RNA–Protein interactions for RNA: ENST00000552422.5

CNOT2-238, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 3

Gene CNOT2, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-238	ENST00000552422	ODF3	Q96PU9	254 aa		4.78	□□□□□ -1.64
CNOT2-238	ENST00000552422	ZNF471	Q9BX82	626 aa	Predicted RBP	4.78	□□□□□ -1.64
CNOT2-238	ENST00000552422	ACTR3C	Q9C0K3	210 aa	Predicted RBP	4.78	□□□□□ -1.64
CNOT2-238	ENST00000552422		Q9H3A6	140 aa		4.78	□□□□□ -1.64
CNOT2-238	ENST00000552422	TRAV12-2	A0A075B6T6	113 aa		4.77	□□□□□ -1.65
CNOT2-238	ENST00000552422	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	4.77	□□□□□ -1.65
CNOT2-238	ENST00000552422	CTXND1	A0A1B0GTU2	59 aa		4.77	□□□□□ -1.65
CNOT2-238	ENST00000552422		A0A1B0GVG6	124 aa		4.77	□□□□□ -1.65
CNOT2-238	ENST00000552422	SMIM9	A6NGZ8	99 aa		4.77	□□□□□ -1.65
CNOT2-238	ENST00000552422	DEFB4A	O15263	64 aa		4.77	□□□□□ -1.65
CNOT2-238	ENST00000552422	PFDN1	O60925	122 aa		4.77	□□□□□ -1.65
CNOT2-238	ENST00000552422	CXorf1	O96002	111 aa		4.77	□□□□□ -1.65
CNOT2-238	ENST00000552422	IGKV2D-40	P01614	121 aa	Predicted RBP	4.77	□□□□□ -1.65
CNOT2-238	ENST00000552422	SEC11B	P0C7V7	166 aa		4.77	□□□□□ -1.65
CNOT2-238	ENST00000552422	RBMY1A1	P0DJD3	496 aa	Known RBP	4.77	□□□□□ -1.65
CNOT2-238	ENST00000552422	RBMY1C	P0DJD4	496 aa		4.77	□□□□□ -1.65
CNOT2-238	ENST00000552422	CT45A10	P0DMU9	189 aa		4.77	□□□□□ -1.65
CNOT2-238	ENST00000552422	CDKN1B	P46527	198 aa		4.77	□□□□□ -1.65
CNOT2-238	ENST00000552422	CD300C	Q08708	224 aa		4.77	□□□□□ -1.65
CNOT2-238	ENST00000552422	RBMY1F	Q15415	496 aa	Known RBP	4.77	□□□□□ -1.65
CNOT2-238	ENST00000552422	AKR1C8P	Q5T2L2	129 aa		4.77	□□□□□ -1.65
CNOT2-238	ENST00000552422	ARL6IP6	Q8N6S5	226 aa		4.77	□□□□□ -1.65
CNOT2-238	ENST00000552422	NRAC	Q8N912	160 aa		4.77	□□□□□ -1.65
CNOT2-238	ENST00000552422	STOML3	Q8TAV4	291 aa		4.77	□□□□□ -1.65
CNOT2-238	ENST00000552422	FAM19A4	Q96LR4	140 aa		4.77	□□□□□ -1.65
CNOT2-238	ENST00000552422	HYLS1	Q96M11	299 aa		4.77	□□□□□ -1.65
CNOT2-238	ENST00000552422	OTOR	Q9NRC9	128 aa		4.77	□□□□□ -1.65
CNOT2-238	ENST00000552422	TMEM167B	Q9NRX6	74 aa		4.77	□□□□□ -1.65
CNOT2-238	ENST00000552422	GOLT1B	Q9Y3E0	138 aa		4.77	□□□□□ -1.65
CNOT2-238	ENST00000552422	ALMS1	Q8TCU4	4167 aa		4.76	□□□□□ -1.65
CNOT2-238	ENST00000552422	IGHV3OR16-12	A0A075B7B8	117 aa		4.76	□□□□□ -1.65
CNOT2-238	ENST00000552422	RBAKDN	A6NC62	111 aa		4.76	□□□□□ -1.65
CNOT2-238	ENST00000552422	KLLN	B2CW77	178 aa		4.76	□□□□□ -1.65
CNOT2-238	ENST00000552422	UMAD1	C9J7I0	102 aa		4.76	□□□□□ -1.65
CNOT2-238	ENST00000552422	SLC25A5	P05141	298 aa	Known RBP	4.76	□□□□□ -1.65
CNOT2-238	ENST00000552422	TSPO	P30536	169 aa		4.76	□□□□□ -1.65
CNOT2-238	ENST00000552422	CSN1S1	P47710	185 aa		4.76	□□□□□ -1.65
CNOT2-238	ENST00000552422	FHIT	P49789	147 aa		4.76	□□□□□ -1.65
CNOT2-238	ENST00000552422	EIF5A	P63241	154 aa	Known RBP	4.76	□□□□□ -1.65
CNOT2-238	ENST00000552422	ERCC8	Q13216	396 aa		4.76	□□□□□ -1.65
CNOT2-238	ENST00000552422	RYR3	Q15413	4870 aa		4.76	□□□□□ -1.65
CNOT2-238	ENST00000552422	LGALSL	Q3ZCW2	172 aa	Predicted RBP	4.76	□□□□□ -1.65
CNOT2-238	ENST00000552422	FAM74A1	Q5RGS3	127 aa		4.76	□□□□□ -1.65
CNOT2-238	ENST00000552422	C10orf25	Q5T742	122 aa		4.76	□□□□□ -1.65
CNOT2-238	ENST00000552422	GFI1B	Q5VTD9	330 aa		4.76	□□□□□ -1.65
CNOT2-238	ENST00000552422	TMEM256	Q8N2U0	113 aa		4.76	□□□□□ -1.65
CNOT2-238	ENST00000552422	RXFP4	Q8TDU9	374 aa		4.76	□□□□□ -1.65
CNOT2-238	ENST00000552422	LINC00477	Q96M19	166 aa		4.76	□□□□□ -1.65
CNOT2-238	ENST00000552422	VGLL1	Q99990	258 aa		4.76	□□□□□ -1.65
CNOT2-238	ENST00000552422	C20orf144	Q9BQM9	153 aa		4.76	□□□□□ -1.65
CNOT2-238	ENST00000552422	TMEM208	Q9BTX3	173 aa		4.76	□□□□□ -1.65
CNOT2-238	ENST00000552422	AGPAT4-IT1	Q9H0P7	198 aa		4.76	□□□□□ -1.65
CNOT2-238	ENST00000552422	PPP1R14D	Q9NXH3	145 aa		4.76	□□□□□ -1.65
CNOT2-238	ENST00000552422	TRBV7-9	A0A0J9YWB2	115 aa		4.75	□□□□□ -1.65
CNOT2-238	ENST00000552422		A0A1W2PRE2	83 aa		4.75	□□□□□ -1.65
CNOT2-238	ENST00000552422	TMEM189	A5PLL7	270 aa		4.75	□□□□□ -1.65
CNOT2-238	ENST00000552422	MAP1LC3B2	A6NCE7	125 aa		4.75	□□□□□ -1.65
CNOT2-238	ENST00000552422	GGTLC3	B5MD39	225 aa		4.75	□□□□□ -1.65
CNOT2-238	ENST00000552422	HBE1	P02100	147 aa		4.75	□□□□□ -1.65
CNOT2-238	ENST00000552422	NMB	P08949	121 aa		4.75	□□□□□ -1.65
CNOT2-238	ENST00000552422	TPT1	P13693	172 aa	Known RBP	4.75	□□□□□ -1.65
CNOT2-238	ENST00000552422	CRISP2	P16562	243 aa		4.75	□□□□□ -1.65
CNOT2-238	ENST00000552422	LEP	P41159	167 aa		4.75	□□□□□ -1.65
CNOT2-238	ENST00000552422	RRN3P1	Q2M238	152 aa		4.75	□□□□□ -1.65
CNOT2-238	ENST00000552422	TMEM78	Q5T7P6	136 aa		4.75	□□□□□ -1.65
CNOT2-238	ENST00000552422	ZFAND6	Q6FIF0	208 aa		4.75	□□□□□ -1.65
CNOT2-238	ENST00000552422	C9orf62	Q8N4C0	152 aa		4.75	□□□□□ -1.65
CNOT2-238	ENST00000552422	ZFAND2A	Q8N6M9	145 aa		4.75	□□□□□ -1.65
CNOT2-238	ENST00000552422	C5orf17	Q8NAS9	161 aa		4.75	□□□□□ -1.65
CNOT2-238	ENST00000552422		Q8TAT8	98 aa		4.75	□□□□□ -1.65
CNOT2-238	ENST00000552422	C11orf45	Q8TAV5	145 aa		4.75	□□□□□ -1.65
CNOT2-238	ENST00000552422	TMED6	Q8WW62	240 aa		4.75	□□□□□ -1.65
CNOT2-238	ENST00000552422	MAP1LC3B	Q9GZQ8	125 aa		4.75	□□□□□ -1.65
CNOT2-238	ENST00000552422	ZNF492	Q9P255	531 aa		4.75	□□□□□ -1.65
CNOT2-238	ENST00000552422	CELA1	Q9UNI1	258 aa		4.75	□□□□□ -1.65
CNOT2-238	ENST00000552422	VPS13D	Q5THJ4	4388 aa		4.75	□□□□□ -1.65
CNOT2-238	ENST00000552422	TRAV12-3	A0A0B4J271	114 aa		4.74	□□□□□ -1.65
CNOT2-238	ENST00000552422	SERTM2	A0A1B0GWG4	89 aa		4.74	□□□□□ -1.65
CNOT2-238	ENST00000552422	C7orf71	A4D174	169 aa		4.74	□□□□□ -1.65
CNOT2-238	ENST00000552422	PGP	A6NDG6	321 aa		4.74	□□□□□ -1.65
CNOT2-238	ENST00000552422	CXorf65	A6NEN9	183 aa		4.74	□□□□□ -1.65
CNOT2-238	ENST00000552422	NUPR2	A6NF83	97 aa		4.74	□□□□□ -1.65
CNOT2-238	ENST00000552422		H7BYZ3	331 aa		4.74	□□□□□ -1.65
CNOT2-238	ENST00000552422	TCRA	P04437	139 aa		4.74	□□□□□ -1.65
CNOT2-238	ENST00000552422	ZNF138	P52744	262 aa		4.74	□□□□□ -1.65
CNOT2-238	ENST00000552422	FGF8	P55075	233 aa	Predicted RBP	4.74	□□□□□ -1.65
CNOT2-238	ENST00000552422	TAS2R60	P59551	318 aa		4.74	□□□□□ -1.65
CNOT2-238	ENST00000552422	NANOS2	P60321	138 aa	Known RBP	4.74	□□□□□ -1.65
CNOT2-238	ENST00000552422	PMS2P11	Q13670	270 aa		4.74	□□□□□ -1.65
CNOT2-238	ENST00000552422	ZFP69	Q49AA0	526 aa		4.74	□□□□□ -1.65
CNOT2-238	ENST00000552422	DPPA3	Q6W0C5	159 aa		4.74	□□□□□ -1.65
CNOT2-238	ENST00000552422	IQCF2	Q8IXL9	164 aa		4.74	□□□□□ -1.65
CNOT2-238	ENST00000552422	CMTM2	Q8TAZ6	248 aa		4.74	□□□□□ -1.65
CNOT2-238	ENST00000552422	RNASE8	Q8TDE3	154 aa	Known RBP	4.74	□□□□□ -1.65
CNOT2-238	ENST00000552422	YTHDF2	Q9Y5A9	579 aa	Known RBP	4.74	□□□□□ -1.65
CNOT2-238	ENST00000552422	LENEP	Q9Y5L5	61 aa		4.74	□□□□□ -1.65
CNOT2-238	ENST00000552422	ARL2-SNX15	V9GYD0	113 aa		4.74	□□□□□ -1.65
CNOT2-238	ENST00000552422	KMT2A	Q03164	3969 aa		4.74	□□□□□ -1.65
CNOT2-238	ENST00000552422	RYR2	Q92736	4967 aa		4.73	□□□□□ -1.65
CNOT2-238	ENST00000552422	HYDIN	Q4G0P3	5121 aa		4.73	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms