RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 PNRC1Q12796 327 aaPredicted RBP7.59□□□□□ -1.2
NEK9-205ENST00000555405 IGF2BP2-AS1Q96M15 143 aa7.59□□□□□ -1.2
NEK9-205ENST00000555405 TUBA4BQ9H853 241 aa7.59□□□□□ -1.2
NEK9-205ENST00000555405 SAPCD1Q5SSQ6 148 aa7.58□□□□□ -1.2
NEK9-205ENST00000555405 ZNF256Q9Y2P7 627 aaPredicted RBP7.58□□□□□ -1.2
NEK9-205ENST00000555405 A0A0J9YX75 114 aa7.58□□□□□ -1.2
NEK9-205ENST00000555405 SH2D1AO60880 128 aa7.58□□□□□ -1.2
NEK9-205ENST00000555405 TMEM183AQ8IXX5 376 aa7.58□□□□□ -1.2
NEK9-205ENST00000555405 LINC00477Q96M19 166 aa7.58□□□□□ -1.2
NEK9-205ENST00000555405 ZNF492Q9P255 531 aa7.58□□□□□ -1.2
NEK9-205ENST00000555405 ZFP30Q9Y2G7 519 aa7.58□□□□□ -1.2
NEK9-205ENST00000555405 C9JCJ5 164 aa7.57□□□□□ -1.2
NEK9-205ENST00000555405 LTAP01374 205 aa7.57□□□□□ -1.2
NEK9-205ENST00000555405 PRR9Q5T870 116 aa7.57□□□□□ -1.2
NEK9-205ENST00000555405 MRPL54Q6P161 138 aaKnown RBP7.57□□□□□ -1.2
NEK9-205ENST00000555405 KLF12Q9Y4X4 402 aa7.57□□□□□ -1.2
NEK9-205ENST00000555405 G3V4G9 280 aa7.57□□□□□ -1.2
NEK9-205ENST00000555405 S100A4P26447 101 aaKnown RBP7.57□□□□□ -1.2
NEK9-205ENST00000555405 C10orf91Q5T1B1 145 aa7.57□□□□□ -1.2
NEK9-205ENST00000555405 PGLYRP4Q96LB8 373 aa7.57□□□□□ -1.2
NEK9-205ENST00000555405 TMEM189A5PLL7 270 aa7.57□□□□□ -1.2
NEK9-205ENST00000555405 S100A9P06702 114 aaKnown RBP7.57□□□□□ -1.2
NEK9-205ENST00000555405 S100PP25815 95 aa7.57□□□□□ -1.2
NEK9-205ENST00000555405 CRIP1P50238 77 aa7.57□□□□□ -1.2
NEK9-205ENST00000555405 CAMPP49913 170 aa7.56□□□□□ -1.2
NEK9-205ENST00000555405 SMCO4Q9NRQ5 59 aa7.56□□□□□ -1.2
NEK9-205ENST00000555405 FABP5P3A8MUU1 101 aa7.56□□□□□ -1.2
NEK9-205ENST00000555405 RHEBQ15382 184 aa7.56□□□□□ -1.2
NEK9-205ENST00000555405 FAM162BQ5T6X4 162 aa7.56□□□□□ -1.2
NEK9-205ENST00000555405 TCEAL7Q9BRU2 100 aa7.56□□□□□ -1.2
NEK9-205ENST00000555405 TGIF2-C20orf24A0A0A6YYL0 155 aa7.56□□□□□ -1.2
NEK9-205ENST00000555405 TRAV25A0A0B4J276 109 aa7.56□□□□□ -1.2
NEK9-205ENST00000555405 SERTM2A0A1B0GWG4 89 aa7.56□□□□□ -1.2
NEK9-205ENST00000555405 H3BMM0 161 aa7.56□□□□□ -1.2
NEK9-205ENST00000555405 DUSP14O95147 198 aaKnown RBP7.56□□□□□ -1.2
NEK9-205ENST00000555405 SAMD13Q5VXD3 122 aa7.56□□□□□ -1.2
NEK9-205ENST00000555405 FOXI2Q6ZQN5 318 aa7.56□□□□□ -1.2
NEK9-205ENST00000555405 DEFB121Q5J5C9 76 aa7.55□□□□□ -1.2
NEK9-205ENST00000555405 C9orf47Q6ZRZ4 202 aa7.55□□□□□ -1.2
NEK9-205ENST00000555405 MCRIP2Q9BUT9 160 aaKnown RBP7.55□□□□□ -1.2
NEK9-205ENST00000555405 SAV1Q9H4B6 383 aaPredicted RBP7.55□□□□□ -1.2
NEK9-205ENST00000555405 B4DEV8 164 aa7.55□□□□□ -1.2
NEK9-205ENST00000555405 RPS10P46783 165 aaKnown RBP7.55□□□□□ -1.2
NEK9-205ENST00000555405 EMP1P54849 157 aa7.55□□□□□ -1.2
NEK9-205ENST00000555405 MRPL53Q96EL3 112 aaKnown RBP7.55□□□□□ -1.2
NEK9-205ENST00000555405 LINC01587Q99440 93 aa7.55□□□□□ -1.2
NEK9-205ENST00000555405 GNRH2O43555 120 aa7.54□□□□□ -1.2
NEK9-205ENST00000555405 FRZBQ92765 325 aa7.54□□□□□ -1.2
NEK9-205ENST00000555405 MLST8Q9BVC4 326 aa7.54□□□□□ -1.2
NEK9-205ENST00000555405 CDKN1BP46527 198 aa7.54□□□□□ -1.2
NEK9-205ENST00000555405 RPP21Q9H633 154 aaKnown RBP7.54□□□□□ -1.2
NEK9-205ENST00000555405 SRD5A3Q9H8P0 318 aa7.54□□□□□ -1.2
NEK9-205ENST00000555405 NPIPB6E9PJ23 425 aa7.54□□□□□ -1.2
NEK9-205ENST00000555405 INSL3P51460 131 aa7.54□□□□□ -1.2
NEK9-205ENST00000555405 GFI1BQ5VTD9 330 aa7.54□□□□□ -1.2
NEK9-205ENST00000555405 FAM159AQ6UWV7 190 aa7.54□□□□□ -1.2
NEK9-205ENST00000555405 ZFAND2AQ8N6M9 145 aa7.54□□□□□ -1.2
NEK9-205ENST00000555405 SIGLEC8Q9NYZ4 499 aa7.54□□□□□ -1.2
NEK9-205ENST00000555405 RBMY1BA6NDE4 496 aaKnown RBP7.53□□□□□ -1.2
NEK9-205ENST00000555405 RBMY1EA6NEQ0 496 aaKnown RBP7.53□□□□□ -1.2
NEK9-205ENST00000555405 HIGD1CA8MV81 97 aa7.53□□□□□ -1.2
NEK9-205ENST00000555405 RBMY1DP0C7P1 496 aaKnown RBP7.53□□□□□ -1.2
NEK9-205ENST00000555405 FRMD6-AS1P0C7T7 363 aa7.53□□□□□ -1.2
NEK9-205ENST00000555405 HLA-DRB4P13762 266 aa7.53□□□□□ -1.2
NEK9-205ENST00000555405 TSPOP30536 169 aa7.53□□□□□ -1.2
NEK9-205ENST00000555405 ANXA2RQ3ZCQ2 193 aa7.53□□□□□ -1.2
NEK9-205ENST00000555405 ANAPC16Q96DE5 110 aa7.53□□□□□ -1.2
NEK9-205ENST00000555405 NEU1Q99519 415 aa7.53□□□□□ -1.2
NEK9-205ENST00000555405 C11orf21Q9P2W6 132 aa7.53□□□□□ -1.2
NEK9-205ENST00000555405 HLA-DRB4X5D2U9 266 aa7.53□□□□□ -1.2
NEK9-205ENST00000555405 RBAKDNA6NC62 111 aa7.53□□□□□ -1.2
NEK9-205ENST00000555405 A8MWL6 223 aa7.53□□□□□ -1.2
NEK9-205ENST00000555405 KCNIP4Q6PIL6 250 aa7.53□□□□□ -1.2
NEK9-205ENST00000555405 MRAPQ8TCY5 172 aa7.53□□□□□ -1.2
NEK9-205ENST00000555405 BIN3Q9NQY0 253 aa7.53□□□□□ -1.2
NEK9-205ENST00000555405 V9GYV3 84 aa7.53□□□□□ -1.2
NEK9-205ENST00000555405 TRAV21A0A0B4J279 112 aa7.53□□□□□ -1.2
NEK9-205ENST00000555405 H3BVH4 76 aa7.53□□□□□ -1.2
NEK9-205ENST00000555405 PFN1P07737 140 aaKnown RBP7.53□□□□□ -1.2
NEK9-205ENST00000555405 NUTF2P61970 127 aaKnown RBP7.53□□□□□ -1.2
NEK9-205ENST00000555405 OSTCQ9NRP0 149 aa7.53□□□□□ -1.2
NEK9-205ENST00000555405 TP53TG3Q9ULZ0 132 aa7.53□□□□□ -1.2
NEK9-205ENST00000555405 CBY3A6NI87 242 aa7.52□□□□□ -1.21
NEK9-205ENST00000555405 PPP1R2P9O14990 202 aa7.52□□□□□ -1.21
NEK9-205ENST00000555405 CXCL1P09341 107 aa7.52□□□□□ -1.21
NEK9-205ENST00000555405 WFDC9Q8NEX5 89 aa7.52□□□□□ -1.21
NEK9-205ENST00000555405 C7orf71A4D174 169 aa7.52□□□□□ -1.21
NEK9-205ENST00000555405 M0R381 172 aa7.52□□□□□ -1.21
NEK9-205ENST00000555405 LEPP41159 167 aa7.52□□□□□ -1.21
NEK9-205ENST00000555405 ZFP82Q8N141 532 aa7.51□□□□□ -1.21
NEK9-205ENST00000555405 CTDSP1Q9GZU7 261 aa7.51□□□□□ -1.21
NEK9-205ENST00000555405 IL36BQ9NZH7 164 aa7.51□□□□□ -1.21
NEK9-205ENST00000555405 LY96Q9Y6Y9 160 aa7.51□□□□□ -1.21
NEK9-205ENST00000555405 XKRY2A2RUG3 117 aa7.51□□□□□ -1.21
NEK9-205ENST00000555405 BEAN1Q3B7T3 259 aa7.51□□□□□ -1.21
NEK9-205ENST00000555405 KIAA1644Q3SXP7 199 aa7.51□□□□□ -1.21
NEK9-205ENST00000555405 FAM210BQ96KR6 192 aa7.51□□□□□ -1.21
NEK9-205ENST00000555405 IGKV3D-20A0A0C4DH25 116 aa7.5□□□□□ -1.21
NEK9-205ENST00000555405 LYZL1Q6UWQ5 148 aa7.5□□□□□ -1.21
NEK9-205ENST00000555405 SSBP4Q9BWG4 385 aaPredicted RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms