RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 C1orf158Q8N1D5 194 aa1.56□□□□□ -2.16
SCFD1-210ENST00000553693 OR8B3Q8NGG8 313 aa1.56□□□□□ -2.16
SCFD1-210ENST00000553693 SLC25A40Q8TBP6 338 aa1.56□□□□□ -2.16
SCFD1-210ENST00000553693 UPK3BQ9BT76 320 aa1.56□□□□□ -2.16
SCFD1-210ENST00000553693 OR2J1Q9GZK6 312 aa1.56□□□□□ -2.16
SCFD1-210ENST00000553693 NDUFB11Q9NX14 153 aa1.56□□□□□ -2.16
SCFD1-210ENST00000553693 SLC35A3Q9Y2D2 325 aa1.56□□□□□ -2.16
SCFD1-210ENST00000553693 MINOS1-NBL1R4GNA1 71 aa1.56□□□□□ -2.16
SCFD1-210ENST00000553693 DSCAML1Q8TD84 2053 aa1.55□□□□□ -2.16
SCFD1-210ENST00000553693 DNAH10Q8IVF4 4471 aa1.55□□□□□ -2.16
SCFD1-210ENST00000553693 TRAV9-1A0A075B6T8 112 aa1.55□□□□□ -2.16
SCFD1-210ENST00000553693 A0A1W2PNN7 141 aa1.55□□□□□ -2.16
SCFD1-210ENST00000553693 IRGMA1A4Y4 181 aa1.55□□□□□ -2.16
SCFD1-210ENST00000553693 C19orf71A6NCJ1 209 aa1.55□□□□□ -2.16
SCFD1-210ENST00000553693 GGT3PA6NGU5 568 aa1.55□□□□□ -2.16
SCFD1-210ENST00000553693 ZNF878C9JN71 531 aa1.55□□□□□ -2.16
SCFD1-210ENST00000553693 FNDC10F2Z333 226 aa1.55□□□□□ -2.16
SCFD1-210ENST00000553693 PGRMC1O00264 195 aaKnown RBP1.55□□□□□ -2.16
SCFD1-210ENST00000553693 LST1O00453 97 aa1.55□□□□□ -2.16
SCFD1-210ENST00000553693 FAAHO00519 579 aa1.55□□□□□ -2.16
SCFD1-210ENST00000553693 NPFFO15130 113 aa1.55□□□□□ -2.16
SCFD1-210ENST00000553693 OR7C1O76099 320 aaPredicted RBP1.55□□□□□ -2.16
SCFD1-210ENST00000553693 IFNA10P01566 189 aa1.55□□□□□ -2.16
SCFD1-210ENST00000553693 BPGMP07738 259 aa1.55□□□□□ -2.16
SCFD1-210ENST00000553693 LINC00032P0C843 101 aa1.55□□□□□ -2.16
SCFD1-210ENST00000553693 RPL5P46777 297 aaKnown RBP1.55□□□□□ -2.16
SCFD1-210ENST00000553693 RBM11P57052 281 aaKnown RBP1.55□□□□□ -2.16
SCFD1-210ENST00000553693 TMEM258P61165 79 aa1.55□□□□□ -2.16
SCFD1-210ENST00000553693 ERHP84090 104 aaKnown RBP1.55□□□□□ -2.16
SCFD1-210ENST00000553693 DR1Q01658 176 aa1.55□□□□□ -2.16
SCFD1-210ENST00000553693 KLRD1Q13241 179 aa1.55□□□□□ -2.16
SCFD1-210ENST00000553693 MIAQ16674 131 aa1.55□□□□□ -2.16
SCFD1-210ENST00000553693 FAM229BQ4G0N7 80 aa1.55□□□□□ -2.16
SCFD1-210ENST00000553693 PABPC1L2AQ5JQF8 200 aa1.55□□□□□ -2.16
SCFD1-210ENST00000553693 RPL22L1Q6P5R6 122 aaKnown RBP1.55□□□□□ -2.16
SCFD1-210ENST00000553693 Q6ZS49 121 aa1.55□□□□□ -2.16
SCFD1-210ENST00000553693 ZCCHC23Q6ZST2 131 aa1.55□□□□□ -2.16
SCFD1-210ENST00000553693 ZNF767PQ75MW2 155 aa1.55□□□□□ -2.16
SCFD1-210ENST00000553693 VMO1Q7Z5L0 202 aa1.55□□□□□ -2.16
SCFD1-210ENST00000553693 CLECL1Q8IZS7 167 aa1.55□□□□□ -2.16
SCFD1-210ENST00000553693 Q8N2B8 174 aa1.55□□□□□ -2.16
SCFD1-210ENST00000553693 SLC35F6Q8N357 371 aa1.55□□□□□ -2.16
SCFD1-210ENST00000553693 GNPDA2Q8TDQ7 276 aa1.55□□□□□ -2.16
SCFD1-210ENST00000553693 MRPL57Q9BQC6 102 aaKnown RBP1.55□□□□□ -2.16
SCFD1-210ENST00000553693 GINS4Q9BRT9 223 aa1.55□□□□□ -2.16
SCFD1-210ENST00000553693 C9orf16Q9BUW7 83 aa1.55□□□□□ -2.16
SCFD1-210ENST00000553693 TMEM147Q9BVK8 224 aa1.55□□□□□ -2.16
SCFD1-210ENST00000553693 WDR61Q9GZS3 305 aaKnown RBP1.55□□□□□ -2.16
SCFD1-210ENST00000553693 TLNRD1Q9H1K6 362 aa1.55□□□□□ -2.16
SCFD1-210ENST00000553693 CMTM6Q9NX76 183 aa1.55□□□□□ -2.16
SCFD1-210ENST00000553693 NAT8Q9UHE5 227 aa1.55□□□□□ -2.16
SCFD1-210ENST00000553693 FUT9Q9Y231 359 aa1.55□□□□□ -2.16
SCFD1-210ENST00000553693 KLK5Q9Y337 293 aaPredicted RBP1.55□□□□□ -2.16
SCFD1-210ENST00000553693 TMEM56-RWDD3S4R434 201 aa1.55□□□□□ -2.16
SCFD1-210ENST00000553693 V9GYQ6 96 aa1.55□□□□□ -2.16
SCFD1-210ENST00000553693 TANC2Q9HCD6 1990 aa1.55□□□□□ -2.16
SCFD1-210ENST00000553693 IGKV1D-42A0A075B6H8 117 aa1.54□□□□□ -2.16
SCFD1-210ENST00000553693 IGLV10-54A0A075B6I4 117 aa1.54□□□□□ -2.16
SCFD1-210ENST00000553693 A0A1W2PNM2 257 aa1.54□□□□□ -2.16
SCFD1-210ENST00000553693 TCRBV4S1A1TA0A5B7 111 aa1.54□□□□□ -2.16
SCFD1-210ENST00000553693 C11orf86A6NJI1 115 aa1.54□□□□□ -2.16
SCFD1-210ENST00000553693 FABP5P3A8MUU1 101 aa1.54□□□□□ -2.16
SCFD1-210ENST00000553693 J3QRK9 145 aa1.54□□□□□ -2.16
SCFD1-210ENST00000553693 HMGN4O00479 90 aa1.54□□□□□ -2.16
SCFD1-210ENST00000553693 SLC22A1O15245 554 aa1.54□□□□□ -2.16
SCFD1-210ENST00000553693 GNRH2O43555 120 aa1.54□□□□□ -2.16
SCFD1-210ENST00000553693 HAND1O96004 215 aa1.54□□□□□ -2.16
SCFD1-210ENST00000553693 RPS4Y1P22090 263 aaKnown RBP1.54□□□□□ -2.16
SCFD1-210ENST00000553693 NFYAP23511 347 aaPredicted RBP1.54□□□□□ -2.16
SCFD1-210ENST00000553693 HIST1H2BOP23527 126 aa1.54□□□□□ -2.16
SCFD1-210ENST00000553693 S100A4P26447 101 aaKnown RBP1.54□□□□□ -2.16
SCFD1-210ENST00000553693 HIST1H2BBP33778 126 aa1.54□□□□□ -2.16
SCFD1-210ENST00000553693 EIF2B2P49770 351 aaKnown RBP1.54□□□□□ -2.16
SCFD1-210ENST00000553693 HIST1H2BDP58876 126 aa1.54□□□□□ -2.16
SCFD1-210ENST00000553693 VBP1P61758 197 aa1.54□□□□□ -2.16
SCFD1-210ENST00000553693 HIST1H2BCP62807 126 aa1.54□□□□□ -2.16
SCFD1-210ENST00000553693 BLCAPP62952 87 aa1.54□□□□□ -2.16
SCFD1-210ENST00000553693 RPL38P63173 70 aaKnown RBP1.54□□□□□ -2.16
SCFD1-210ENST00000553693 RPL19P84098 196 aaKnown RBP1.54□□□□□ -2.16
SCFD1-210ENST00000553693 HIST2H2BEQ16778 126 aa1.54□□□□□ -2.16
SCFD1-210ENST00000553693 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.54□□□□□ -2.16
SCFD1-210ENST00000553693 HCP5Q6MZN7 132 aa1.54□□□□□ -2.16
SCFD1-210ENST00000553693 C10orf99Q6UWK7 81 aa1.54□□□□□ -2.16
SCFD1-210ENST00000553693 C2orf91Q6ZV80 131 aa1.54□□□□□ -2.16
SCFD1-210ENST00000553693 TCF24Q7RTU0 167 aa1.54□□□□□ -2.16
SCFD1-210ENST00000553693 OR5AS1Q8N127 324 aa1.54□□□□□ -2.16
SCFD1-210ENST00000553693 DYNAPQ8N1N2 210 aa1.54□□□□□ -2.16
SCFD1-210ENST00000553693 C10orf111Q8N326 155 aa1.54□□□□□ -2.16
SCFD1-210ENST00000553693 LRRC18Q8N456 261 aa1.54□□□□□ -2.16
SCFD1-210ENST00000553693 ZNF676Q8N7Q3 588 aa1.54□□□□□ -2.16
SCFD1-210ENST00000553693 GDPD1Q8N9F7 314 aa1.54□□□□□ -2.16
SCFD1-210ENST00000553693 OR4X2Q8NGF9 303 aa1.54□□□□□ -2.16
SCFD1-210ENST00000553693 OR51A2Q8NGJ7 313 aa1.54□□□□□ -2.16
SCFD1-210ENST00000553693 OR2T4Q8NH00 348 aa1.54□□□□□ -2.16
SCFD1-210ENST00000553693 MRPL30Q8TCC3 161 aaKnown RBP1.54□□□□□ -2.16
SCFD1-210ENST00000553693 SMCR5Q8TEV8 140 aa1.54□□□□□ -2.16
SCFD1-210ENST00000553693 DNAJC9Q8WXX5 260 aa1.54□□□□□ -2.16
SCFD1-210ENST00000553693 SLC7A6Q92536 515 aa1.54□□□□□ -2.16
SCFD1-210ENST00000553693 AP3S1Q92572 193 aa1.54□□□□□ -2.16
SCFD1-210ENST00000553693 HIST1H2BHQ93079 126 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms