RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 H3BRM9 83 aa4.62□□□□□ -1.67
VPS33B-203ENST00000554264 TAX1BP3O14907 124 aa4.62□□□□□ -1.67
VPS33B-203ENST00000554264 MOSP00540 346 aa4.62□□□□□ -1.67
VPS33B-203ENST00000554264 CA1P00915 261 aaPredicted RBP4.62□□□□□ -1.67
VPS33B-203ENST00000554264 IGLV2-23P01705 113 aa4.62□□□□□ -1.67
VPS33B-203ENST00000554264 FRMD6-AS1P0C7T7 363 aa4.62□□□□□ -1.67
VPS33B-203ENST00000554264 PPIAL4FP0DN26 164 aa4.62□□□□□ -1.67
VPS33B-203ENST00000554264 PSG9Q00887 426 aa4.62□□□□□ -1.67
VPS33B-203ENST00000554264 SCGB2A2Q13296 93 aa4.62□□□□□ -1.67
VPS33B-203ENST00000554264 MPV17L2Q567V2 206 aa4.62□□□□□ -1.67
VPS33B-203ENST00000554264 OCIAD2Q56VL3 154 aa4.62□□□□□ -1.67
VPS33B-203ENST00000554264 GDF5OSQ5U4N7 250 aa4.62□□□□□ -1.67
VPS33B-203ENST00000554264 MORN5Q5VZ52 161 aa4.62□□□□□ -1.67
VPS33B-203ENST00000554264 BOD1L2Q8IYS8 172 aa4.62□□□□□ -1.67
VPS33B-203ENST00000554264 OR1B1Q8NGR6 318 aa4.62□□□□□ -1.67
VPS33B-203ENST00000554264 CCL13Q99616 98 aa4.62□□□□□ -1.67
VPS33B-203ENST00000554264 SLC25A39Q9BZJ4 359 aaPredicted RBP4.62□□□□□ -1.67
VPS33B-203ENST00000554264 CST9LQ9H4G1 147 aa4.62□□□□□ -1.67
VPS33B-203ENST00000554264 FNDC4Q9H6D8 234 aaPredicted RBP4.62□□□□□ -1.67
VPS33B-203ENST00000554264 SMPXQ9UHP9 88 aa4.62□□□□□ -1.67
VPS33B-203ENST00000554264 RABAC1Q9UI14 185 aa4.62□□□□□ -1.67
VPS33B-203ENST00000554264 FZR1Q9UM11 496 aa4.62□□□□□ -1.67
VPS33B-203ENST00000554264 PPIAL4AQ9Y536 164 aa4.62□□□□□ -1.67
VPS33B-203ENST00000554264 F11RQ9Y624 299 aaKnown RBP4.62□□□□□ -1.67
VPS33B-203ENST00000554264 HEATR1Q9H583 2144 aaKnown RBP4.61□□□□□ -1.67
VPS33B-203ENST00000554264 IGHV4-61A0A0C4DH41 118 aa4.61□□□□□ -1.67
VPS33B-203ENST00000554264 A0A1W2PPI3 338 aa4.61□□□□□ -1.67
VPS33B-203ENST00000554264 TMEM89A2RUT3 159 aa4.61□□□□□ -1.67
VPS33B-203ENST00000554264 SH2D7A6NKC9 451 aaPredicted RBP4.61□□□□□ -1.67
VPS33B-203ENST00000554264 C17orf100A8MU93 164 aa4.61□□□□□ -1.67
VPS33B-203ENST00000554264 ZNF207O43670 478 aaKnown RBP4.61□□□□□ -1.67
VPS33B-203ENST00000554264 APOHP02749 345 aaPredicted RBP4.61□□□□□ -1.67
VPS33B-203ENST00000554264 TFF1P04155 84 aa4.61□□□□□ -1.67
VPS33B-203ENST00000554264 ORM2P19652 201 aa4.61□□□□□ -1.67
VPS33B-203ENST00000554264 GATA2P23769 480 aaPredicted RBP4.61□□□□□ -1.67
VPS33B-203ENST00000554264 BMI1P35226 326 aa4.61□□□□□ -1.67
VPS33B-203ENST00000554264 RAB9AP51151 201 aa4.61□□□□□ -1.67
VPS33B-203ENST00000554264 TMEM155Q4W5P6 130 aa4.61□□□□□ -1.67
VPS33B-203ENST00000554264 TMEM97Q5BJF2 176 aa4.61□□□□□ -1.67
VPS33B-203ENST00000554264 LCN12Q6JVE5 192 aa4.61□□□□□ -1.67
VPS33B-203ENST00000554264 ATOH7Q8N100 152 aa4.61□□□□□ -1.67
VPS33B-203ENST00000554264 ORMDL3Q8N138 153 aa4.61□□□□□ -1.67
VPS33B-203ENST00000554264 FAM216BQ8N7L0 139 aa4.61□□□□□ -1.67
VPS33B-203ENST00000554264 OR10W1Q8NGF6 305 aa4.61□□□□□ -1.67
VPS33B-203ENST00000554264 PRSS3P2Q8NHM4 247 aa4.61□□□□□ -1.67
VPS33B-203ENST00000554264 RNASE8Q8TDE3 154 aaKnown RBP4.61□□□□□ -1.67
VPS33B-203ENST00000554264 GTSF1Q8WW33 167 aa4.61□□□□□ -1.67
VPS33B-203ENST00000554264 LEAP2Q969E1 77 aa4.61□□□□□ -1.67
VPS33B-203ENST00000554264 RPL36ALQ969Q0 106 aaKnown RBP4.61□□□□□ -1.67
VPS33B-203ENST00000554264 URB1-AS1Q96HZ7 61 aa4.61□□□□□ -1.67
VPS33B-203ENST00000554264 PGLYRP4Q96LB8 373 aa4.61□□□□□ -1.67
VPS33B-203ENST00000554264 RASL11BQ9BPW5 248 aa4.61□□□□□ -1.67
VPS33B-203ENST00000554264 VPS25Q9BRG1 176 aa4.61□□□□□ -1.67
VPS33B-203ENST00000554264 SHANK2-AS3Q9BTD1 123 aa4.61□□□□□ -1.67
VPS33B-203ENST00000554264 AAMDCQ9H7C9 122 aa4.61□□□□□ -1.67
VPS33B-203ENST00000554264 HIGD1BQ9P298 99 aa4.61□□□□□ -1.67
VPS33B-203ENST00000554264 U3KQK5 164 aa4.61□□□□□ -1.67
VPS33B-203ENST00000554264 TRBV19A0A075B6N1 114 aa4.6□□□□□ -1.67
VPS33B-203ENST00000554264 GAGE10A6NGK3 116 aa4.6□□□□□ -1.67
VPS33B-203ENST00000554264 LINC01546A6NGU7 62 aa4.6□□□□□ -1.67
VPS33B-203ENST00000554264 TMEM178BH3BS89 294 aa4.6□□□□□ -1.67
VPS33B-203ENST00000554264 J3QR89 54 aa4.6□□□□□ -1.67
VPS33B-203ENST00000554264 LY6HO94772 140 aa4.6□□□□□ -1.67
VPS33B-203ENST00000554264 HBDP02042 147 aa4.6□□□□□ -1.67
VPS33B-203ENST00000554264 CRYGBP07316 175 aa4.6□□□□□ -1.67
VPS33B-203ENST00000554264 SCGB1A1P11684 91 aa4.6□□□□□ -1.67
VPS33B-203ENST00000554264 GNG5P63218 68 aa4.6□□□□□ -1.67
VPS33B-203ENST00000554264 PSG3Q16557 428 aa4.6□□□□□ -1.67
VPS33B-203ENST00000554264 MOB3BQ86TA1 216 aa4.6□□□□□ -1.67
VPS33B-203ENST00000554264 PPP1R27Q86WC6 154 aa4.6□□□□□ -1.67
VPS33B-203ENST00000554264 ZNF418Q8TF45 676 aaPredicted RBP4.6□□□□□ -1.67
VPS33B-203ENST00000554264 BLNKQ8WV28 456 aa4.6□□□□□ -1.67
VPS33B-203ENST00000554264 LINC00479Q96M42 142 aa4.6□□□□□ -1.67
VPS33B-203ENST00000554264 BPESC1Q9GZL8 116 aa4.6□□□□□ -1.67
VPS33B-203ENST00000554264 TMEM133Q9H2Q1 129 aa4.6□□□□□ -1.67
VPS33B-203ENST00000554264 CLEC5AQ9NY25 188 aa4.6□□□□□ -1.67
VPS33B-203ENST00000554264 PRR14LQ5THK1 2151 aa4.6□□□□□ -1.67
VPS33B-203ENST00000554264 MUC21A0A0G2JKD1 596 aa4.59□□□□□ -1.67
VPS33B-203ENST00000554264 MUC21A0A140T8X8 626 aa4.59□□□□□ -1.67
VPS33B-203ENST00000554264 H3BRN7 92 aa4.59□□□□□ -1.67
VPS33B-203ENST00000554264 K7EP34 96 aa4.59□□□□□ -1.67
VPS33B-203ENST00000554264 TNFRSF13BO14836 293 aaPredicted RBP4.59□□□□□ -1.67
VPS33B-203ENST00000554264 SLC25A17O43808 307 aa4.59□□□□□ -1.67
VPS33B-203ENST00000554264 IGLV2-11P01706 119 aa4.59□□□□□ -1.67
VPS33B-203ENST00000554264 IGHV3-7P01780 117 aa4.59□□□□□ -1.67
VPS33B-203ENST00000554264 IGLC1P0CG04 106 aa4.59□□□□□ -1.67
VPS33B-203ENST00000554264 IGHV1-8P0DP01 117 aa4.59□□□□□ -1.67
VPS33B-203ENST00000554264 MYOD1P15172 320 aa4.59□□□□□ -1.67
VPS33B-203ENST00000554264 RPL7P18124 248 aaKnown RBP4.59□□□□□ -1.67
VPS33B-203ENST00000554264 GPR6P46095 362 aaPredicted RBP4.59□□□□□ -1.67
VPS33B-203ENST00000554264 DLX6P56179 175 aa4.59□□□□□ -1.67
VPS33B-203ENST00000554264 TAL2Q16559 108 aa4.59□□□□□ -1.67
VPS33B-203ENST00000554264 MUC21Q5SSG8 566 aa4.59□□□□□ -1.67
VPS33B-203ENST00000554264 LDLRAD2Q5SZI1 272 aa4.59□□□□□ -1.67
VPS33B-203ENST00000554264 MALRD1Q5VYJ5 2156 aa4.59□□□□□ -1.67
VPS33B-203ENST00000554264 ZNF841Q6ZN19 808 aa4.59□□□□□ -1.67
VPS33B-203ENST00000554264 TEX29Q8N6K0 151 aa4.59□□□□□ -1.67
VPS33B-203ENST00000554264 SRSF12Q8WXF0 261 aaKnown RBP4.59□□□□□ -1.67
VPS33B-203ENST00000554264 NXT2Q9NPJ8 142 aaKnown RBP4.59□□□□□ -1.67
VPS33B-203ENST00000554264 THYN1Q9P016 225 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms