RNA–Protein interactions for RNA: ENST00000553426.1

LINC00643-202, long intergenic non-protein coding RNA 643, humanhuman

TSL 3 BASIC

Gene LINC00643, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-202ENST00000553426 KHDC3LQ587J8 217 aa8.82□□□□□ -1
LINC00643-202ENST00000553426 FFAR4Q5NUL3 377 aa8.82□□□□□ -1
LINC00643-202ENST00000553426 ZFAND2AQ8N6M9 145 aa8.82□□□□□ -1
LINC00643-202ENST00000553426 VSIG2Q96IQ7 327 aa8.82□□□□□ -1
LINC00643-202ENST00000553426 ICOSQ9Y6W8 199 aa8.82□□□□□ -1
LINC00643-202ENST00000553426 A0A096LPF7 62 aa8.81□□□□□ -1
LINC00643-202ENST00000553426 RBAKDNA6NC62 111 aa8.81□□□□□ -1
LINC00643-202ENST00000553426 H0YIZ8 118 aa8.81□□□□□ -1
LINC00643-202ENST00000553426 CDK2AP2O75956 126 aa8.81□□□□□ -1
LINC00643-202ENST00000553426 PHYHIPLQ96FC7 376 aa8.81□□□□□ -1
LINC00643-202ENST00000553426 PRO0255Q9UI72 69 aa8.81□□□□□ -1
LINC00643-202ENST00000553426 APOBP04114 4563 aaKnown RBP8.8□□□□□ -1
LINC00643-202ENST00000553426 SIVA1O15304 175 aa8.8□□□□□ -1
LINC00643-202ENST00000553426 MPC2O95563 127 aa8.8□□□□□ -1
LINC00643-202ENST00000553426 IGHV3-53P01767 116 aa8.8□□□□□ -1
LINC00643-202ENST00000553426 H2BFSP57053 126 aa8.8□□□□□ -1
LINC00643-202ENST00000553426 FAM74A1Q5RGS3 127 aa8.8□□□□□ -1
LINC00643-202ENST00000553426 PRR9Q5T870 116 aa8.8□□□□□ -1
LINC00643-202ENST00000553426 FAM159AQ6UWV7 190 aa8.8□□□□□ -1
LINC00643-202ENST00000553426 Q8TAT8 98 aa8.8□□□□□ -1
LINC00643-202ENST00000553426 MARVELD1Q9BSK0 173 aa8.8□□□□□ -1
LINC00643-202ENST00000553426 MRPL16Q9NX20 251 aaKnown RBP8.8□□□□□ -1
LINC00643-202ENST00000553426 TP53TG3Q9ULZ0 132 aa8.8□□□□□ -1
LINC00643-202ENST00000553426 HHLA3Q9XRX5 114 aa8.8□□□□□ -1
LINC00643-202ENST00000553426 HSPB11Q9Y547 144 aa8.8□□□□□ -1
LINC00643-202ENST00000553426 LENEPQ9Y5L5 61 aa8.8□□□□□ -1
LINC00643-202ENST00000553426 RPL12P30050 165 aaKnown RBP8.79□□□□□ -1
LINC00643-202ENST00000553426 ZNF266Q14584 549 aa8.79□□□□□ -1
LINC00643-202ENST00000553426 MRPL23Q16540 153 aaKnown RBP8.79□□□□□ -1
LINC00643-202ENST00000553426 MUC21Q5SSG8 566 aa8.79□□□□□ -1
LINC00643-202ENST00000553426 SPATA12Q7Z6I5 190 aa8.79□□□□□ -1
LINC00643-202ENST00000553426 CMTM2Q8TAZ6 248 aa8.79□□□□□ -1
LINC00643-202ENST00000553426 HYLS1Q96M11 299 aa8.79□□□□□ -1
LINC00643-202ENST00000553426 KRTAP1-5Q9BYS1 174 aa8.79□□□□□ -1
LINC00643-202ENST00000553426 SMIM3Q9BZL3 60 aa8.79□□□□□ -1
LINC00643-202ENST00000553426 PTTG2Q9NZH5 202 aa8.79□□□□□ -1
LINC00643-202ENST00000553426 TRGV11A0A075B6L2 103 aa8.78□□□□□ -1
LINC00643-202ENST00000553426 TRGV4A0A0C4DH28 118 aa8.78□□□□□ -1
LINC00643-202ENST00000553426 A0A1W2PPV4 95 aa8.78□□□□□ -1
LINC00643-202ENST00000553426 DIRC3C9JPN6 131 aa8.78□□□□□ -1
LINC00643-202ENST00000553426 IFITM3Q01628 133 aa8.78□□□□□ -1
LINC00643-202ENST00000553426 PCNPQ8WW12 178 aaKnown RBP8.78□□□□□ -1
LINC00643-202ENST00000553426 C8orf49Q96NF6 230 aa8.78□□□□□ -1
LINC00643-202ENST00000553426 SPXQ9BT56 116 aa8.78□□□□□ -1
LINC00643-202ENST00000553426 TRAV9-2A0A087WT02 112 aa8.77□□□□□ -1.01
LINC00643-202ENST00000553426 EREGO14944 169 aa8.77□□□□□ -1.01
LINC00643-202ENST00000553426 NXPH4O95158 308 aa8.77□□□□□ -1.01
LINC00643-202ENST00000553426 CRYBA4P53673 196 aa8.77□□□□□ -1.01
LINC00643-202ENST00000553426 ACOT6Q3I5F7 207 aaPredicted RBP8.77□□□□□ -1.01
LINC00643-202ENST00000553426 Q6AWC8 147 aa8.77□□□□□ -1.01
LINC00643-202ENST00000553426 Q6ZQT7 251 aa8.77□□□□□ -1.01
LINC00643-202ENST00000553426 TMED6Q8WW62 240 aa8.77□□□□□ -1.01
LINC00643-202ENST00000553426 OTORQ9NRC9 128 aa8.77□□□□□ -1.01
LINC00643-202ENST00000553426 MBD2Q9UBB5 411 aa8.77□□□□□ -1.01
LINC00643-202ENST00000553426 DNAH5Q8TE73 4624 aa8.76□□□□□ -1.01
LINC00643-202ENST00000553426 PGPA6NDG6 321 aa8.76□□□□□ -1.01
LINC00643-202ENST00000553426 SRIP30626 198 aa8.76□□□□□ -1.01
LINC00643-202ENST00000553426 LINC00315P59091 139 aa8.76□□□□□ -1.01
LINC00643-202ENST00000553426 FHL2Q14192 279 aa8.76□□□□□ -1.01
LINC00643-202ENST00000553426 TMEM183BQ1AE95 376 aa8.76□□□□□ -1.01
LINC00643-202ENST00000553426 PQLC2Q6ZP29 291 aa8.76□□□□□ -1.01
LINC00643-202ENST00000553426 NEGR1Q7Z3B1 354 aa8.76□□□□□ -1.01
LINC00643-202ENST00000553426 TMEM183AQ8IXX5 376 aa8.76□□□□□ -1.01
LINC00643-202ENST00000553426 MAPKAPK5-AS1Q8N8E1 139 aa8.76□□□□□ -1.01
LINC00643-202ENST00000553426 MDFICQ9P1T7 246 aa8.76□□□□□ -1.01
LINC00643-202ENST00000553426 NAGKQ9UJ70 344 aa8.76□□□□□ -1.01
LINC00643-202ENST00000553426 RPH3ALQ9UNE2 315 aa8.76□□□□□ -1.01
LINC00643-202ENST00000553426 ORM1P02763 201 aa8.75□□□□□ -1.01
LINC00643-202ENST00000553426 LYPD5Q6UWN5 251 aa8.75□□□□□ -1.01
LINC00643-202ENST00000553426 NFE4Q86UQ8 179 aa8.75□□□□□ -1.01
LINC00643-202ENST00000553426 IQCF2Q8IXL9 164 aa8.75□□□□□ -1.01
LINC00643-202ENST00000553426 ARL6IP6Q8N6S5 226 aa8.75□□□□□ -1.01
LINC00643-202ENST00000553426 RASL10AQ92737 203 aa8.75□□□□□ -1.01
LINC00643-202ENST00000553426 TRAV21A0A0B4J279 112 aa8.74□□□□□ -1.01
LINC00643-202ENST00000553426 A6NHS1 94 aa8.74□□□□□ -1.01
LINC00643-202ENST00000553426 K7EP13 123 aa8.74□□□□□ -1.01
LINC00643-202ENST00000553426 OR10G4Q8NGN3 311 aa8.74□□□□□ -1.01
LINC00643-202ENST00000553426 TXNDC17Q9BRA2 123 aa8.74□□□□□ -1.01
LINC00643-202ENST00000553426 LY96Q9Y6Y9 160 aa8.74□□□□□ -1.01
LINC00643-202ENST00000553426 C9JCJ5 164 aa8.73□□□□□ -1.01
LINC00643-202ENST00000553426 K7EQD1 137 aa8.73□□□□□ -1.01
LINC00643-202ENST00000553426 SFTA3P0C7M3 94 aa8.73□□□□□ -1.01
LINC00643-202ENST00000553426 GYPEP15421 78 aa8.73□□□□□ -1.01
LINC00643-202ENST00000553426 EVI2AP22794 236 aa8.73□□□□□ -1.01
LINC00643-202ENST00000553426 ERVFC1-1P60608 527 aa8.73□□□□□ -1.01
LINC00643-202ENST00000553426 TDRG1Q3Y452 100 aa8.73□□□□□ -1.01
LINC00643-202ENST00000553426 GOLT1AQ6ZVE7 132 aa8.73□□□□□ -1.01
LINC00643-202ENST00000553426 OR4C5Q8NGB2 326 aa8.73□□□□□ -1.01
LINC00643-202ENST00000553426 OR10G9Q8NGN4 311 aa8.73□□□□□ -1.01
LINC00643-202ENST00000553426 OR10G7Q8NGN6 311 aa8.73□□□□□ -1.01
LINC00643-202ENST00000553426 ZNF479Q96JC4 524 aa8.73□□□□□ -1.01
LINC00643-202ENST00000553426 KCNS1Q96KK3 526 aa8.73□□□□□ -1.01
LINC00643-202ENST00000553426 NDFIP1Q9BT67 221 aa8.73□□□□□ -1.01
LINC00643-202ENST00000553426 TREM1Q9NP99 234 aa8.73□□□□□ -1.01
LINC00643-202ENST00000553426 TRAV4A0A0B4J268 109 aa8.72□□□□□ -1.01
LINC00643-202ENST00000553426 K7EQM0 130 aa8.72□□□□□ -1.01
LINC00643-202ENST00000553426 M0R2P5 195 aa8.72□□□□□ -1.01
LINC00643-202ENST00000553426 EIF3GO75821 320 aaKnown RBP eCLIP8.72□□□□□ -1.01
LINC00643-202ENST00000553426 KRTAP10-2P60368 255 aa8.72□□□□□ -1.01
LINC00643-202ENST00000553426 RAB2AP61019 212 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms