RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 OR8I2Q8N0Y5 310 aa0.66□□□□□ -2.3
SCFD1-213ENST00000554776 OR5A2Q8NGI9 324 aa0.66□□□□□ -2.3
SCFD1-213ENST00000554776 NAT14Q8WUY8 206 aa0.66□□□□□ -2.3
SCFD1-213ENST00000554776 AP1S3Q96PC3 154 aa0.66□□□□□ -2.3
SCFD1-213ENST00000554776 HSPB11Q9Y547 144 aa0.66□□□□□ -2.3
SCFD1-213ENST00000554776 FBN2P35556 2912 aa0.66□□□□□ -2.3
SCFD1-213ENST00000554776 MUC16Q8WXI7 14507 aa0.66□□□□□ -2.3
SCFD1-213ENST00000554776 KIAA1549LQ6ZVL6 1849 aa0.66□□□□□ -2.3
SCFD1-213ENST00000554776 CTTNBP2Q8WZ74 1663 aa0.65□□□□□ -2.3
SCFD1-213ENST00000554776 TRPM7Q96QT4 1865 aa0.65□□□□□ -2.3
SCFD1-213ENST00000554776 TRAV36DV7A0A075B6V5 113 aa0.65□□□□□ -2.31
SCFD1-213ENST00000554776 A0A0J9YY99 117 aa0.65□□□□□ -2.31
SCFD1-213ENST00000554776 TRBV30A0A0K0K1B3 111 aa0.65□□□□□ -2.31
SCFD1-213ENST00000554776 ARL5CA6NH57 179 aa0.65□□□□□ -2.31
SCFD1-213ENST00000554776 SULT1C4O75897 302 aa0.65□□□□□ -2.31
SCFD1-213ENST00000554776 PRB4P10163 310 aaPredicted RBP0.65□□□□□ -2.31
SCFD1-213ENST00000554776 SRP9P49458 86 aaKnown RBP0.65□□□□□ -2.31
SCFD1-213ENST00000554776 SNRPD3P62318 126 aaKnown RBP0.65□□□□□ -2.31
SCFD1-213ENST00000554776 Q5XG85 94 aa0.65□□□□□ -2.31
SCFD1-213ENST00000554776 Q6ZQY7 126 aa0.65□□□□□ -2.31
SCFD1-213ENST00000554776 C3orf62Q6ZUJ4 267 aa0.65□□□□□ -2.31
SCFD1-213ENST00000554776 OTOSQ8NHW6 89 aa0.65□□□□□ -2.31
SCFD1-213ENST00000554776 COMMD3Q9UBI1 195 aa0.65□□□□□ -2.31
SCFD1-213ENST00000554776 MPC1Q9Y5U8 109 aa0.65□□□□□ -2.31
SCFD1-213ENST00000554776 NOTCH1P46531 2555 aa0.65□□□□□ -2.31
SCFD1-213ENST00000554776 SPTBP11277 2137 aa0.65□□□□□ -2.31
SCFD1-213ENST00000554776 ZNF469Q96JG9 3925 aaPredicted RBP0.65□□□□□ -2.31
SCFD1-213ENST00000554776 ZDBF2Q9HCK1 2354 aa0.64□□□□□ -2.31
SCFD1-213ENST00000554776 MYH1P12882 1939 aa0.64□□□□□ -2.31
SCFD1-213ENST00000554776 A0A1B0GW64 132 aa0.64□□□□□ -2.31
SCFD1-213ENST00000554776 A0A1W2PPB8 328 aa0.64□□□□□ -2.31
SCFD1-213ENST00000554776 A0A1W2PRS3 328 aa0.64□□□□□ -2.31
SCFD1-213ENST00000554776 KIR3DP1A8MWS1 328 aa0.64□□□□□ -2.31
SCFD1-213ENST00000554776 DEGS1O15121 323 aa0.64□□□□□ -2.31
SCFD1-213ENST00000554776 DPM2O94777 84 aa0.64□□□□□ -2.31
SCFD1-213ENST00000554776 IGKCP01834 107 aa0.64□□□□□ -2.31
SCFD1-213ENST00000554776 IL7P13232 177 aa0.64□□□□□ -2.31
SCFD1-213ENST00000554776 CMPK1P30085 196 aa0.64□□□□□ -2.31
SCFD1-213ENST00000554776 CKS2P33552 79 aa0.64□□□□□ -2.31
SCFD1-213ENST00000554776 PCBD1P61457 104 aa0.64□□□□□ -2.31
SCFD1-213ENST00000554776 IQCJQ1A5X6 159 aa0.64□□□□□ -2.31
SCFD1-213ENST00000554776 HSD17B12Q53GQ0 312 aa0.64□□□□□ -2.31
SCFD1-213ENST00000554776 IZUMO2Q6UXV1 221 aa0.64□□□□□ -2.31
SCFD1-213ENST00000554776 TCTEX1D1Q8N7M0 179 aa0.64□□□□□ -2.31
SCFD1-213ENST00000554776 CCL19Q99731 98 aa0.64□□□□□ -2.31
SCFD1-213ENST00000554776 KDM5CP41229 1560 aa0.64□□□□□ -2.31
SCFD1-213ENST00000554776 UNC13AQ9UPW8 1703 aa0.64□□□□□ -2.31
SCFD1-213ENST00000554776 MED23Q9ULK4 1368 aa0.63□□□□□ -2.31
SCFD1-213ENST00000554776 TNFSF15O95150 251 aa0.63□□□□□ -2.31
SCFD1-213ENST00000554776 PAEPP09466 180 aa0.63□□□□□ -2.31
SCFD1-213ENST00000554776 ETV6P41212 452 aa0.63□□□□□ -2.31
SCFD1-213ENST00000554776 PSPHP78330 225 aa0.63□□□□□ -2.31
SCFD1-213ENST00000554776 SMIM7Q9BQ49 75 aa0.63□□□□□ -2.31
SCFD1-213ENST00000554776 CALML5Q9NZT1 146 aa0.63□□□□□ -2.31
SCFD1-213ENST00000554776 ZNF462Q96JM2 2506 aa0.62□□□□□ -2.31
SCFD1-213ENST00000554776 IGHV1-24A0A0C4DH33 117 aa0.62□□□□□ -2.31
SCFD1-213ENST00000554776 C9JAW5 83 aa0.62□□□□□ -2.31
SCFD1-213ENST00000554776 UQCRQO14949 82 aa0.62□□□□□ -2.31
SCFD1-213ENST00000554776 CCL4P13236 92 aa0.62□□□□□ -2.31
SCFD1-213ENST00000554776 SPINT3P49223 89 aa0.62□□□□□ -2.31
SCFD1-213ENST00000554776 DNAJB13P59910 316 aa0.62□□□□□ -2.31
SCFD1-213ENST00000554776 LSM3P62310 102 aaKnown RBP0.62□□□□□ -2.31
SCFD1-213ENST00000554776 RPS28P62857 69 aaKnown RBP0.62□□□□□ -2.31
SCFD1-213ENST00000554776 TMEM244Q5VVB8 128 aa0.62□□□□□ -2.31
SCFD1-213ENST00000554776 OR8J3Q8NGG0 315 aa0.62□□□□□ -2.31
SCFD1-213ENST00000554776 BANF2Q9H503 90 aa0.62□□□□□ -2.31
SCFD1-213ENST00000554776 HIGD1AQ9Y241 93 aa0.62□□□□□ -2.31
SCFD1-213ENST00000554776 LOC101927531A0A1B0GV80 90 aa0.61□□□□□ -2.31
SCFD1-213ENST00000554776 A0A1B0GX51 115 aa0.61□□□□□ -2.31
SCFD1-213ENST00000554776 TMEM189A5PLL7 270 aa0.61□□□□□ -2.31
SCFD1-213ENST00000554776 IFITM5A6NNB3 132 aa0.61□□□□□ -2.31
SCFD1-213ENST00000554776 IGHV3-30P01768 117 aa0.61□□□□□ -2.31
SCFD1-213ENST00000554776 TFF1P04155 84 aa0.61□□□□□ -2.31
SCFD1-213ENST00000554776 IGHV3-30-5P0DP03 117 aa0.61□□□□□ -2.31
SCFD1-213ENST00000554776 MRPL36Q9P0J6 103 aaKnown RBP0.61□□□□□ -2.31
SCFD1-213ENST00000554776 JPT1Q9UK76 154 aa0.61□□□□□ -2.31
SCFD1-213ENST00000554776 TMEM30CPA0ZSE6 113 aa0.6□□□□□ -2.31
SCFD1-213ENST00000554776 K7EIL1 84 aa0.6□□□□□ -2.31
SCFD1-213ENST00000554776 CCDC153Q494R4 210 aa0.6□□□□□ -2.31
SCFD1-213ENST00000554776 LYPD5Q6UWN5 251 aa0.6□□□□□ -2.31
SCFD1-213ENST00000554776 TCTE3Q8IZS6 198 aa0.6□□□□□ -2.31
SCFD1-213ENST00000554776 C10orf111Q8N326 155 aa0.6□□□□□ -2.31
SCFD1-213ENST00000554776 PLAC4Q8WY50 150 aa0.6□□□□□ -2.31
SCFD1-213ENST00000554776 LRP5O75197 1615 aa0.6□□□□□ -2.31
SCFD1-213ENST00000554776 ARHGAP31Q2M1Z3 1444 aa0.59□□□□□ -2.31
SCFD1-213ENST00000554776 A6NN06 94 aa0.59□□□□□ -2.31
SCFD1-213ENST00000554776 TPST1O60507 370 aa0.59□□□□□ -2.31
SCFD1-213ENST00000554776 LY6G6CO95867 125 aa0.59□□□□□ -2.31
SCFD1-213ENST00000554776 OR2H2O95918 312 aa0.59□□□□□ -2.31
SCFD1-213ENST00000554776 CD3DP04234 171 aa0.59□□□□□ -2.31
SCFD1-213ENST00000554776 GYPBP06028 91 aa0.59□□□□□ -2.31
SCFD1-213ENST00000554776 HIST1H1BP16401 226 aaKnown RBP0.59□□□□□ -2.31
SCFD1-213ENST00000554776 ADCYAP1P18509 176 aa0.59□□□□□ -2.31
SCFD1-213ENST00000554776 CAV3P56539 151 aa0.59□□□□□ -2.31
SCFD1-213ENST00000554776 FXYD3Q14802 87 aa0.59□□□□□ -2.31
SCFD1-213ENST00000554776 C6orf52Q5T4I8 152 aa0.59□□□□□ -2.31
SCFD1-213ENST00000554776 XAF1Q6GPH4 301 aa0.59□□□□□ -2.31
SCFD1-213ENST00000554776 IDO2Q6ZQW0 420 aa0.59□□□□□ -2.31
SCFD1-213ENST00000554776 Q6ZS92 163 aa0.59□□□□□ -2.31
SCFD1-213ENST00000554776 PYDC1Q8WXC3 89 aa0.59□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms