RNA–Protein interactions for RNA: ENST00000552608.6

LINC00661-206, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 1,130 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-206ENST00000552608 URGCP-MRPS24S4R325 110 aa8.16□□□□□ -1.1
LINC00661-206ENST00000552608 HLA-DRB4X5D2U9 266 aa8.16□□□□□ -1.1
LINC00661-206ENST00000552608 SETXQ7Z333 2677 aaKnown RBP8.16□□□□□ -1.1
LINC00661-206ENST00000552608 TRBV24-1A0A075B6N3 115 aa8.15□□□□□ -1.1
LINC00661-206ENST00000552608 TRAV21A0A0B4J279 112 aa8.15□□□□□ -1.1
LINC00661-206ENST00000552608 A0A1W2PPQ1 181 aa8.15□□□□□ -1.1
LINC00661-206ENST00000552608 FAM231BA6NCW3 169 aa8.15□□□□□ -1.1
LINC00661-206ENST00000552608 FAM19A4Q96LR4 140 aa8.15□□□□□ -1.1
LINC00661-206ENST00000552608 NAT8BQ9UHF3 227 aa8.15□□□□□ -1.1
LINC00661-206ENST00000552608 WNK1Q9H4A3 2382 aa8.14□□□□□ -1.11
LINC00661-206ENST00000552608 SMIM27A0A1W2PRY6 76 aa8.14□□□□□ -1.11
LINC00661-206ENST00000552608 COLCA2A8K830 154 aa8.14□□□□□ -1.11
LINC00661-206ENST00000552608 ORM1P02763 201 aa8.14□□□□□ -1.11
LINC00661-206ENST00000552608 CDKN1BP46527 198 aa8.14□□□□□ -1.11
LINC00661-206ENST00000552608 CRIP1P50238 77 aa8.14□□□□□ -1.11
LINC00661-206ENST00000552608 DEFB1P60022 68 aa8.14□□□□□ -1.11
LINC00661-206ENST00000552608 BEAN1Q3B7T3 259 aa8.14□□□□□ -1.11
LINC00661-206ENST00000552608 ACTL10Q5JWF8 245 aa8.14□□□□□ -1.11
LINC00661-206ENST00000552608 GDF5OSQ5U4N7 250 aa8.14□□□□□ -1.11
LINC00661-206ENST00000552608 Q6AWC8 147 aa8.14□□□□□ -1.11
LINC00661-206ENST00000552608 LINC00322Q6ZN03 302 aaPredicted RBP8.14□□□□□ -1.11
LINC00661-206ENST00000552608 GTSCR1Q86UQ5 136 aa8.14□□□□□ -1.11
LINC00661-206ENST00000552608 APRG1Q8IVJ8 170 aa8.14□□□□□ -1.11
LINC00661-206ENST00000552608 STHQ8IWL8 128 aa8.14□□□□□ -1.11
LINC00661-206ENST00000552608 WFDC9Q8NEX5 89 aa8.14□□□□□ -1.11
LINC00661-206ENST00000552608 BORCS7Q96B45 105 aa8.14□□□□□ -1.11
LINC00661-206ENST00000552608 FAM210BQ96KR6 192 aa8.14□□□□□ -1.11
LINC00661-206ENST00000552608 KNCNA6PVL3 124 aa8.13□□□□□ -1.11
LINC00661-206ENST00000552608 H3BMM0 161 aa8.13□□□□□ -1.11
LINC00661-206ENST00000552608 J3KRW8 73 aa8.13□□□□□ -1.11
LINC00661-206ENST00000552608 IGKV3-20P01619 116 aa8.13□□□□□ -1.11
LINC00661-206ENST00000552608 AMBPP02760 352 aa8.13□□□□□ -1.11
LINC00661-206ENST00000552608 ZNF80P51504 273 aaPredicted RBP8.13□□□□□ -1.11
LINC00661-206ENST00000552608 FAM3BP58499 235 aaPredicted RBP8.13□□□□□ -1.11
LINC00661-206ENST00000552608 NUTF2P61970 127 aaKnown RBP8.13□□□□□ -1.11
LINC00661-206ENST00000552608 ODF3L2Q3SX64 289 aa8.13□□□□□ -1.11
LINC00661-206ENST00000552608 LINC01559Q495D7 138 aa8.13□□□□□ -1.11
LINC00661-206ENST00000552608 COX19Q49B96 90 aa8.13□□□□□ -1.11
LINC00661-206ENST00000552608 ZFAND2AQ8N6M9 145 aa8.13□□□□□ -1.11
LINC00661-206ENST00000552608 CLUHP3Q96NS8 147 aa8.13□□□□□ -1.11
LINC00661-206ENST00000552608 PYGO2Q9BRQ0 406 aa8.13□□□□□ -1.11
LINC00661-206ENST00000552608 ZMAT5Q9UDW3 170 aaKnown RBP8.13□□□□□ -1.11
LINC00661-206ENST00000552608 TGIF2-C20orf24A0A0A6YYL0 155 aa8.12□□□□□ -1.11
LINC00661-206ENST00000552608 C7orf71A4D174 169 aa8.12□□□□□ -1.11
LINC00661-206ENST00000552608 A8MTW9 85 aa8.12□□□□□ -1.11
LINC00661-206ENST00000552608 KLLNB2CW77 178 aa8.12□□□□□ -1.11
LINC00661-206ENST00000552608 CA1P00915 261 aaPredicted RBP8.12□□□□□ -1.11
LINC00661-206ENST00000552608 RAB5AP20339 215 aa8.12□□□□□ -1.11
LINC00661-206ENST00000552608 RNASE4P34096 147 aaKnown RBP8.12□□□□□ -1.11
LINC00661-206ENST00000552608 TCL1AP56279 114 aa8.12□□□□□ -1.11
LINC00661-206ENST00000552608 KCNS1Q96KK3 526 aa8.12□□□□□ -1.11
LINC00661-206ENST00000552608 YPEL4Q96NS1 127 aa8.12□□□□□ -1.11
LINC00661-206ENST00000552608 NEU1Q99519 415 aa8.12□□□□□ -1.11
LINC00661-206ENST00000552608 TYMSP04818 313 aa8.11□□□□□ -1.11
LINC00661-206ENST00000552608 CXCL1P09341 107 aa8.11□□□□□ -1.11
LINC00661-206ENST00000552608 RPS10P46783 165 aaKnown RBP8.11□□□□□ -1.11
LINC00661-206ENST00000552608 ATP5L2Q7Z4Y8 100 aa8.11□□□□□ -1.11
LINC00661-206ENST00000552608 TMSB15BA0A087X1C1 80 aa8.1□□□□□ -1.11
LINC00661-206ENST00000552608 HIGD1CA8MV81 97 aa8.1□□□□□ -1.11
LINC00661-206ENST00000552608 S100A8P05109 93 aa8.1□□□□□ -1.11
LINC00661-206ENST00000552608 CD7P09564 240 aa8.1□□□□□ -1.11
LINC00661-206ENST00000552608 FOXA3P55318 350 aaPredicted RBP8.1□□□□□ -1.11
LINC00661-206ENST00000552608 SPINK13Q1W4C9 94 aa8.1□□□□□ -1.11
LINC00661-206ENST00000552608 PRR31Q5SQ13 230 aa8.1□□□□□ -1.11
LINC00661-206ENST00000552608 PRR9Q5T870 116 aa8.1□□□□□ -1.11
LINC00661-206ENST00000552608 WDR73Q6P4I2 378 aa8.1□□□□□ -1.11
LINC00661-206ENST00000552608 RASL11AQ6T310 242 aa8.1□□□□□ -1.11
LINC00661-206ENST00000552608 FAM159AQ6UWV7 190 aa8.1□□□□□ -1.11
LINC00661-206ENST00000552608 AMTNQ6UX39 209 aa8.1□□□□□ -1.11
LINC00661-206ENST00000552608 NUP35Q8NFH5 326 aa8.1□□□□□ -1.11
LINC00661-206ENST00000552608 C20orf144Q9BQM9 153 aa8.1□□□□□ -1.11
LINC00661-206ENST00000552608 SRD5A3Q9H8P0 318 aa8.1□□□□□ -1.11
LINC00661-206ENST00000552608 TRAV12-3A0A0B4J271 114 aa8.09□□□□□ -1.11
LINC00661-206ENST00000552608 A0A1B0GW15 77 aa8.09□□□□□ -1.11
LINC00661-206ENST00000552608 F2Z2F3 143 aa8.09□□□□□ -1.11
LINC00661-206ENST00000552608 WIPF1O43516 503 aa8.09□□□□□ -1.11
LINC00661-206ENST00000552608 MT-ND6P03923 174 aa8.09□□□□□ -1.11
LINC00661-206ENST00000552608 IGLL1P15814 213 aa8.09□□□□□ -1.11
LINC00661-206ENST00000552608 RIGQ13278 110 aa8.09□□□□□ -1.11
LINC00661-206ENST00000552608 ZNF124Q15973 351 aa8.09□□□□□ -1.11
LINC00661-206ENST00000552608 GFI1BQ5VTD9 330 aa8.09□□□□□ -1.11
LINC00661-206ENST00000552608 MORN3Q6PF18 240 aaPredicted RBP8.09□□□□□ -1.11
LINC00661-206ENST00000552608 TRPT1Q86TN4 253 aaKnown RBP8.09□□□□□ -1.11
LINC00661-206ENST00000552608 FER1L6-AS1Q8NA97 138 aa8.09□□□□□ -1.11
LINC00661-206ENST00000552608 PGLYRP4Q96LB8 373 aa8.09□□□□□ -1.11
LINC00661-206ENST00000552608 NAGKQ9UJ70 344 aa8.09□□□□□ -1.11
LINC00661-206ENST00000552608 A0A1B0GUT8 65 aa8.08□□□□□ -1.12
LINC00661-206ENST00000552608 C1orf196B1AJZ1 125 aa8.08□□□□□ -1.12
LINC00661-206ENST00000552608 M0R2Z0 102 aa8.08□□□□□ -1.12
LINC00661-206ENST00000552608 INSP01308 110 aa8.08□□□□□ -1.12
LINC00661-206ENST00000552608 S100A4P26447 101 aaKnown RBP8.08□□□□□ -1.12
LINC00661-206ENST00000552608 ASIPP42127 132 aa8.08□□□□□ -1.12
LINC00661-206ENST00000552608 MRPL54Q6P161 138 aaKnown RBP8.08□□□□□ -1.12
LINC00661-206ENST00000552608 TPPP3Q9BW30 176 aa8.08□□□□□ -1.12
LINC00661-206ENST00000552608 C1QTNF4Q9BXJ3 329 aa8.08□□□□□ -1.12
LINC00661-206ENST00000552608 TRAV12-2A0A075B6T6 113 aa8.07□□□□□ -1.12
LINC00661-206ENST00000552608 IGHV1OR15-1A0A075B7D0 117 aa8.07□□□□□ -1.12
LINC00661-206ENST00000552608 IGKV3D-20A0A0C4DH25 116 aa8.07□□□□□ -1.12
LINC00661-206ENST00000552608 GRIFINA4D1Z8 144 aa8.07□□□□□ -1.12
LINC00661-206ENST00000552608 SPINK4O60575 86 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms