RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 IGF2RP11717 2491 aa6.93□□□□□ -1.3
SYNE2-217ENST00000555022 TRBV20-1A0A075B6N2 111 aa6.93□□□□□ -1.3
SYNE2-217ENST00000555022 FAM90A27PA6NNH2 459 aa6.93□□□□□ -1.3
SYNE2-217ENST00000555022 SCGB1C2P0DMR2 95 aa6.93□□□□□ -1.3
SYNE2-217ENST00000555022 FHL3Q13643 280 aa6.93□□□□□ -1.3
SYNE2-217ENST00000555022 GFRALQ6UXV0 394 aa6.93□□□□□ -1.3
SYNE2-217ENST00000555022 FOXI2Q6ZQN5 318 aa6.93□□□□□ -1.3
SYNE2-217ENST00000555022 DTX2Q86UW9 622 aa6.93□□□□□ -1.3
SYNE2-217ENST00000555022 CFHR4Q92496 578 aa6.93□□□□□ -1.3
SYNE2-217ENST00000555022 PLEKHB2Q96CS7 222 aa6.93□□□□□ -1.3
SYNE2-217ENST00000555022 PLSCR4Q9NRQ2 329 aa6.93□□□□□ -1.3
SYNE2-217ENST00000555022 LINC00527Q9UJ94 153 aa6.93□□□□□ -1.3
SYNE2-217ENST00000555022 IGHV1-3A0A0C4DH29 117 aa6.92□□□□□ -1.3
SYNE2-217ENST00000555022 K7EIM0 57 aa6.92□□□□□ -1.3
SYNE2-217ENST00000555022 MYOZ3Q8TDC0 251 aa6.92□□□□□ -1.3
SYNE2-217ENST00000555022 PRR25Q96S07 402 aa6.92□□□□□ -1.3
SYNE2-217ENST00000555022 IGF1P05019 195 aa6.92□□□□□ -1.3
SYNE2-217ENST00000555022 ECSCRQ19T08 205 aa6.92□□□□□ -1.3
SYNE2-217ENST00000555022 SPANXN1Q5VSR9 72 aa6.92□□□□□ -1.3
SYNE2-217ENST00000555022 PHLDA1Q8WV24 401 aaPredicted RBP6.92□□□□□ -1.3
SYNE2-217ENST00000555022 NACAE9PAV3 2078 aa6.92□□□□□ -1.3
SYNE2-217ENST00000555022 IGLV3-9A0A075B6K5 115 aa6.92□□□□□ -1.3
SYNE2-217ENST00000555022 PRSS29PA6NIE9 313 aa6.92□□□□□ -1.3
SYNE2-217ENST00000555022 I3L2K1 104 aa6.92□□□□□ -1.3
SYNE2-217ENST00000555022 XGP55808 180 aa6.92□□□□□ -1.3
SYNE2-217ENST00000555022 ADIPOQQ15848 244 aa6.92□□□□□ -1.3
SYNE2-217ENST00000555022 NFE4Q86UQ8 179 aa6.92□□□□□ -1.3
SYNE2-217ENST00000555022 RNF185Q96GF1 192 aa6.92□□□□□ -1.3
SYNE2-217ENST00000555022 RAX2Q96IS3 184 aa6.92□□□□□ -1.3
SYNE2-217ENST00000555022 FAM215AQ9Y5M1 114 aa6.92□□□□□ -1.3
SYNE2-217ENST00000555022 C17orf100A8MU93 164 aa6.91□□□□□ -1.3
SYNE2-217ENST00000555022 OR11H12B2RN74 326 aa6.91□□□□□ -1.3
SYNE2-217ENST00000555022 B5MCH6 92 aa6.91□□□□□ -1.3
SYNE2-217ENST00000555022 OR11H1Q8NG94 326 aa6.91□□□□□ -1.3
SYNE2-217ENST00000555022 OR11H2Q8NH07 326 aa6.91□□□□□ -1.3
SYNE2-217ENST00000555022 RPL39LQ96EH5 51 aaKnown RBP6.91□□□□□ -1.3
SYNE2-217ENST00000555022 H3BRN7 92 aa6.91□□□□□ -1.3
SYNE2-217ENST00000555022 CRYGCP07315 174 aa6.91□□□□□ -1.3
SYNE2-217ENST00000555022 RPL7P18124 248 aaKnown RBP6.91□□□□□ -1.3
SYNE2-217ENST00000555022 TRAV17A0A0B4J275 112 aa6.91□□□□□ -1.3
SYNE2-217ENST00000555022 ZNF815PA8K554 130 aa6.91□□□□□ -1.3
SYNE2-217ENST00000555022 E9PLD3 99 aa6.91□□□□□ -1.3
SYNE2-217ENST00000555022 TM4SF5O14894 197 aa6.91□□□□□ -1.3
SYNE2-217ENST00000555022 SLC25A16P16260 332 aa6.91□□□□□ -1.3
SYNE2-217ENST00000555022 RRN3P1Q2M238 152 aa6.91□□□□□ -1.3
SYNE2-217ENST00000555022 DEFB124Q8NES8 71 aa6.91□□□□□ -1.3
SYNE2-217ENST00000555022 C11orf21Q9P2W6 132 aa6.91□□□□□ -1.3
SYNE2-217ENST00000555022 OTOGLQ3ZCN5 2332 aa6.9□□□□□ -1.3
SYNE2-217ENST00000555022 TMEM178BH3BS89 294 aa6.9□□□□□ -1.31
SYNE2-217ENST00000555022 CD59P13987 128 aa6.9□□□□□ -1.31
SYNE2-217ENST00000555022 RPL11P62913 178 aaKnown RBP6.9□□□□□ -1.31
SYNE2-217ENST00000555022 C8orf86Q6ZUL3 223 aa6.9□□□□□ -1.31
SYNE2-217ENST00000555022 ATP5IP56385 69 aaPredicted RBP6.89□□□□□ -1.31
SYNE2-217ENST00000555022 NPC2P61916 151 aa6.89□□□□□ -1.31
SYNE2-217ENST00000555022 TEX36Q5VZQ5 186 aa6.89□□□□□ -1.31
SYNE2-217ENST00000555022 C1orf162Q8NEQ5 155 aaPredicted RBP6.89□□□□□ -1.31
SYNE2-217ENST00000555022 SCGB3A1Q96QR1 104 aa6.89□□□□□ -1.31
SYNE2-217ENST00000555022 RAXQ9Y2V3 346 aa6.89□□□□□ -1.31
SYNE2-217ENST00000555022 SETD2Q9BYW2 2564 aaPredicted RBP6.89□□□□□ -1.31
SYNE2-217ENST00000555022 HOXA3O43365 443 aaPredicted RBP6.89□□□□□ -1.31
SYNE2-217ENST00000555022 MC5RP33032 325 aa6.89□□□□□ -1.31
SYNE2-217ENST00000555022 C14orf178Q8N769 122 aaPredicted RBP6.89□□□□□ -1.31
SYNE2-217ENST00000555022 CSPG4Q6UVK1 2322 aa6.89□□□□□ -1.31
SYNE2-217ENST00000555022 SMCPP49901 116 aaPredicted RBP6.89□□□□□ -1.31
SYNE2-217ENST00000555022 ANAPC13Q9BS18 74 aa6.89□□□□□ -1.31
SYNE2-217ENST00000555022 PRADC1Q9BSG0 188 aa6.89□□□□□ -1.31
SYNE2-217ENST00000555022 ADARB2-AS1A8MUL3 147 aa6.88□□□□□ -1.31
SYNE2-217ENST00000555022 CLEC3BP05452 202 aa6.88□□□□□ -1.31
SYNE2-217ENST00000555022 TMEM78Q5T7P6 136 aa6.88□□□□□ -1.31
SYNE2-217ENST00000555022 F8W1H4 67 aa6.88□□□□□ -1.31
SYNE2-217ENST00000555022 SCGB2A1O75556 95 aa6.88□□□□□ -1.31
SYNE2-217ENST00000555022 IGHG3P01860 377 aa6.88□□□□□ -1.31
SYNE2-217ENST00000555022 SRD5A1P18405 259 aa6.88□□□□□ -1.31
SYNE2-217ENST00000555022 MRAP2Q96G30 205 aa6.88□□□□□ -1.31
SYNE2-217ENST00000555022 IGHV3OR16-10A0A075B7F0 116 aa6.88□□□□□ -1.31
SYNE2-217ENST00000555022 VSTM5A8MXK1 200 aa6.88□□□□□ -1.31
SYNE2-217ENST00000555022 FOXI1Q12951 378 aa6.88□□□□□ -1.31
SYNE2-217ENST00000555022 Q1RN00 199 aa6.88□□□□□ -1.31
SYNE2-217ENST00000555022 TMEM155Q4W5P6 130 aa6.88□□□□□ -1.31
SYNE2-217ENST00000555022 MORN3Q6PF18 240 aaPredicted RBP6.88□□□□□ -1.31
SYNE2-217ENST00000555022 BUB1B-PAK6H3BSN5 160 aa6.87□□□□□ -1.31
SYNE2-217ENST00000555022 CDX4O14627 284 aaPredicted RBP6.87□□□□□ -1.31
SYNE2-217ENST00000555022 IGHV4-39P01824 125 aa6.87□□□□□ -1.31
SYNE2-217ENST00000555022 S100A4P26447 101 aaKnown RBP6.87□□□□□ -1.31
SYNE2-217ENST00000555022 ZNF493Q6ZR52 646 aa6.87□□□□□ -1.31
SYNE2-217ENST00000555022 TRPT1Q86TN4 253 aaKnown RBP6.87□□□□□ -1.31
SYNE2-217ENST00000555022 C21orf62Q9NYP8 219 aa6.87□□□□□ -1.31
SYNE2-217ENST00000555022 IGKV3D-20A0A0C4DH25 116 aa6.87□□□□□ -1.31
SYNE2-217ENST00000555022 SIVA1O15304 175 aa6.87□□□□□ -1.31
SYNE2-217ENST00000555022 GATA4P43694 442 aa6.87□□□□□ -1.31
SYNE2-217ENST00000555022 PAX8Q06710 450 aa6.87□□□□□ -1.31
SYNE2-217ENST00000555022 LAGE3Q14657 143 aa6.87□□□□□ -1.31
SYNE2-217ENST00000555022 CDIP1Q9H305 208 aa6.87□□□□□ -1.31
SYNE2-217ENST00000555022 SMAD5-AS1Q9Y6J3 95 aa6.87□□□□□ -1.31
SYNE2-217ENST00000555022 LGALS1P09382 135 aaKnown RBP6.86□□□□□ -1.31
SYNE2-217ENST00000555022 TMEM170BQ5T4T1 132 aa6.86□□□□□ -1.31
SYNE2-217ENST00000555022 Q6AWC8 147 aa6.86□□□□□ -1.31
SYNE2-217ENST00000555022 LINC01560Q8TB33 94 aa6.86□□□□□ -1.31
SYNE2-217ENST00000555022 TMEM14CQ9P0S9 112 aa6.86□□□□□ -1.31
SYNE2-217ENST00000555022 FABP5P3A8MUU1 101 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms