RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 EXPH5Q8NEV8 1989 aa2.18□□□□□ -2.06
CKS1BP1-201ENST00000555221 KIAA1109Q2LD37 5005 aa2.17□□□□□ -2.06
CKS1BP1-201ENST00000555221 A0A1B0GW54 56 aa2.17□□□□□ -2.06
CKS1BP1-201ENST00000555221 TRAPPC2LH3BP13 241 aa2.17□□□□□ -2.06
CKS1BP1-201ENST00000555221 H7C1C5 153 aa2.17□□□□□ -2.06
CKS1BP1-201ENST00000555221 NDUFB3O43676 98 aa2.17□□□□□ -2.06
CKS1BP1-201ENST00000555221 APOMO95445 188 aa2.17□□□□□ -2.06
CKS1BP1-201ENST00000555221 ISG15P05161 165 aa2.17□□□□□ -2.06
CKS1BP1-201ENST00000555221 PIPP12273 146 aaPredicted RBP2.17□□□□□ -2.06
CKS1BP1-201ENST00000555221 RPL12P30050 165 aaKnown RBP2.17□□□□□ -2.06
CKS1BP1-201ENST00000555221 SRP14P37108 136 aaKnown RBP2.17□□□□□ -2.06
CKS1BP1-201ENST00000555221 RBP2P50120 134 aa2.17□□□□□ -2.06
CKS1BP1-201ENST00000555221 LCN6P62502 163 aa2.17□□□□□ -2.06
CKS1BP1-201ENST00000555221 PPP3R1P63098 170 aa2.17□□□□□ -2.06
CKS1BP1-201ENST00000555221 HES1Q14469 280 aa2.17□□□□□ -2.06
CKS1BP1-201ENST00000555221 OR8B8Q15620 311 aa2.17□□□□□ -2.06
CKS1BP1-201ENST00000555221 BATFQ16520 125 aa2.17□□□□□ -2.06
CKS1BP1-201ENST00000555221 SMIM21Q3B7S5 101 aa2.17□□□□□ -2.06
CKS1BP1-201ENST00000555221 LGALS9BQ3B8N2 356 aa2.17□□□□□ -2.06
CKS1BP1-201ENST00000555221 LINC01590Q5TEZ4 76 aa2.17□□□□□ -2.06
CKS1BP1-201ENST00000555221 RPL22L1Q6P5R6 122 aaKnown RBP2.17□□□□□ -2.06
CKS1BP1-201ENST00000555221 COMMD7Q86VX2 200 aa2.17□□□□□ -2.06
CKS1BP1-201ENST00000555221 LHFPL1Q86WI0 220 aa2.17□□□□□ -2.06
CKS1BP1-201ENST00000555221 ZNF676Q8N7Q3 588 aa2.17□□□□□ -2.06
CKS1BP1-201ENST00000555221 ZNF565Q8N9K5 539 aa2.17□□□□□ -2.06
CKS1BP1-201ENST00000555221 OR4X2Q8NGF9 303 aa2.17□□□□□ -2.06
CKS1BP1-201ENST00000555221 OR8B3Q8NGG8 313 aa2.17□□□□□ -2.06
CKS1BP1-201ENST00000555221 OR5AK2Q8NH90 309 aa2.17□□□□□ -2.06
CKS1BP1-201ENST00000555221 LHFPL5Q8TAF8 219 aa2.17□□□□□ -2.06
CKS1BP1-201ENST00000555221 C10orf105Q8TEF2 133 aa2.17□□□□□ -2.06
CKS1BP1-201ENST00000555221 ZNF418Q8TF45 676 aaPredicted RBP2.17□□□□□ -2.06
CKS1BP1-201ENST00000555221 SFRP2Q96HF1 295 aa2.17□□□□□ -2.06
CKS1BP1-201ENST00000555221 CCL13Q99616 98 aa2.17□□□□□ -2.06
CKS1BP1-201ENST00000555221 PBOV1Q9GZY1 135 aa2.17□□□□□ -2.06
CKS1BP1-201ENST00000555221 FKBP14Q9NWM8 211 aa2.17□□□□□ -2.06
CKS1BP1-201ENST00000555221 GNG8Q9UK08 70 aa2.17□□□□□ -2.06
CKS1BP1-201ENST00000555221 OR52A1Q9UKL2 312 aa2.17□□□□□ -2.06
CKS1BP1-201ENST00000555221 SLC22A13Q9Y226 551 aa2.17□□□□□ -2.06
CKS1BP1-201ENST00000555221 R4GMQ9 66 aa2.17□□□□□ -2.06
CKS1BP1-201ENST00000555221 VPS13CQ709C8 3753 aa2.17□□□□□ -2.06
CKS1BP1-201ENST00000555221 TENM1Q9UKZ4 2725 aa2.17□□□□□ -2.06
CKS1BP1-201ENST00000555221 CSMD2Q7Z408 3487 aa2.16□□□□□ -2.06
CKS1BP1-201ENST00000555221 MEGF8Q7Z7M0 2845 aa2.16□□□□□ -2.06
CKS1BP1-201ENST00000555221 IGKV1D-43A0A0B4J1Z2 117 aa2.16□□□□□ -2.06
CKS1BP1-201ENST00000555221 MDFIC2A0A1B0GVS7 189 aa2.16□□□□□ -2.06
CKS1BP1-201ENST00000555221 C9JCJ5 164 aa2.16□□□□□ -2.06
CKS1BP1-201ENST00000555221 J3QLW9 94 aa2.16□□□□□ -2.06
CKS1BP1-201ENST00000555221 NOS1APO75052 506 aaPredicted RBP2.16□□□□□ -2.06
CKS1BP1-201ENST00000555221 GYPBP06028 91 aa2.16□□□□□ -2.06
CKS1BP1-201ENST00000555221 UBBP0CG47 229 aa2.16□□□□□ -2.06
CKS1BP1-201ENST00000555221 FXYD6P3P58550 94 aa2.16□□□□□ -2.06
CKS1BP1-201ENST00000555221 KRTAP12-1P59990 96 aa2.16□□□□□ -2.06
CKS1BP1-201ENST00000555221 ZNF90Q03938 601 aa2.16□□□□□ -2.06
CKS1BP1-201ENST00000555221 OR2T2Q6IF00 324 aa2.16□□□□□ -2.06
CKS1BP1-201ENST00000555221 OR8D4Q8NGM9 314 aa2.16□□□□□ -2.06
CKS1BP1-201ENST00000555221 OR13C8Q8NGS7 320 aa2.16□□□□□ -2.06
CKS1BP1-201ENST00000555221 RAB2BQ8WUD1 216 aa2.16□□□□□ -2.06
CKS1BP1-201ENST00000555221 BORCS8Q96FH0 119 aa2.16□□□□□ -2.06
CKS1BP1-201ENST00000555221 GPER1Q99527 375 aa2.16□□□□□ -2.06
CKS1BP1-201ENST00000555221 ADAT1Q9BUB4 502 aaKnown RBP2.16□□□□□ -2.06
CKS1BP1-201ENST00000555221 OR51I2Q9H344 312 aa2.16□□□□□ -2.06
CKS1BP1-201ENST00000555221 TMEM138Q9NPI0 162 aa2.16□□□□□ -2.06
CKS1BP1-201ENST00000555221 GPR84Q9NQS5 396 aa2.16□□□□□ -2.06
CKS1BP1-201ENST00000555221 KAAG1Q9UBP8 84 aa2.16□□□□□ -2.06
CKS1BP1-201ENST00000555221 ABCA1O95477 2261 aa2.16□□□□□ -2.06
CKS1BP1-201ENST00000555221 NCKAP5O14513 1909 aa2.15□□□□□ -2.06
CKS1BP1-201ENST00000555221 ACANP16112 2415 aa2.15□□□□□ -2.07
CKS1BP1-201ENST00000555221 hADV38S2A0JD32 116 aa2.15□□□□□ -2.07
CKS1BP1-201ENST00000555221 DISC1C4P0D8 188 aa2.15□□□□□ -2.07
CKS1BP1-201ENST00000555221 PDCD5O14737 125 aa2.15□□□□□ -2.07
CKS1BP1-201ENST00000555221 RPP14O95059 124 aaKnown RBP2.15□□□□□ -2.07
CKS1BP1-201ENST00000555221 RBP4P02753 201 aa2.15□□□□□ -2.07
CKS1BP1-201ENST00000555221 MSMBP08118 114 aa2.15□□□□□ -2.07
CKS1BP1-201ENST00000555221 CCL1P22362 96 aa2.15□□□□□ -2.07
CKS1BP1-201ENST00000555221 HAAOP46952 286 aa2.15□□□□□ -2.07
CKS1BP1-201ENST00000555221 CAV3P56539 151 aa2.15□□□□□ -2.07
CKS1BP1-201ENST00000555221 TAS2R20P59543 309 aa2.15□□□□□ -2.07
CKS1BP1-201ENST00000555221 MRPS15P82914 257 aaKnown RBP2.15□□□□□ -2.07
CKS1BP1-201ENST00000555221 PRDX4Q13162 271 aa2.15□□□□□ -2.07
CKS1BP1-201ENST00000555221 RSU1Q15404 277 aa2.15□□□□□ -2.07
CKS1BP1-201ENST00000555221 PCOTHQ58A44 107 aa2.15□□□□□ -2.07
CKS1BP1-201ENST00000555221 GLYATL3Q5SZD4 288 aa2.15□□□□□ -2.07
CKS1BP1-201ENST00000555221 TEX36Q5VZQ5 186 aa2.15□□□□□ -2.07
CKS1BP1-201ENST00000555221 GLT8D1Q68CQ7 371 aa2.15□□□□□ -2.07
CKS1BP1-201ENST00000555221 GPHB5Q86YW7 130 aa2.15□□□□□ -2.07
CKS1BP1-201ENST00000555221 OR5AS1Q8N127 324 aa2.15□□□□□ -2.07
CKS1BP1-201ENST00000555221 WFDC11Q8NEX6 87 aa2.15□□□□□ -2.07
CKS1BP1-201ENST00000555221 PXT1Q8NFP0 134 aa2.15□□□□□ -2.07
CKS1BP1-201ENST00000555221 OR1M1Q8NGA1 313 aa2.15□□□□□ -2.07
CKS1BP1-201ENST00000555221 OR51A2Q8NGJ7 313 aa2.15□□□□□ -2.07
CKS1BP1-201ENST00000555221 DCANP1Q8TF63 244 aa2.15□□□□□ -2.07
CKS1BP1-201ENST00000555221 GNPNAT1Q96EK6 184 aaPredicted RBP2.15□□□□□ -2.07
CKS1BP1-201ENST00000555221 BPESC1Q9GZL8 116 aa2.15□□□□□ -2.07
CKS1BP1-201ENST00000555221 CCDC90BQ9GZT6 254 aa2.15□□□□□ -2.07
CKS1BP1-201ENST00000555221 CST11Q9H112 138 aa2.15□□□□□ -2.07
CKS1BP1-201ENST00000555221 TLNRD1Q9H1K6 362 aa2.15□□□□□ -2.07
CKS1BP1-201ENST00000555221 UBAP1Q9NZ09 502 aa2.15□□□□□ -2.07
CKS1BP1-201ENST00000555221 PRO2289Q9P1D8 64 aa2.15□□□□□ -2.07
CKS1BP1-201ENST00000555221 V9GYS6 101 aa2.15□□□□□ -2.07
CKS1BP1-201ENST00000555221 NSD1Q96L73 2696 aaPredicted RBP2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms