RNA–Protein interactions for RNA: ENST00000555038.5

ARHGEF40-204, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-204ENST00000555038 ATOH7Q8N100 152 aa16.2■□□□□ 0.18
ARHGEF40-204ENST00000555038 DAZ1Q9NQZ3 744 aaKnown RBP16.2■□□□□ 0.18
ARHGEF40-204ENST00000555038 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.19■□□□□ 0.186e-6■□□□□ 9.4
ARHGEF40-204ENST00000555038 COL12A1Q99715 3063 aa16.19■□□□□ 0.18
ARHGEF40-204ENST00000555038 TRBV7-9A0A0J9YWB2 115 aa16.19■□□□□ 0.18
ARHGEF40-204ENST00000555038 SSTP61278 116 aa16.19■□□□□ 0.18
ARHGEF40-204ENST00000555038 DEFB112Q30KQ8 113 aa16.19■□□□□ 0.18
ARHGEF40-204ENST00000555038 Q6ZS46 218 aa16.19■□□□□ 0.18
ARHGEF40-204ENST00000555038 LINC00173Q6ZV60 143 aa16.19■□□□□ 0.18
ARHGEF40-204ENST00000555038 OR10J6PQ8NGY7 276 aa16.19■□□□□ 0.18
ARHGEF40-204ENST00000555038 ST20Q9HBF5 79 aa16.19■□□□□ 0.18
ARHGEF40-204ENST00000555038 PEF1Q9UBV8 284 aaKnown RBP16.19■□□□□ 0.18
ARHGEF40-204ENST00000555038 IFI27P40305 119 aaPredicted RBP16.18■□□□□ 0.18
ARHGEF40-204ENST00000555038 ZNF747Q9BV97 191 aa16.18■□□□□ 0.18
ARHGEF40-204ENST00000555038 HNRNPA3P51991 378 aaKnown RBP16.18■□□□□ 0.18
ARHGEF40-204ENST00000555038 CACNG7P62955 275 aa16.18■□□□□ 0.18
ARHGEF40-204ENST00000555038 Q6ZN92 141 aa16.18■□□□□ 0.18
ARHGEF40-204ENST00000555038 RNF185Q96GF1 192 aa16.18■□□□□ 0.18
ARHGEF40-204ENST00000555038 C20orf173Q96LM9 149 aa16.18■□□□□ 0.18
ARHGEF40-204ENST00000555038 SVEP1Q4LDE5 3571 aa16.17■□□□□ 0.18
ARHGEF40-204ENST00000555038 FLNCQ14315 2725 aa16.17■□□□□ 0.18
ARHGEF40-204ENST00000555038 IGHV4-4A0A075B6R2 117 aa16.17■□□□□ 0.18
ARHGEF40-204ENST00000555038 MUC21A0A0G2JKD1 596 aa16.17■□□□□ 0.18
ARHGEF40-204ENST00000555038 MUC21A0A140T8X8 626 aa16.17■□□□□ 0.18
ARHGEF40-204ENST00000555038 IGLL1P15814 213 aa16.17■□□□□ 0.18
ARHGEF40-204ENST00000555038 PSMB8P28062 276 aa16.17■□□□□ 0.18
ARHGEF40-204ENST00000555038 FAM106AQ4KMX7 169 aa16.17■□□□□ 0.18
ARHGEF40-204ENST00000555038 MUC21Q5SSG8 566 aa16.17■□□□□ 0.18
ARHGEF40-204ENST00000555038 LINC01545Q5VT33 79 aa16.17■□□□□ 0.18
ARHGEF40-204ENST00000555038 C11orf21Q9P2W6 132 aa16.17■□□□□ 0.18
ARHGEF40-204ENST00000555038 SNAI2O43623 268 aa16.16■□□□□ 0.18
ARHGEF40-204ENST00000555038 TCF21O43680 179 aa16.16■□□□□ 0.18
ARHGEF40-204ENST00000555038 IGHV4-59P01825 116 aa16.16■□□□□ 0.18
ARHGEF40-204ENST00000555038 RHPN1-AS1Q9BWJ2 59 aa16.16■□□□□ 0.18
ARHGEF40-204ENST00000555038 BEX4Q9NWD9 120 aaPredicted RBP16.16■□□□□ 0.18
ARHGEF40-204ENST00000555038 MRPS16Q9Y3D3 137 aaKnown RBP16.16■□□□□ 0.18
ARHGEF40-204ENST00000555038 TGFAP01135 160 aa16.15■□□□□ 0.18
ARHGEF40-204ENST00000555038 FSHBP01225 129 aa16.15■□□□□ 0.18
ARHGEF40-204ENST00000555038 SMIM15Q7Z3B0 74 aa16.15■□□□□ 0.18
ARHGEF40-204ENST00000555038 MAP1LC3AQ9H492 121 aa16.15■□□□□ 0.18
ARHGEF40-204ENST00000555038 SMPXQ9UHP9 88 aa16.15■□□□□ 0.18
ARHGEF40-204ENST00000555038 LINC01546A6NGU7 62 aa16.15■□□□□ 0.18
ARHGEF40-204ENST00000555038 HSBP1L1C9JCN9 74 aa16.15■□□□□ 0.18
ARHGEF40-204ENST00000555038 NPYP01303 97 aa16.15■□□□□ 0.18
ARHGEF40-204ENST00000555038 MAJINQ3KP22 176 aa16.15■□□□□ 0.18
ARHGEF40-204ENST00000555038 LRRC75A-AS1Q8N1F1 130 aa16.15■□□□□ 0.18
ARHGEF40-204ENST00000555038 MSRB1Q9NZV6 116 aa16.15■□□□□ 0.18
ARHGEF40-204ENST00000555038 SPG11Q96JI7 2443 aa16.15■□□□□ 0.18
ARHGEF40-204ENST00000555038 LOC389332A0A1B0GUA5 103 aa16.14■□□□□ 0.17
ARHGEF40-204ENST00000555038 HBDP02042 147 aa16.14■□□□□ 0.17
ARHGEF40-204ENST00000555038 RPLP1P05386 114 aaKnown RBP16.14■□□□□ 0.17
ARHGEF40-204ENST00000555038 SRSF1Q07955 248 aaKnown RBP eCLIP16.14■□□□□ 0.171e-6■■■■□ 20.3
ARHGEF40-204ENST00000555038 UFC1Q9Y3C8 167 aa16.14■□□□□ 0.17
ARHGEF40-204ENST00000555038 A0A096LNJ9 63 aa16.13■□□□□ 0.17
ARHGEF40-204ENST00000555038 TRAV21A0A0B4J279 112 aa16.13■□□□□ 0.17
ARHGEF40-204ENST00000555038 FOXE3Q13461 319 aa16.13■□□□□ 0.17
ARHGEF40-204ENST00000555038 APRG1Q8IVJ8 170 aa16.13■□□□□ 0.17
ARHGEF40-204ENST00000555038 FAM19A4Q96LR4 140 aa16.13■□□□□ 0.17
ARHGEF40-204ENST00000555038 MS4A6AQ9H2W1 248 aa16.13■□□□□ 0.17
ARHGEF40-204ENST00000555038 TSPOP30536 169 aa16.13■□□□□ 0.17
ARHGEF40-204ENST00000555038 ZFAND2AQ8N6M9 145 aa16.13■□□□□ 0.17
ARHGEF40-204ENST00000555038 NXT2Q9NPJ8 142 aaKnown RBP16.13■□□□□ 0.17
ARHGEF40-204ENST00000555038 PRSS57Q6UWY2 283 aa16.12■□□□□ 0.17
ARHGEF40-204ENST00000555038 VPREB3Q9UKI3 123 aa16.12■□□□□ 0.17
ARHGEF40-204ENST00000555038 MED14OSP0DP75 135 aa16.11■□□□□ 0.17
ARHGEF40-204ENST00000555038 TM4SF20Q53R12 229 aa16.11■□□□□ 0.17
ARHGEF40-204ENST00000555038 OR8A1Q8NGG7 326 aa16.11■□□□□ 0.17
ARHGEF40-204ENST00000555038 MYO18BQ8IUG5 2567 aa16.1■□□□□ 0.17
ARHGEF40-204ENST00000555038 SMKR1H3BMG3 65 aa16.1■□□□□ 0.17
ARHGEF40-204ENST00000555038 ID1P41134 155 aa16.1■□□□□ 0.17
ARHGEF40-204ENST00000555038 RPL11P62913 178 aaKnown RBP16.1■□□□□ 0.17
ARHGEF40-204ENST00000555038 COL5A1-AS1Q5SY13 56 aa16.1■□□□□ 0.17
ARHGEF40-204ENST00000555038 LCNL1Q6ZST4 164 aa16.1■□□□□ 0.17
ARHGEF40-204ENST00000555038 DEFB125Q8N687 156 aa16.1■□□□□ 0.17
ARHGEF40-204ENST00000555038 ZNF462Q96JM2 2506 aa16.1■□□□□ 0.17
ARHGEF40-204ENST00000555038 VPS13CQ709C8 3753 aa16.1■□□□□ 0.17
ARHGEF40-204ENST00000555038 NCR2O95944 276 aa16.1■□□□□ 0.17
ARHGEF40-204ENST00000555038 IGHV4-31P0DP07 118 aa16.1■□□□□ 0.17
ARHGEF40-204ENST00000555038 PRSS47A8MTI9 375 aa16.09■□□□□ 0.17
ARHGEF40-204ENST00000555038 TNFRSF6BO95407 300 aa16.09■□□□□ 0.17
ARHGEF40-204ENST00000555038 PRR9Q5T870 116 aa16.09■□□□□ 0.17
ARHGEF40-204ENST00000555038 Q6YL49 198 aa16.09■□□□□ 0.17
ARHGEF40-204ENST00000555038 RNF223E7ERA6 249 aa16.08■□□□□ 0.17
ARHGEF40-204ENST00000555038 ELANEP08246 267 aa16.08■□□□□ 0.17
ARHGEF40-204ENST00000555038 DEFB113Q30KQ7 82 aa16.08■□□□□ 0.17
ARHGEF40-204ENST00000555038 LGALS9BQ3B8N2 356 aa16.08■□□□□ 0.17
ARHGEF40-204ENST00000555038 TMEM95Q3KNT9 176 aa16.08■□□□□ 0.17
ARHGEF40-204ENST00000555038 SPANXN1Q5VSR9 72 aa16.08■□□□□ 0.17
ARHGEF40-204ENST00000555038 LGALS9CQ6DKI2 356 aa16.08■□□□□ 0.17
ARHGEF40-204ENST00000555038 TCAPO15273 167 aa16.08■□□□□ 0.16
ARHGEF40-204ENST00000555038 DPF1Q92782 380 aa16.08■□□□□ 0.16
ARHGEF40-204ENST00000555038 TIMM8BQ9Y5J9 83 aaPredicted RBP16.08■□□□□ 0.16
ARHGEF40-204ENST00000555038 A1L4Q6 167 aa16.07■□□□□ 0.16
ARHGEF40-204ENST00000555038 MYOZ3Q8TDC0 251 aa16.06■□□□□ 0.16
ARHGEF40-204ENST00000555038 hDV102S1A0JD36 115 aa16.05■□□□□ 0.16
ARHGEF40-204ENST00000555038 Q8N8P6 123 aa16.05■□□□□ 0.16
ARHGEF40-204ENST00000555038 MRAP2Q96G30 205 aa16.05■□□□□ 0.16
ARHGEF40-204ENST00000555038 EVI2AP22794 236 aa16.05■□□□□ 0.16
ARHGEF40-204ENST00000555038 ASIPP42127 132 aa16.05■□□□□ 0.16
ARHGEF40-204ENST00000555038 SLC25A34Q6PIV7 304 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms