RNA–Protein interactions for RNA: ENST00000552770.2

CEP290-206, Transcript of centrosomal protein 290, humanhuman

TSL 3

Gene CEP290, Length 1,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-206ENST00000552770 SKA2Q8WVK7 121 aaPredicted RBP0.61□□□□□ -2.31
CEP290-206ENST00000552770 NABP2Q9BQ15 211 aa0.61□□□□□ -2.31
CEP290-206ENST00000552770 LPAR5Q9H1C0 372 aa0.61□□□□□ -2.31
CEP290-206ENST00000552770 NINQ8N4C6 2090 aa0.61□□□□□ -2.31
CEP290-206ENST00000552770 A2MP01023 1474 aa0.61□□□□□ -2.31
CEP290-206ENST00000552770 CACNA1EQ15878 2313 aa0.6□□□□□ -2.31
CEP290-206ENST00000552770 KDELR1P24390 212 aa0.6□□□□□ -2.31
CEP290-206ENST00000552770 SNRPD3P62318 126 aaKnown RBP0.6□□□□□ -2.31
CEP290-206ENST00000552770 SPINK13Q1W4C9 94 aa0.6□□□□□ -2.31
CEP290-206ENST00000552770 ASB16-AS1Q495Z4 193 aa0.6□□□□□ -2.31
CEP290-206ENST00000552770 TMEM128Q5BJH2 165 aa0.6□□□□□ -2.31
CEP290-206ENST00000552770 C6orf52Q5T4I8 152 aa0.6□□□□□ -2.31
CEP290-206ENST00000552770 SMIM15Q7Z3B0 74 aa0.6□□□□□ -2.31
CEP290-206ENST00000552770 PLAC4Q8WY50 150 aa0.6□□□□□ -2.31
CEP290-206ENST00000552770 KCPQ6ZWJ8 1503 aa0.59□□□□□ -2.31
CEP290-206ENST00000552770 SAMD13Q5VXD3 122 aa0.59□□□□□ -2.31
CEP290-206ENST00000552770 OR8J3Q8NGG0 315 aa0.59□□□□□ -2.31
CEP290-206ENST00000552770 OR5A2Q8NGI9 324 aa0.59□□□□□ -2.31
CEP290-206ENST00000552770 SELENOSQ9BQE4 189 aa0.59□□□□□ -2.31
CEP290-206ENST00000552770 MRPL35Q9NZE8 188 aaKnown RBP0.59□□□□□ -2.31
CEP290-206ENST00000552770 SPAG17Q6Q759 2223 aa0.58□□□□□ -2.32
CEP290-206ENST00000552770 DSTQ03001 7570 aaKnown RBP0.58□□□□□ -2.32
CEP290-206ENST00000552770 TANC2Q9HCD6 1990 aa0.58□□□□□ -2.32
CEP290-206ENST00000552770 PRORSD1PA6NEY8 169 aa0.58□□□□□ -2.32
CEP290-206ENST00000552770 IGF2P01344 180 aa0.58□□□□□ -2.32
CEP290-206ENST00000552770 EVI2AP22794 236 aa0.58□□□□□ -2.32
CEP290-206ENST00000552770 CRYGSP22914 178 aa0.58□□□□□ -2.32
CEP290-206ENST00000552770 RPL22P35268 128 aaKnown RBP0.58□□□□□ -2.32
CEP290-206ENST00000552770 GTF2A1P52655 376 aaPredicted RBP0.58□□□□□ -2.32
CEP290-206ENST00000552770 HRCT1Q6UXD1 115 aa0.58□□□□□ -2.32
CEP290-206ENST00000552770 DEFB132Q7Z7B7 95 aa0.58□□□□□ -2.32
CEP290-206ENST00000552770 TEX29Q8N6K0 151 aa0.58□□□□□ -2.32
CEP290-206ENST00000552770 TMEM35BQ8NCS4 154 aa0.58□□□□□ -2.32
CEP290-206ENST00000552770 OR51A4Q8NGJ6 313 aa0.58□□□□□ -2.32
CEP290-206ENST00000552770 NAT14Q8WUY8 206 aa0.58□□□□□ -2.32
CEP290-206ENST00000552770 SMIM7Q9BQ49 75 aa0.58□□□□□ -2.32
CEP290-206ENST00000552770 DSPPQ9NZW4 1301 aa0.58□□□□□ -2.32
CEP290-206ENST00000552770 SYNE2Q8WXH0 6885 aaKnown RBP0.57□□□□□ -2.32
CEP290-206ENST00000552770 KIAA1549LQ6ZVL6 1849 aa0.57□□□□□ -2.32
CEP290-206ENST00000552770 FGD6Q6ZV73 1430 aa0.57□□□□□ -2.32
CEP290-206ENST00000552770 LOC107984156A0A0G2JMH3 177 aa0.57□□□□□ -2.32
CEP290-206ENST00000552770 LOC107984640A0A0U1RRK4 108 aa0.57□□□□□ -2.32
CEP290-206ENST00000552770 TMEM189A5PLL7 270 aa0.57□□□□□ -2.32
CEP290-206ENST00000552770 SLC25A4P12235 298 aa0.57□□□□□ -2.32
CEP290-206ENST00000552770 S100GP29377 79 aa0.57□□□□□ -2.32
CEP290-206ENST00000552770 BLCAPP62952 87 aa0.57□□□□□ -2.32
CEP290-206ENST00000552770 ARL17AQ8IVW1 177 aa0.57□□□□□ -2.32
CEP290-206ENST00000552770 CCDC115Q96NT0 180 aa0.57□□□□□ -2.32
CEP290-206ENST00000552770 CBLN4Q9NTU7 201 aa0.57□□□□□ -2.32
CEP290-206ENST00000552770 SPANXCQ9NY87 97 aa0.57□□□□□ -2.32
CEP290-206ENST00000552770 TRAPPC2LQ9UL33 140 aa0.57□□□□□ -2.32
CEP290-206ENST00000552770 FRAS1Q86XX4 4008 aa0.57□□□□□ -2.32
CEP290-206ENST00000552770 NAV2Q8IVL1 2488 aa0.57□□□□□ -2.32
CEP290-206ENST00000552770 FAM135BQ49AJ0 1406 aa0.56□□□□□ -2.32
CEP290-206ENST00000552770 PNMA8CA0A1B0GUJ8 204 aa0.56□□□□□ -2.32
CEP290-206ENST00000552770 HIGD1CA8MV81 97 aa0.56□□□□□ -2.32
CEP290-206ENST00000552770 TSTD3H0UI37 97 aa0.56□□□□□ -2.32
CEP290-206ENST00000552770 UQCRQO14949 82 aa0.56□□□□□ -2.32
CEP290-206ENST00000552770 EDF1O60869 148 aaKnown RBP0.56□□□□□ -2.32
CEP290-206ENST00000552770 HBDP02042 147 aa0.56□□□□□ -2.32
CEP290-206ENST00000552770 RPS28P62857 69 aaKnown RBP0.56□□□□□ -2.32
CEP290-206ENST00000552770 SPANXA1Q9NS26 97 aa0.56□□□□□ -2.32
CEP290-206ENST00000552770 FKBP11Q9NYL4 201 aa0.56□□□□□ -2.32
CEP290-206ENST00000552770 NEBP20929 6669 aa0.56□□□□□ -2.32
CEP290-206ENST00000552770 USP54Q70EL1 1684 aa0.56□□□□□ -2.32
CEP290-206ENST00000552770 TMEM30CPA0ZSE6 113 aa0.55□□□□□ -2.32
CEP290-206ENST00000552770 RPL7P18124 248 aaKnown RBP0.55□□□□□ -2.32
CEP290-206ENST00000552770 QRFPP83859 136 aa0.55□□□□□ -2.32
CEP290-206ENST00000552770 RHOHQ15669 191 aa0.55□□□□□ -2.32
CEP290-206ENST00000552770 IDO2Q6ZQW0 420 aa0.55□□□□□ -2.32
CEP290-206ENST00000552770 DMAC1Q96GE9 116 aa0.55□□□□□ -2.32
CEP290-206ENST00000552770 MRPL36Q9P0J6 103 aaKnown RBP0.55□□□□□ -2.32
CEP290-206ENST00000552770 HSPB11Q9Y547 144 aa0.55□□□□□ -2.32
CEP290-206ENST00000552770 BDP1A6H8Y1 2624 aa0.55□□□□□ -2.32
CEP290-206ENST00000552770 PBRM1Q86U86 1689 aa0.54□□□□□ -2.32
CEP290-206ENST00000552770 CKS2P33552 79 aa0.54□□□□□ -2.32
CEP290-206ENST00000552770 PSPHP78330 225 aa0.54□□□□□ -2.32
CEP290-206ENST00000552770 CSAG1Q6PB30 78 aa0.54□□□□□ -2.32
CEP290-206ENST00000552770 TPST1O60507 370 aa0.53□□□□□ -2.32
CEP290-206ENST00000552770 PRH1P02810 166 aa0.53□□□□□ -2.32
CEP290-206ENST00000552770 KRTAP21-1Q3LI58 79 aa0.53□□□□□ -2.32
CEP290-206ENST00000552770 GLYATL3Q5SZD4 288 aa0.53□□□□□ -2.32
CEP290-206ENST00000552770 BRK1Q8WUW1 75 aa0.53□□□□□ -2.32
CEP290-206ENST00000552770 SMR3AQ99954 134 aa0.53□□□□□ -2.32
CEP290-206ENST00000552770 MED23Q9ULK4 1368 aa0.53□□□□□ -2.32
CEP290-206ENST00000552770 FSIP2Q5CZC0 6907 aa0.53□□□□□ -2.33
CEP290-206ENST00000552770 ANK1P16157 1881 aa0.52□□□□□ -2.33
CEP290-206ENST00000552770 A0A0G2JMM0 328 aa0.52□□□□□ -2.33
CEP290-206ENST00000552770 FAM103A1Q9BTL3 118 aaKnown RBP0.52□□□□□ -2.33
CEP290-206ENST00000552770 IGHV1-24A0A0C4DH33 117 aa0.51□□□□□ -2.33
CEP290-206ENST00000552770 J3KT08 172 aa0.51□□□□□ -2.33
CEP290-206ENST00000552770 M0QZK8 103 aa0.51□□□□□ -2.33
CEP290-206ENST00000552770 DPM2O94777 84 aa0.51□□□□□ -2.33
CEP290-206ENST00000552770 HIST1H1BP16401 226 aaKnown RBP0.51□□□□□ -2.33
CEP290-206ENST00000552770 SDC4P31431 198 aa0.51□□□□□ -2.33
CEP290-206ENST00000552770 FXYD3Q14802 87 aa0.51□□□□□ -2.33
CEP290-206ENST00000552770 FER1L6Q2WGJ9 1857 aa0.51□□□□□ -2.33
CEP290-206ENST00000552770 LYPD5Q6UWN5 251 aa0.51□□□□□ -2.33
CEP290-206ENST00000552770 CTTNBP2Q8WZ74 1663 aa0.51□□□□□ -2.33
CEP290-206ENST00000552770 VPS25Q9BRG1 176 aa0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms