENST00000555609 ZNF462Q96JM2 2506 aa12.41□□□□□ -0.42
TUBB3-209ENST00000555609 GAGE10A6NGK3 116 aa12.41□□□□□ -0.42
TUBB3-209ENST00000555609 IGKCP01834 107 aa12.41□□□□□ -0.42
TUBB3-209ENST00000555609 FXYD7P58549 80 aa12.41□□□□□ -0.42
TUBB3-209ENST00000555609 MRAP2Q96G30 205 aa12.41□□□□□ -0.42
TUBB3-209ENST00000555609 MOB4Q9Y3A3 225 aa12.41□□□□□ -0.42
TUBB3-209ENST00000555609 IGHV3OR16-8A0A075B7F1 116 aa12.4□□□□□ -0.42
TUBB3-209ENST00000555609 IGHV7-4-1A0A0J9YVY3 117 aa12.4□□□□□ -0.42
TUBB3-209ENST00000555609 PRSS1P07477 247 aa12.4□□□□□ -0.42
TUBB3-209ENST00000555609 C19orf54Q5BKX5 351 aa12.4□□□□□ -0.42
TUBB3-209ENST00000555609 LINC00477Q96M19 166 aa12.4□□□□□ -0.42
TUBB3-209ENST00000555609 SPOCK3Q9BQ16 436 aa12.4□□□□□ -0.42
TUBB3-209ENST00000555609 ARHGAP32A7KAX9 2087 aa12.4□□□□□ -0.42
TUBB3-209ENST00000555609 DPM2O94777 84 aa12.4□□□□□ -0.42
TUBB3-209ENST00000555609 NMUP48645 174 aa12.4□□□□□ -0.42
TUBB3-209ENST00000555609 FOXE3Q13461 319 aa12.4□□□□□ -0.42
TUBB3-209ENST00000555609 LAGE3Q14657 143 aa12.4□□□□□ -0.42
TUBB3-209ENST00000555609 OCIAD2Q56VL3 154 aa12.4□□□□□ -0.42
TUBB3-209ENST00000555609 MYOZ3Q8TDC0 251 aa12.4□□□□□ -0.42
TUBB3-209ENST00000555609 TMEM158Q8WZ71 300 aa12.4□□□□□ -0.42
TUBB3-209ENST00000555609 HHLA3Q9XRX5 114 aa12.4□□□□□ -0.42
TUBB3-209ENST00000555609 GAGE12BA1L429 117 aa12.39□□□□□ -0.43
TUBB3-209ENST00000555609 G3V318 75 aa12.39□□□□□ -0.43
TUBB3-209ENST00000555609 SRSF1Q07955 248 aaKnown RBP eCLIP12.39□□□□□ -0.43
TUBB3-209ENST00000555609 UFSP1Q6NVU6 142 aa12.39□□□□□ -0.43
TUBB3-209ENST00000555609 NRACQ8N912 160 aa12.39□□□□□ -0.43
TUBB3-209ENST00000555609 GLMPQ8WWB7 406 aa12.39□□□□□ -0.43
TUBB3-209ENST00000555609 C11orf21Q9P2W6 132 aa12.39□□□□□ -0.43
TUBB3-209ENST00000555609 TRAV41A0A0B4J266 112 aa12.38□□□□□ -0.43
TUBB3-209ENST00000555609 H3BUA1 57 aa12.38□□□□□ -0.43
TUBB3-209ENST00000555609 K7EMI3 77 aa12.38□□□□□ -0.43
TUBB3-209ENST00000555609 OVOL1O14753 267 aa12.38□□□□□ -0.43
TUBB3-209ENST00000555609 ITLN2Q8WWU7 325 aaPredicted RBP12.38□□□□□ -0.43
TUBB3-209ENST00000555609 C16orf92Q96LL3 132 aa12.38□□□□□ -0.43
TUBB3-209ENST00000555609 C18orf15Q96N68 181 aa12.38□□□□□ -0.43
TUBB3-209ENST00000555609 UBTD1Q9HAC8 227 aa12.38□□□□□ -0.43
TUBB3-209ENST00000555609 CHTOPQ9Y3Y2 248 aaKnown RBP12.38□□□□□ -0.43
TUBB3-209ENST00000555609 A0A1W2PPR1 153 aa12.38□□□□□ -0.43
TUBB3-209ENST00000555609 K7ERU9 68 aa12.38□□□□□ -0.43
TUBB3-209ENST00000555609 SMIM17P0DL12 118 aa12.38□□□□□ -0.43
TUBB3-209ENST00000555609 ERASQ7Z444 233 aa12.38□□□□□ -0.43
TUBB3-209ENST00000555609 PCP2Q8IVA1 136 aa12.38□□□□□ -0.43
TUBB3-209ENST00000555609 K7EP34 96 aa12.37□□□□□ -0.43
TUBB3-209ENST00000555609 MED14OSP0DP75 135 aa12.37□□□□□ -0.43
TUBB3-209ENST00000555609 PPIFP30405 207 aaKnown RBP12.37□□□□□ -0.43
TUBB3-209ENST00000555609 UQCRFS1P47985 274 aa12.37□□□□□ -0.43
TUBB3-209ENST00000555609 SPANXN1Q5VSR9 72 aa12.37□□□□□ -0.43
TUBB3-209ENST00000555609 OR5A1Q8NGJ0 315 aa12.37□□□□□ -0.43
TUBB3-209ENST00000555609 IGHV3-66A0A0C4DH42 116 aa12.36□□□□□ -0.43
TUBB3-209ENST00000555609 A0A0G2JLM5 398 aa12.36□□□□□ -0.43
TUBB3-209ENST00000555609 TRBV7-9A0A0J9YWB2 115 aa12.36□□□□□ -0.43
TUBB3-209ENST00000555609 NDUFA4O00483 81 aa12.36□□□□□ -0.43
TUBB3-209ENST00000555609 GAS8-AS1O95177 125 aa12.36□□□□□ -0.43
TUBB3-209ENST00000555609 FOXC2Q99958 501 aa12.36□□□□□ -0.43
TUBB3-209ENST00000555609 BPESC1Q9GZL8 116 aa12.36□□□□□ -0.43
TUBB3-209ENST00000555609 LINC01548A6NM66 108 aa12.36□□□□□ -0.43
TUBB3-209ENST00000555609 SMIM13P0DJ93 91 aa12.36□□□□□ -0.43
TUBB3-209ENST00000555609 ZNF843Q8N446 348 aa12.36□□□□□ -0.43
TUBB3-209ENST00000555609 USMG5Q96IX5 58 aa12.36□□□□□ -0.43
TUBB3-209ENST00000555609 MEGF9Q9H1U4 602 aa12.36□□□□□ -0.43
TUBB3-209ENST00000555609 TRAV12-1A0A0B4J245 112 aa12.35□□□□□ -0.43
TUBB3-209ENST00000555609 TRAV21A0A0B4J279 112 aa12.35□□□□□ -0.43
TUBB3-209ENST00000555609 TRGV3P03979 118 aa12.35□□□□□ -0.43
TUBB3-209ENST00000555609 GATA1P15976 413 aaPredicted RBP12.35□□□□□ -0.43
TUBB3-209ENST00000555609 SLC25A16P16260 332 aa12.35□□□□□ -0.43
TUBB3-209ENST00000555609 TAL2Q16559 108 aa12.35□□□□□ -0.43
TUBB3-209ENST00000555609 WFDC3Q8IUB2 231 aa12.35□□□□□ -0.43
TUBB3-209ENST00000555609 C20orf78Q9BR46 151 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms