RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 ATRAIDQ6UW56 229 aa5.67□□□□□ -1.5
TDP1-209ENST00000554180 ZFAND2AQ8N6M9 145 aa5.67□□□□□ -1.5
TDP1-209ENST00000554180 OR4B1Q8NGF8 309 aa5.67□□□□□ -1.5
TDP1-209ENST00000554180 OR10G8Q8NGN5 311 aa5.67□□□□□ -1.5
TDP1-209ENST00000554180 DAZAP1Q96EP5 407 aaKnown RBP5.67□□□□□ -1.5
TDP1-209ENST00000554180 C8orf49Q96NF6 230 aa5.67□□□□□ -1.5
TDP1-209ENST00000554180 MDFIQ99750 246 aa5.67□□□□□ -1.5
TDP1-209ENST00000554180 ASCL2Q99929 193 aa5.67□□□□□ -1.5
TDP1-209ENST00000554180 RPS10P5Q9NQ39 176 aa5.67□□□□□ -1.5
TDP1-209ENST00000554180 C19orf73Q9NVV2 129 aa5.67□□□□□ -1.5
TDP1-209ENST00000554180 AURKAIP1Q9NWT8 199 aaPredicted RBP5.67□□□□□ -1.5
TDP1-209ENST00000554180 FABP5P3A8MUU1 101 aa5.66□□□□□ -1.5
TDP1-209ENST00000554180 AMBPP02760 352 aa5.66□□□□□ -1.5
TDP1-209ENST00000554180 CD7P09564 240 aa5.66□□□□□ -1.5
TDP1-209ENST00000554180 PRB4P10163 310 aaPredicted RBP5.66□□□□□ -1.5
TDP1-209ENST00000554180 CDKN1BP46527 198 aa5.66□□□□□ -1.5
TDP1-209ENST00000554180 NUTF2P61970 127 aaKnown RBP5.66□□□□□ -1.5
TDP1-209ENST00000554180 EGFEM1PQ0D2K5 195 aa5.66□□□□□ -1.5
TDP1-209ENST00000554180 Q6AWC8 147 aa5.66□□□□□ -1.5
TDP1-209ENST00000554180 AMTNQ6UX39 209 aa5.66□□□□□ -1.5
TDP1-209ENST00000554180 STHQ8IWL8 128 aa5.66□□□□□ -1.5
TDP1-209ENST00000554180 NUDT10Q8NFP7 164 aa5.66□□□□□ -1.5
TDP1-209ENST00000554180 NUDT11Q96G61 164 aa5.66□□□□□ -1.5
TDP1-209ENST00000554180 IMMP2LQ96T52 175 aa5.66□□□□□ -1.5
TDP1-209ENST00000554180 TUBA4BQ9H853 241 aa5.66□□□□□ -1.5
TDP1-209ENST00000554180 V9GYV3 84 aa5.66□□□□□ -1.5
TDP1-209ENST00000554180 TRAV21A0A0B4J279 112 aa5.65□□□□□ -1.5
TDP1-209ENST00000554180 XKRY2A2RUG3 117 aa5.65□□□□□ -1.5
TDP1-209ENST00000554180 FAM231BA6NCW3 169 aa5.65□□□□□ -1.5
TDP1-209ENST00000554180 KNCNA6PVL3 124 aa5.65□□□□□ -1.5
TDP1-209ENST00000554180 ZNF705GA8MUZ8 300 aaPredicted RBP5.65□□□□□ -1.5
TDP1-209ENST00000554180 SH2D1AO60880 128 aa5.65□□□□□ -1.5
TDP1-209ENST00000554180 GPX1P07203 203 aa5.65□□□□□ -1.5
TDP1-209ENST00000554180 CRIP1P50238 77 aa5.65□□□□□ -1.5
TDP1-209ENST00000554180 LINC01559Q495D7 138 aa5.65□□□□□ -1.5
TDP1-209ENST00000554180 LINC00322Q6ZN03 302 aaPredicted RBP5.65□□□□□ -1.5
TDP1-209ENST00000554180 TRPT1Q86TN4 253 aaKnown RBP5.65□□□□□ -1.5
TDP1-209ENST00000554180 RNASE7Q9H1E1 156 aaKnown RBP5.65□□□□□ -1.5
TDP1-209ENST00000554180 RPP21Q9H633 154 aaKnown RBP5.65□□□□□ -1.5
TDP1-209ENST00000554180 SMCO4Q9NRQ5 59 aa5.65□□□□□ -1.5
TDP1-209ENST00000554180 PKD1L1Q8TDX9 2849 aa5.65□□□□□ -1.51
TDP1-209ENST00000554180 TRAV9-1A0A075B6T8 112 aa5.64□□□□□ -1.51
TDP1-209ENST00000554180 C7orf71A4D174 169 aa5.64□□□□□ -1.51
TDP1-209ENST00000554180 A8MWL6 223 aa5.64□□□□□ -1.51
TDP1-209ENST00000554180 GATCO43716 136 aaKnown RBP5.64□□□□□ -1.51
TDP1-209ENST00000554180 CXCL1P09341 107 aa5.64□□□□□ -1.51
TDP1-209ENST00000554180 S100PP25815 95 aa5.64□□□□□ -1.51
TDP1-209ENST00000554180 ZNF80P51504 273 aaPredicted RBP5.64□□□□□ -1.51
TDP1-209ENST00000554180 RPS20P60866 119 aaKnown RBP5.64□□□□□ -1.51
TDP1-209ENST00000554180 ZNF124Q15973 351 aa5.64□□□□□ -1.51
TDP1-209ENST00000554180 PRR9Q5T870 116 aa5.64□□□□□ -1.51
TDP1-209ENST00000554180 KCNIP4Q6PIL6 250 aa5.64□□□□□ -1.51
TDP1-209ENST00000554180 TSKUQ8WUA8 353 aa5.64□□□□□ -1.51
TDP1-209ENST00000554180 BTF3L4Q96K17 158 aa5.64□□□□□ -1.51
TDP1-209ENST00000554180 C20orf144Q9BQM9 153 aa5.64□□□□□ -1.51
TDP1-209ENST00000554180 GFRA4Q9GZZ7 299 aa5.64□□□□□ -1.51
TDP1-209ENST00000554180 IL36BQ9NZH7 164 aa5.64□□□□□ -1.51
TDP1-209ENST00000554180 NBEAL1Q6ZS30 2694 aa5.63□□□□□ -1.51
TDP1-209ENST00000554180 SMIM27A0A1W2PRY6 76 aa5.63□□□□□ -1.51
TDP1-209ENST00000554180 TMEM189A5PLL7 270 aa5.63□□□□□ -1.51
TDP1-209ENST00000554180 RBMY1BA6NDE4 496 aaKnown RBP5.63□□□□□ -1.51
TDP1-209ENST00000554180 RBMY1EA6NEQ0 496 aaKnown RBP5.63□□□□□ -1.51
TDP1-209ENST00000554180 M0R2Z0 102 aa5.63□□□□□ -1.51
TDP1-209ENST00000554180 SCO1O75880 301 aa5.63□□□□□ -1.51
TDP1-209ENST00000554180 IGKV3-20P01619 116 aa5.63□□□□□ -1.51
TDP1-209ENST00000554180 RBMY1DP0C7P1 496 aaKnown RBP5.63□□□□□ -1.51
TDP1-209ENST00000554180 RNASE4P34096 147 aaKnown RBP5.63□□□□□ -1.51
TDP1-209ENST00000554180 BTN1A1Q13410 526 aa5.63□□□□□ -1.51
TDP1-209ENST00000554180 SPINK13Q1W4C9 94 aa5.63□□□□□ -1.51
TDP1-209ENST00000554180 TDRG1Q3Y452 100 aa5.63□□□□□ -1.51
TDP1-209ENST00000554180 SAMD5Q5TGI4 173 aa5.63□□□□□ -1.51
TDP1-209ENST00000554180 GFI1BQ5VTD9 330 aa5.63□□□□□ -1.51
TDP1-209ENST00000554180 MORN3Q6PF18 240 aaPredicted RBP5.63□□□□□ -1.51
TDP1-209ENST00000554180 CBLN2Q8IUK8 224 aa5.63□□□□□ -1.51
TDP1-209ENST00000554180 OR2D3Q8NGH3 330 aa5.63□□□□□ -1.51
TDP1-209ENST00000554180 C1QTNF4Q9BXJ3 329 aa5.63□□□□□ -1.51
TDP1-209ENST00000554180 NOTCH1P46531 2555 aa5.63□□□□□ -1.51
TDP1-209ENST00000554180 A0A1W2PPQ1 181 aa5.62□□□□□ -1.51
TDP1-209ENST00000554180 CRXO43186 299 aaPredicted RBP5.62□□□□□ -1.51
TDP1-209ENST00000554180 ZNF324O75467 553 aaPredicted RBP5.62□□□□□ -1.51
TDP1-209ENST00000554180 INSP01308 110 aa5.62□□□□□ -1.51
TDP1-209ENST00000554180 ORM1P02763 201 aa5.62□□□□□ -1.51
TDP1-209ENST00000554180 FOXA3P55318 350 aaPredicted RBP5.62□□□□□ -1.51
TDP1-209ENST00000554180 RPL19P84098 196 aaKnown RBP5.62□□□□□ -1.51
TDP1-209ENST00000554180 OXLD1Q5BKU9 147 aa5.62□□□□□ -1.51
TDP1-209ENST00000554180 TMEM88Q6PEY1 159 aa5.62□□□□□ -1.51
TDP1-209ENST00000554180 Q8N1Y9 231 aa5.62□□□□□ -1.51
TDP1-209ENST00000554180 DEFB125Q8N687 156 aa5.62□□□□□ -1.51
TDP1-209ENST00000554180 KCNS1Q96KK3 526 aa5.62□□□□□ -1.51
TDP1-209ENST00000554180 WFDC10AQ9H1F0 79 aa5.62□□□□□ -1.51
TDP1-209ENST00000554180 SRD5A3Q9H8P0 318 aa5.62□□□□□ -1.51
TDP1-209ENST00000554180 NAT8BQ9UHF3 227 aa5.62□□□□□ -1.51
TDP1-209ENST00000554180 TRBV24-1A0A075B6N3 115 aa5.61□□□□□ -1.51
TDP1-209ENST00000554180 TRAV12-2A0A075B6T6 113 aa5.61□□□□□ -1.51
TDP1-209ENST00000554180 TRAV12-3A0A0B4J271 114 aa5.61□□□□□ -1.51
TDP1-209ENST00000554180 IGKV3D-20A0A0C4DH25 116 aa5.61□□□□□ -1.51
TDP1-209ENST00000554180 KIR2DL5BA0A0G2JN68 375 aa5.61□□□□□ -1.51
TDP1-209ENST00000554180 KIR2DL5BA0A0G2JPC4 375 aa5.61□□□□□ -1.51
TDP1-209ENST00000554180 HIGD1CA8MV81 97 aa5.61□□□□□ -1.51
TDP1-209ENST00000554180 J3KRW8 73 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms