RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 CPDO75976 1380 aa0.19□□□□□ -2.38
SCFD1-216ENST00000555550 ANK2Q01484 3957 aa0.19□□□□□ -2.38
SCFD1-216ENST00000555550 USH2AO75445 5202 aa0.19□□□□□ -2.38
SCFD1-216ENST00000555550 PTPRMP28827 1452 aa0.19□□□□□ -2.38
SCFD1-216ENST00000555550 TRAV36DV7A0A075B6V5 113 aa0.19□□□□□ -2.38
SCFD1-216ENST00000555550 TRAV13-1A0A0B4J241 112 aa0.19□□□□□ -2.38
SCFD1-216ENST00000555550 GNG14A0A1W2PPG7 69 aa0.19□□□□□ -2.38
SCFD1-216ENST00000555550 OR2T8A6NH00 312 aa0.19□□□□□ -2.38
SCFD1-216ENST00000555550 E7EQ34 232 aa0.19□□□□□ -2.38
SCFD1-216ENST00000555550 JMJD7-PLA2G4BH0Y9G9 81 aa0.19□□□□□ -2.38
SCFD1-216ENST00000555550 PITX3O75364 302 aa0.19□□□□□ -2.38
SCFD1-216ENST00000555550 IFNA4P05014 189 aa0.19□□□□□ -2.38
SCFD1-216ENST00000555550 SLC25A4P12235 298 aa0.19□□□□□ -2.38
SCFD1-216ENST00000555550 CRYGSP22914 178 aa0.19□□□□□ -2.38
SCFD1-216ENST00000555550 SDC2P34741 201 aa0.19□□□□□ -2.38
SCFD1-216ENST00000555550 MAXP61244 160 aa0.19□□□□□ -2.38
SCFD1-216ENST00000555550 MRPS36P82909 103 aaKnown RBP0.19□□□□□ -2.38
SCFD1-216ENST00000555550 QRFPP83859 136 aa0.19□□□□□ -2.38
SCFD1-216ENST00000555550 DR1Q01658 176 aa0.19□□□□□ -2.38
SCFD1-216ENST00000555550 DIAPH2-AS1Q14236 149 aa0.19□□□□□ -2.38
SCFD1-216ENST00000555550 OR8B8Q15620 311 aa0.19□□□□□ -2.38
SCFD1-216ENST00000555550 MORN2Q502X0 79 aa0.19□□□□□ -2.38
SCFD1-216ENST00000555550 LINC00305Q7Z4B0 112 aa0.19□□□□□ -2.38
SCFD1-216ENST00000555550 LRRC18Q8N456 261 aa0.19□□□□□ -2.38
SCFD1-216ENST00000555550 TEX29Q8N6K0 151 aa0.19□□□□□ -2.38
SCFD1-216ENST00000555550 TMEM229BQ8NBD8 167 aa0.19□□□□□ -2.38
SCFD1-216ENST00000555550 OR5A2Q8NGI9 324 aa0.19□□□□□ -2.38
SCFD1-216ENST00000555550 OR51A4Q8NGJ6 313 aa0.19□□□□□ -2.38
SCFD1-216ENST00000555550 OR10AC1Q8NH08 325 aa0.19□□□□□ -2.38
SCFD1-216ENST00000555550 DYDC1Q8WWB3 177 aa0.19□□□□□ -2.38
SCFD1-216ENST00000555550 PRELID3AQ96N28 172 aa0.19□□□□□ -2.38
SCFD1-216ENST00000555550 MCEEQ96PE7 176 aa0.19□□□□□ -2.38
SCFD1-216ENST00000555550 OR4C12Q96R67 309 aa0.19□□□□□ -2.38
SCFD1-216ENST00000555550 LPAR5Q9H1C0 372 aa0.19□□□□□ -2.38
SCFD1-216ENST00000555550 C10orf95Q9H7T3 257 aa0.19□□□□□ -2.38
SCFD1-216ENST00000555550 DNAJC15Q9Y5T4 150 aa0.19□□□□□ -2.38
SCFD1-216ENST00000555550 MPC1Q9Y5U8 109 aa0.19□□□□□ -2.38
SCFD1-216ENST00000555550 ACANP16112 2415 aa0.19□□□□□ -2.38
SCFD1-216ENST00000555550 CHD3Q12873 2000 aaKnown RBP0.19□□□□□ -2.38
SCFD1-216ENST00000555550 UBR5O95071 2799 aaPredicted RBP0.19□□□□□ -2.38
SCFD1-216ENST00000555550 NBEAL2Q6ZNJ1 2754 aa0.19□□□□□ -2.38
SCFD1-216ENST00000555550 LRP5O75197 1615 aa0.19□□□□□ -2.38
SCFD1-216ENST00000555550 POLQO75417 2590 aa0.19□□□□□ -2.38
SCFD1-216ENST00000555550 MYO18BQ8IUG5 2567 aa0.19□□□□□ -2.38
SCFD1-216ENST00000555550 OVOS2A0A0G2JMS6 1433 aa0.19□□□□□ -2.38
SCFD1-216ENST00000555550 ADGRB1O14514 1584 aa0.19□□□□□ -2.38
SCFD1-216ENST00000555550 ZGRF1Q86YA3 2104 aa0.19□□□□□ -2.38
SCFD1-216ENST00000555550 PLXNA2O75051 1894 aa0.18□□□□□ -2.38
SCFD1-216ENST00000555550 ANK1P16157 1881 aa0.18□□□□□ -2.38
SCFD1-216ENST00000555550 DSPPQ9NZW4 1301 aa0.18□□□□□ -2.38
SCFD1-216ENST00000555550 F8W1H4 67 aa0.18□□□□□ -2.38
SCFD1-216ENST00000555550 H3BMG7 143 aa0.18□□□□□ -2.38
SCFD1-216ENST00000555550 TNFSF15O95150 251 aa0.18□□□□□ -2.38
SCFD1-216ENST00000555550 IGF2P01344 180 aa0.18□□□□□ -2.38
SCFD1-216ENST00000555550 SAA1P0DJI8 122 aaPredicted RBP0.18□□□□□ -2.38
SCFD1-216ENST00000555550 FABP2P12104 132 aa0.18□□□□□ -2.38
SCFD1-216ENST00000555550 SDC4P31431 198 aa0.18□□□□□ -2.38
SCFD1-216ENST00000555550 ALX1Q15699 326 aa0.18□□□□□ -2.38
SCFD1-216ENST00000555550 VMA21Q3ZAQ7 101 aa0.18□□□□□ -2.38
SCFD1-216ENST00000555550 LINC00575Q6W349 94 aa0.18□□□□□ -2.38
SCFD1-216ENST00000555550 OR5H6Q8NGV6 325 aa0.18□□□□□ -2.38
SCFD1-216ENST00000555550 ZNF714Q96N38 554 aa0.18□□□□□ -2.38
SCFD1-216ENST00000555550 CCDC32Q9BV29 185 aa0.18□□□□□ -2.38
SCFD1-216ENST00000555550 LAMTOR2Q9Y2Q5 125 aa0.18□□□□□ -2.38
SCFD1-216ENST00000555550 V9GYQ6 96 aa0.18□□□□□ -2.38
SCFD1-216ENST00000555550 USP9XQ93008 2570 aaPredicted RBP0.18□□□□□ -2.38
SCFD1-216ENST00000555550 CEP152O94986 1710 aa0.18□□□□□ -2.38
SCFD1-216ENST00000555550 CASZ1Q86V15 1759 aa0.17□□□□□ -2.38
SCFD1-216ENST00000555550 CXorf51AA0A1B0GTR3 108 aa0.17□□□□□ -2.38
SCFD1-216ENST00000555550 NUPR2A6NF83 97 aa0.17□□□□□ -2.38
SCFD1-216ENST00000555550 M0QZK8 103 aa0.17□□□□□ -2.38
SCFD1-216ENST00000555550 ACACBO00763 2458 aa0.17□□□□□ -2.38
SCFD1-216ENST00000555550 ARPC5O15511 151 aa0.17□□□□□ -2.38
SCFD1-216ENST00000555550 LYRM1O43325 122 aa0.17□□□□□ -2.38
SCFD1-216ENST00000555550 FAM107AO95990 144 aa0.17□□□□□ -2.38
SCFD1-216ENST00000555550 PPYP01298 95 aa0.17□□□□□ -2.38
SCFD1-216ENST00000555550 TRACP01848 142 aa0.17□□□□□ -2.38
SCFD1-216ENST00000555550 HBDP02042 147 aa0.17□□□□□ -2.38
SCFD1-216ENST00000555550 PRH1P02810 166 aa0.17□□□□□ -2.38
SCFD1-216ENST00000555550 CD3DP04234 171 aa0.17□□□□□ -2.38
SCFD1-216ENST00000555550 FXYD4P59646 89 aa0.17□□□□□ -2.38
SCFD1-216ENST00000555550 BLCAPP62952 87 aa0.17□□□□□ -2.38
SCFD1-216ENST00000555550 CIRBPQ14011 172 aaKnown RBP0.17□□□□□ -2.38
SCFD1-216ENST00000555550 CCSMST1Q4G0I0 132 aa0.17□□□□□ -2.38
SCFD1-216ENST00000555550 FAM74A1Q5RGS3 127 aa0.17□□□□□ -2.38
SCFD1-216ENST00000555550 SAMD13Q5VXD3 122 aa0.17□□□□□ -2.38
SCFD1-216ENST00000555550 C10orf99Q6UWK7 81 aa0.17□□□□□ -2.38
SCFD1-216ENST00000555550 TMEM91Q6ZNR0 172 aa0.17□□□□□ -2.38
SCFD1-216ENST00000555550 SMIM15Q7Z3B0 74 aa0.17□□□□□ -2.38
SCFD1-216ENST00000555550 AKAP14Q86UN6 197 aa0.17□□□□□ -2.38
SCFD1-216ENST00000555550 ATOH7Q8N100 152 aa0.17□□□□□ -2.38
SCFD1-216ENST00000555550 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.17□□□□□ -2.38
SCFD1-216ENST00000555550 ZNF431Q8TF32 576 aaPredicted RBP0.17□□□□□ -2.38
SCFD1-216ENST00000555550 PRG4Q92954 1404 aaPredicted RBP0.17□□□□□ -2.38
SCFD1-216ENST00000555550 BORCS5Q969J3 196 aa0.17□□□□□ -2.38
SCFD1-216ENST00000555550 TCEAL2Q9H3H9 227 aaPredicted RBP0.17□□□□□ -2.38
SCFD1-216ENST00000555550 MRPL40Q9NQ50 206 aaKnown RBP0.17□□□□□ -2.38
SCFD1-216ENST00000555550 TMEM14CQ9P0S9 112 aa0.17□□□□□ -2.38
SCFD1-216ENST00000555550 EP300Q09472 2414 aaPredicted RBP0.17□□□□□ -2.38
SCFD1-216ENST00000555550 SNRNP200O75643 2136 aaKnown RBP0.17□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms