RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	TRAV30	A0A087WSZ9	112 aa		3.42	□□□□□ -1.86
PSMC6-208	ENST00000554956		A0A087WXM4	84 aa		3.42	□□□□□ -1.86
PSMC6-208	ENST00000554956	CEBPZOS	A8MTT3	80 aa		3.42	□□□□□ -1.86
PSMC6-208	ENST00000554956	FAM25A	B3EWG3	89 aa		3.42	□□□□□ -1.86
PSMC6-208	ENST00000554956	FAM25C	B3EWG5	89 aa		3.42	□□□□□ -1.86
PSMC6-208	ENST00000554956	FAM25G	B3EWG6	89 aa		3.42	□□□□□ -1.86
PSMC6-208	ENST00000554956	HSBP1L1	C9JCN9	74 aa		3.42	□□□□□ -1.86
PSMC6-208	ENST00000554956	HSBP1	O75506	76 aa		3.42	□□□□□ -1.86
PSMC6-208	ENST00000554956	EIF3G	O75821	320 aa	Known RBP eCLIP	3.42	□□□□□ -1.86
PSMC6-208	ENST00000554956	RAB3D	O95716	219 aa		3.42	□□□□□ -1.86
PSMC6-208	ENST00000554956	SPART-AS1	P0CW21	52 aa		3.42	□□□□□ -1.86
PSMC6-208	ENST00000554956	RD3L	P0DJH9	198 aa		3.42	□□□□□ -1.86
PSMC6-208	ENST00000554956	SLC25A4	P12235	298 aa		3.42	□□□□□ -1.86
PSMC6-208	ENST00000554956	HTN3	P15516	51 aa		3.42	□□□□□ -1.86
PSMC6-208	ENST00000554956	PMCH	P20382	165 aa		3.42	□□□□□ -1.86
PSMC6-208	ENST00000554956	HTR2B	P41595	481 aa		3.42	□□□□□ -1.86
PSMC6-208	ENST00000554956	SCGB2B2	Q4G0G5	96 aa		3.42	□□□□□ -1.86
PSMC6-208	ENST00000554956	AMTN	Q6UX39	209 aa		3.42	□□□□□ -1.86
PSMC6-208	ENST00000554956	LYZL2	Q7Z4W2	148 aa		3.42	□□□□□ -1.86
PSMC6-208	ENST00000554956	ARRDC1	Q8N5I2	433 aa		3.42	□□□□□ -1.86
PSMC6-208	ENST00000554956	TMEM229B	Q8NBD8	167 aa		3.42	□□□□□ -1.86
PSMC6-208	ENST00000554956	RNASEH2C	Q8TDP1	164 aa	Known RBP	3.42	□□□□□ -1.86
PSMC6-208	ENST00000554956	RBPMS	Q93062	196 aa	Known RBP	3.42	□□□□□ -1.86
PSMC6-208	ENST00000554956	LINC00052	Q96N35	136 aa		3.42	□□□□□ -1.86
PSMC6-208	ENST00000554956	PDCD10	Q9BUL8	212 aa		3.42	□□□□□ -1.86
PSMC6-208	ENST00000554956	SAV1	Q9H4B6	383 aa	Predicted RBP	3.42	□□□□□ -1.86
PSMC6-208	ENST00000554956	NAA60	Q9H7X0	242 aa		3.42	□□□□□ -1.86
PSMC6-208	ENST00000554956	ENY2	Q9NPA8	101 aa		3.42	□□□□□ -1.86
PSMC6-208	ENST00000554956	COPZ2	Q9P299	210 aa		3.42	□□□□□ -1.86
PSMC6-208	ENST00000554956	YTHDF2	Q9Y5A9	579 aa	Known RBP	3.42	□□□□□ -1.86
PSMC6-208	ENST00000554956	TMEM56-RWDD3	S4R434	201 aa		3.42	□□□□□ -1.86
PSMC6-208	ENST00000554956		A0A0J9YX75	114 aa		3.41	□□□□□ -1.86
PSMC6-208	ENST00000554956	PLAC8L1	A1L4L8	177 aa		3.41	□□□□□ -1.86
PSMC6-208	ENST00000554956	CRYM-AS1	A6NIL9	109 aa		3.41	□□□□□ -1.86
PSMC6-208	ENST00000554956	ZNF705G	A8MUZ8	300 aa	Predicted RBP	3.41	□□□□□ -1.86
PSMC6-208	ENST00000554956	AGPAT2	O15120	278 aa		3.41	□□□□□ -1.86
PSMC6-208	ENST00000554956	CRX	O43186	299 aa	Predicted RBP	3.41	□□□□□ -1.86
PSMC6-208	ENST00000554956	GABARAP	O95166	117 aa		3.41	□□□□□ -1.86
PSMC6-208	ENST00000554956	IFNA10	P01566	189 aa		3.41	□□□□□ -1.86
PSMC6-208	ENST00000554956	NPY1R	P25929	384 aa		3.41	□□□□□ -1.86
PSMC6-208	ENST00000554956	RORC	P51449	518 aa		3.41	□□□□□ -1.86
PSMC6-208	ENST00000554956	AP2S1	P53680	142 aa	Predicted RBP	3.41	□□□□□ -1.86
PSMC6-208	ENST00000554956	SNRPD3	P62318	126 aa	Known RBP	3.41	□□□□□ -1.86
PSMC6-208	ENST00000554956	SUPT4H1	P63272	117 aa	Known RBP	3.41	□□□□□ -1.86
PSMC6-208	ENST00000554956	OR2F1	Q13607	317 aa		3.41	□□□□□ -1.86
PSMC6-208	ENST00000554956	FAM78B	Q5VT40	261 aa		3.41	□□□□□ -1.86
PSMC6-208	ENST00000554956	FOXI2	Q6ZQN5	318 aa		3.41	□□□□□ -1.86
PSMC6-208	ENST00000554956	OR4B1	Q8NGF8	309 aa		3.41	□□□□□ -1.86
PSMC6-208	ENST00000554956	OR4C16	Q8NGL9	310 aa		3.41	□□□□□ -1.86
PSMC6-208	ENST00000554956	RNASE11	Q8TAA1	199 aa	Known RBP	3.41	□□□□□ -1.86
PSMC6-208	ENST00000554956	ZFAND1	Q8TCF1	268 aa		3.41	□□□□□ -1.86
PSMC6-208	ENST00000554956	ISOC2	Q96AB3	205 aa		3.41	□□□□□ -1.86
PSMC6-208	ENST00000554956	PHYHIPL	Q96FC7	376 aa		3.41	□□□□□ -1.86
PSMC6-208	ENST00000554956	NARS2	Q96I59	477 aa	Known RBP	3.41	□□□□□ -1.86
PSMC6-208	ENST00000554956	PBDC1	Q9BVG4	233 aa		3.41	□□□□□ -1.86
PSMC6-208	ENST00000554956	RCL1	Q9Y2P8	373 aa	Known RBP	3.41	□□□□□ -1.86
PSMC6-208	ENST00000554956	LRP1B	Q9NZR2	4599 aa		3.41	□□□□□ -1.86
PSMC6-208	ENST00000554956	TRAV6	A0A075B6T7	132 aa		3.4	□□□□□ -1.87
PSMC6-208	ENST00000554956	TRAV8-2	A0A0B4J237	113 aa		3.4	□□□□□ -1.87
PSMC6-208	ENST00000554956	SMIM9	A6NGZ8	99 aa		3.4	□□□□□ -1.87
PSMC6-208	ENST00000554956		A8MTW9	85 aa		3.4	□□□□□ -1.87
PSMC6-208	ENST00000554956		M0R2Z0	102 aa		3.4	□□□□□ -1.87
PSMC6-208	ENST00000554956	ATG12	O94817	140 aa		3.4	□□□□□ -1.87
PSMC6-208	ENST00000554956	SNAPIN	O95295	136 aa		3.4	□□□□□ -1.87
PSMC6-208	ENST00000554956	IFNA21	P01568	189 aa		3.4	□□□□□ -1.87
PSMC6-208	ENST00000554956	BTC	P35070	178 aa		3.4	□□□□□ -1.87
PSMC6-208	ENST00000554956	EIF2B2	P49770	351 aa	Known RBP	3.4	□□□□□ -1.87
PSMC6-208	ENST00000554956	TAS2R19	P59542	299 aa		3.4	□□□□□ -1.87
PSMC6-208	ENST00000554956	NUTF2	P61970	127 aa	Known RBP	3.4	□□□□□ -1.87
PSMC6-208	ENST00000554956	PSG9	Q00887	426 aa		3.4	□□□□□ -1.87
PSMC6-208	ENST00000554956	SPCS2	Q15005	226 aa		3.4	□□□□□ -1.87
PSMC6-208	ENST00000554956	C9orf129	Q5T035	196 aa	Known RBP	3.4	□□□□□ -1.87
PSMC6-208	ENST00000554956	C1orf134	Q5TEV5	83 aa		3.4	□□□□□ -1.87
PSMC6-208	ENST00000554956	UBE2DNL	Q8IWF7	75 aa		3.4	□□□□□ -1.87
PSMC6-208	ENST00000554956	LGI3	Q8N145	548 aa		3.4	□□□□□ -1.87
PSMC6-208	ENST00000554956	OR51S1	Q8NGJ8	323 aa		3.4	□□□□□ -1.87
PSMC6-208	ENST00000554956	ZNRF2	Q8NHG8	242 aa		3.4	□□□□□ -1.87
PSMC6-208	ENST00000554956	DTD1	Q8TEA8	209 aa		3.4	□□□□□ -1.87
PSMC6-208	ENST00000554956	MUC4	Q99102	2169 aa		3.4	□□□□□ -1.87
PSMC6-208	ENST00000554956	RFNG	Q9Y644	331 aa		3.4	□□□□□ -1.87
PSMC6-208	ENST00000554956	TRAV12-2	A0A075B6T6	113 aa		3.39	□□□□□ -1.87
PSMC6-208	ENST00000554956	TMEM189	A5PLL7	270 aa		3.39	□□□□□ -1.87
PSMC6-208	ENST00000554956	ZFP92	A6NM28	416 aa		3.39	□□□□□ -1.87
PSMC6-208	ENST00000554956	C16orf90	A8MZG2	172 aa		3.39	□□□□□ -1.87
PSMC6-208	ENST00000554956	GABARAP	H6UMI1	98 aa		3.39	□□□□□ -1.87
PSMC6-208	ENST00000554956	GSTZ1	O43708	216 aa	Predicted RBP	3.39	□□□□□ -1.87
PSMC6-208	ENST00000554956	PITX3	O75364	302 aa		3.39	□□□□□ -1.87
PSMC6-208	ENST00000554956	TNFAIP8	O95379	198 aa		3.39	□□□□□ -1.87
PSMC6-208	ENST00000554956	SULT1A3	P0DMM9	295 aa		3.39	□□□□□ -1.87
PSMC6-208	ENST00000554956	SULT1A4	P0DMN0	295 aa		3.39	□□□□□ -1.87
PSMC6-208	ENST00000554956	DEFB130B	P0DP73	79 aa		3.39	□□□□□ -1.87
PSMC6-208	ENST00000554956	DEFB130A	P0DP74	79 aa		3.39	□□□□□ -1.87
PSMC6-208	ENST00000554956	IAPP	P10997	89 aa		3.39	□□□□□ -1.87
PSMC6-208	ENST00000554956	PSMB3	P49720	205 aa		3.39	□□□□□ -1.87
PSMC6-208	ENST00000554956	DAD1	P61803	113 aa		3.39	□□□□□ -1.87
PSMC6-208	ENST00000554956	SMCO1	Q147U7	214 aa		3.39	□□□□□ -1.87
PSMC6-208	ENST00000554956	SURF2	Q15527	256 aa	Predicted RBP	3.39	□□□□□ -1.87
PSMC6-208	ENST00000554956	SPINK13	Q1W4C9	94 aa		3.39	□□□□□ -1.87
PSMC6-208	ENST00000554956	RRN3P1	Q2M238	152 aa		3.39	□□□□□ -1.87
PSMC6-208	ENST00000554956	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		3.39	□□□□□ -1.87

Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms