RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 KIR3DS1Q14943 382 aa10.37□□□□□ -0.75
CHD8-208ENST00000555301 TOR2AQ5JU69 321 aa10.37□□□□□ -0.75
CHD8-208ENST00000555301 CLLU1Q5K131 121 aa10.37□□□□□ -0.75
CHD8-208ENST00000555301 Q86TA4 180 aa10.37□□□□□ -0.75
CHD8-208ENST00000555301 TVP23CQ96ET8 276 aa10.37□□□□□ -0.75
CHD8-208ENST00000555301 NEU1Q99519 415 aa10.37□□□□□ -0.75
CHD8-208ENST00000555301 TRAV12-3A0A0B4J271 114 aa10.36□□□□□ -0.75
CHD8-208ENST00000555301 SMIM9A6NGZ8 99 aa10.36□□□□□ -0.75
CHD8-208ENST00000555301 MIFP14174 115 aa10.36□□□□□ -0.75
CHD8-208ENST00000555301 TAS2R60P59551 318 aa10.36□□□□□ -0.75
CHD8-208ENST00000555301 BTN1A1Q13410 526 aa10.36□□□□□ -0.75
CHD8-208ENST00000555301 SMUG1Q53HV7 270 aa10.36□□□□□ -0.75
CHD8-208ENST00000555301 LINC01587Q99440 93 aa10.36□□□□□ -0.75
CHD8-208ENST00000555301 MED9Q9NWA0 146 aa10.36□□□□□ -0.75
CHD8-208ENST00000555301 U3KQK5 164 aa10.36□□□□□ -0.75
CHD8-208ENST00000555301 TMEM250H0YL14 139 aa10.35□□□□□ -0.75
CHD8-208ENST00000555301 ZNF324O75467 553 aaPredicted RBP10.35□□□□□ -0.75
CHD8-208ENST00000555301 LTAP01374 205 aa10.35□□□□□ -0.75
CHD8-208ENST00000555301 RBMY1A1P0DJD3 496 aaKnown RBP10.35□□□□□ -0.75
CHD8-208ENST00000555301 RBMY1CP0DJD4 496 aa10.35□□□□□ -0.75
CHD8-208ENST00000555301 RPL35P42766 123 aaKnown RBP10.35□□□□□ -0.75
CHD8-208ENST00000555301 RBMY1FQ15415 496 aaKnown RBP10.35□□□□□ -0.75
CHD8-208ENST00000555301 PRR9Q5T870 116 aa10.35□□□□□ -0.75
CHD8-208ENST00000555301 Q6AWC8 147 aa10.35□□□□□ -0.75
CHD8-208ENST00000555301 X6R8D5 127 aa10.35□□□□□ -0.75
CHD8-208ENST00000555301 DNAH9Q9NYC9 4486 aa10.35□□□□□ -0.75
CHD8-208ENST00000555301 AGRNO00468 2067 aa10.35□□□□□ -0.75
CHD8-208ENST00000555301 TRAV21A0A0B4J279 112 aa10.34□□□□□ -0.75
CHD8-208ENST00000555301 RRN3P1Q2M238 152 aa10.34□□□□□ -0.75
CHD8-208ENST00000555301 COX8CQ7Z4L0 72 aa10.34□□□□□ -0.75
CHD8-208ENST00000555301 BAGE2Q86Y30 109 aa10.34□□□□□ -0.75
CHD8-208ENST00000555301 PYGO2Q9BRQ0 406 aa10.34□□□□□ -0.75
CHD8-208ENST00000555301 SMDT1Q9H4I9 107 aa10.34□□□□□ -0.75
CHD8-208ENST00000555301 RGS13O14921 159 aa10.33□□□□□ -0.76
CHD8-208ENST00000555301 GCGP01275 180 aa10.33□□□□□ -0.76
CHD8-208ENST00000555301 PEA15Q15121 130 aa10.33□□□□□ -0.76
CHD8-208ENST00000555301 TMEM183AQ8IXX5 376 aa10.33□□□□□ -0.76
CHD8-208ENST00000555301 C8orf49Q96NF6 230 aa10.33□□□□□ -0.76
CHD8-208ENST00000555301 DERL1Q9BUN8 251 aa10.33□□□□□ -0.76
CHD8-208ENST00000555301 PFN1P07737 140 aaKnown RBP10.32□□□□□ -0.76
CHD8-208ENST00000555301 Q8NAQ8 132 aa10.32□□□□□ -0.76
CHD8-208ENST00000555301 SMIM12Q96EX1 92 aa10.32□□□□□ -0.76
CHD8-208ENST00000555301 LINC00467Q9BRT7 94 aa10.32□□□□□ -0.76
CHD8-208ENST00000555301 C11orf68Q9H3H3 251 aaKnown RBP10.32□□□□□ -0.76
CHD8-208ENST00000555301 IGHV1OR15-1A0A075B7D0 117 aa10.31□□□□□ -0.76
CHD8-208ENST00000555301 IGHV4-28A0A0C4DH34 117 aa10.31□□□□□ -0.76
CHD8-208ENST00000555301 TMEM189A5PLL7 270 aa10.31□□□□□ -0.76
CHD8-208ENST00000555301 HTN1P15515 57 aa10.31□□□□□ -0.76
CHD8-208ENST00000555301 GNG4P50150 75 aa10.31□□□□□ -0.76
CHD8-208ENST00000555301 CENPWQ5EE01 88 aa10.31□□□□□ -0.76
CHD8-208ENST00000555301 FAM159AQ6UWV7 190 aa10.31□□□□□ -0.76
CHD8-208ENST00000555301 MLST8Q9BVC4 326 aa10.31□□□□□ -0.76
CHD8-208ENST00000555301 HUWE1Q7Z6Z7 4374 aaKnown RBP10.3□□□□□ -0.76
CHD8-208ENST00000555301 FABP5P3A8MUU1 101 aa10.3□□□□□ -0.76
CHD8-208ENST00000555301 ZNF705GA8MUZ8 300 aaPredicted RBP10.3□□□□□ -0.76
CHD8-208ENST00000555301 SRP19P09132 144 aaKnown RBP10.3□□□□□ -0.76
CHD8-208ENST00000555301 ZNF80P51504 273 aaPredicted RBP10.3□□□□□ -0.76
CHD8-208ENST00000555301 CEBPGP53567 150 aa10.3□□□□□ -0.76
CHD8-208ENST00000555301 ZNF493Q6ZR52 646 aa10.3□□□□□ -0.76
CHD8-208ENST00000555301 EIF4E3Q8N5X7 224 aaKnown RBP10.3□□□□□ -0.76
CHD8-208ENST00000555301 C16orf74Q96GX8 76 aa10.3□□□□□ -0.76
CHD8-208ENST00000555301 ZC2HC1AQ96GY0 325 aa10.3□□□□□ -0.76
CHD8-208ENST00000555301 PARLQ9H300 379 aa10.3□□□□□ -0.76
CHD8-208ENST00000555301 A0A0J9YWU9 116 aa10.29□□□□□ -0.76
CHD8-208ENST00000555301 RAB19A4D1S5 217 aa10.29□□□□□ -0.76
CHD8-208ENST00000555301 CBY3A6NI87 242 aa10.29□□□□□ -0.76
CHD8-208ENST00000555301 C9JCJ5 164 aa10.29□□□□□ -0.76
CHD8-208ENST00000555301 ZNF674Q2M3X9 581 aa10.29□□□□□ -0.76
CHD8-208ENST00000555301 TDRG1Q3Y452 100 aa10.29□□□□□ -0.76
CHD8-208ENST00000555301 ANXA2RQ3ZCQ2 193 aa10.29□□□□□ -0.76
CHD8-208ENST00000555301 FAM162BQ5T6X4 162 aa10.29□□□□□ -0.76
CHD8-208ENST00000555301 Q6ZQT7 251 aa10.29□□□□□ -0.76
CHD8-208ENST00000555301 NHLRC2Q8NBF2 726 aa10.29□□□□□ -0.76
CHD8-208ENST00000555301 TMEM263Q8WUH6 116 aaKnown RBP10.29□□□□□ -0.76
CHD8-208ENST00000555301 KCNS1Q96KK3 526 aa10.29□□□□□ -0.76
CHD8-208ENST00000555301 AZU1P20160 251 aa10.28□□□□□ -0.76
CHD8-208ENST00000555301 MUC21Q5SSG8 566 aa10.28□□□□□ -0.76
CHD8-208ENST00000555301 RNASE8Q8TDE3 154 aaKnown RBP10.28□□□□□ -0.76
CHD8-208ENST00000555301 EDA2RQ9HAV5 297 aa10.28□□□□□ -0.76
CHD8-208ENST00000555301 BIN3Q9NQY0 253 aa10.28□□□□□ -0.76
CHD8-208ENST00000555301 NAGKQ9UJ70 344 aa10.28□□□□□ -0.76
CHD8-208ENST00000555301 TRBV20OR9-2A0A075B6H5 130 aa10.27□□□□□ -0.77
CHD8-208ENST00000555301 TRGV11A0A075B6L2 103 aa10.27□□□□□ -0.77
CHD8-208ENST00000555301 DEFB4AO15263 64 aa10.27□□□□□ -0.77
CHD8-208ENST00000555301 PRM2P04554 102 aa10.27□□□□□ -0.77
CHD8-208ENST00000555301 CRIP1P50238 77 aa10.27□□□□□ -0.77
CHD8-208ENST00000555301 SRSF3P84103 164 aaKnown RBP10.27□□□□□ -0.77
CHD8-208ENST00000555301 FAM74A3Q4VXF1 159 aa10.27□□□□□ -0.77
CHD8-208ENST00000555301 SMIM7Q9BQ49 75 aa10.27□□□□□ -0.77
CHD8-208ENST00000555301 SDF2L1Q9HCN8 221 aa10.27□□□□□ -0.77
CHD8-208ENST00000555301 TEX48A0A1B0GUV7 120 aa10.26□□□□□ -0.77
CHD8-208ENST00000555301 ZNF727A8MUV8 499 aa10.26□□□□□ -0.77
CHD8-208ENST00000555301 C9JQL5 133 aa10.26□□□□□ -0.77
CHD8-208ENST00000555301 SH2D1AO60880 128 aa10.26□□□□□ -0.77
CHD8-208ENST00000555301 IGLV2-8P01709 118 aa10.26□□□□□ -0.77
CHD8-208ENST00000555301 MGST1P10620 155 aaKnown RBP10.26□□□□□ -0.77
CHD8-208ENST00000555301 EMP1P54849 157 aa10.26□□□□□ -0.77
CHD8-208ENST00000555301 IBA57Q5T440 356 aaKnown RBP10.26□□□□□ -0.77
CHD8-208ENST00000555301 NBEAL2Q6ZNJ1 2754 aa10.26□□□□□ -0.77
CHD8-208ENST00000555301 SNURFLB1AK76 121 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms