RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 FAM104BQ5XKR9 115 aa10.64□□□□□ -0.71
RAB3IP-216ENST00000552199 REC114Q7Z4M0 266 aa10.64□□□□□ -0.71
RAB3IP-216ENST00000552199 KIR2DL5AQ8N109 375 aa10.64□□□□□ -0.71
RAB3IP-216ENST00000552199 LINC00477Q96M19 166 aa10.64□□□□□ -0.71
RAB3IP-216ENST00000552199 ZNF702PQ9H963 129 aa10.64□□□□□ -0.71
RAB3IP-216ENST00000552199 LENEPQ9Y5L5 61 aa10.64□□□□□ -0.71
RAB3IP-216ENST00000552199 ABCA12Q86UK0 2595 aa10.64□□□□□ -0.71
RAB3IP-216ENST00000552199 NAV2Q8IVL1 2488 aa10.64□□□□□ -0.71
RAB3IP-216ENST00000552199 RPL11P62913 178 aaKnown RBP10.64□□□□□ -0.71
RAB3IP-216ENST00000552199 C14orf144Q96I85 54 aa10.64□□□□□ -0.71
RAB3IP-216ENST00000552199 CNFNQ9BYD5 112 aa10.64□□□□□ -0.71
RAB3IP-216ENST00000552199 C11orf21Q9P2W6 132 aa10.64□□□□□ -0.71
RAB3IP-216ENST00000552199 U3KQK5 164 aa10.64□□□□□ -0.71
RAB3IP-216ENST00000552199 IGKV3D-20A0A0C4DH25 116 aa10.63□□□□□ -0.71
RAB3IP-216ENST00000552199 RPLP1P05386 114 aaKnown RBP10.63□□□□□ -0.71
RAB3IP-216ENST00000552199 TWIST1Q15672 202 aa10.63□□□□□ -0.71
RAB3IP-216ENST00000552199 FOXE3Q13461 319 aa10.62□□□□□ -0.71
RAB3IP-216ENST00000552199 EBLN2Q6P2I7 272 aa10.62□□□□□ -0.71
RAB3IP-216ENST00000552199 AMN1Q8IY45 258 aa10.62□□□□□ -0.71
RAB3IP-216ENST00000552199 OR10J6PQ8NGY7 276 aa10.62□□□□□ -0.71
RAB3IP-216ENST00000552199 UFC1Q9Y3C8 167 aa10.62□□□□□ -0.71
RAB3IP-216ENST00000552199 IGHV1-24A0A0C4DH33 117 aa10.62□□□□□ -0.71
RAB3IP-216ENST00000552199 ELANEP08246 267 aa10.62□□□□□ -0.71
RAB3IP-216ENST00000552199 PMCHL1Q16048 86 aa10.62□□□□□ -0.71
RAB3IP-216ENST00000552199 NDUFAF3Q9BU61 184 aa10.62□□□□□ -0.71
RAB3IP-216ENST00000552199 VAMP8Q9BV40 100 aa10.62□□□□□ -0.71
RAB3IP-216ENST00000552199 GCN1Q92616 2671 aaKnown RBP10.62□□□□□ -0.71
RAB3IP-216ENST00000552199 C2orf70A6NJV1 201 aa10.61□□□□□ -0.71
RAB3IP-216ENST00000552199 D6R8Y8 96 aa10.61□□□□□ -0.71
RAB3IP-216ENST00000552199 CSN3P07498 182 aa10.61□□□□□ -0.71
RAB3IP-216ENST00000552199 RAB4AP20338 218 aa10.61□□□□□ -0.71
RAB3IP-216ENST00000552199 EDN2P20800 178 aa10.61□□□□□ -0.71
RAB3IP-216ENST00000552199 MRPL51Q4U2R6 128 aaKnown RBP10.61□□□□□ -0.71
RAB3IP-216ENST00000552199 MYOZ3Q8TDC0 251 aa10.61□□□□□ -0.71
RAB3IP-216ENST00000552199 C20orf144Q9BQM9 153 aa10.61□□□□□ -0.71
RAB3IP-216ENST00000552199 TMEM191AQ9H0A3 160 aa10.61□□□□□ -0.71
RAB3IP-216ENST00000552199 APCP25054 2843 aa10.61□□□□□ -0.71
RAB3IP-216ENST00000552199 IGKV3-7A0A075B6H7 116 aa10.6□□□□□ -0.71
RAB3IP-216ENST00000552199 BTF3P20290 206 aaKnown RBP10.6□□□□□ -0.71
RAB3IP-216ENST00000552199 PRELID3AQ96N28 172 aa10.6□□□□□ -0.71
RAB3IP-216ENST00000552199 MSRB1Q9NZV6 116 aa10.6□□□□□ -0.71
RAB3IP-216ENST00000552199 OR5AL1P0C617 328 aa10.6□□□□□ -0.71
RAB3IP-216ENST00000552199 PRR9Q5T870 116 aa10.6□□□□□ -0.71
RAB3IP-216ENST00000552199 ORMDL3Q8N138 153 aa10.6□□□□□ -0.71
RAB3IP-216ENST00000552199 ZFAND2AQ8N6M9 145 aa10.6□□□□□ -0.71
RAB3IP-216ENST00000552199 PAM16Q9Y3D7 125 aa10.6□□□□□ -0.71
RAB3IP-216ENST00000552199 LGALS1P09382 135 aaKnown RBP10.59□□□□□ -0.71
RAB3IP-216ENST00000552199 DEFB1P60022 68 aa10.59□□□□□ -0.71
RAB3IP-216ENST00000552199 Q6ZQT7 251 aa10.59□□□□□ -0.71
RAB3IP-216ENST00000552199 RNF152Q8N8N0 203 aa10.59□□□□□ -0.71
RAB3IP-216ENST00000552199 OR8A1Q8NGG7 326 aa10.59□□□□□ -0.71
RAB3IP-216ENST00000552199 PRSS3P2Q8NHM4 247 aa10.59□□□□□ -0.71
RAB3IP-216ENST00000552199 SELENOKQ9Y6D0 94 aa10.59□□□□□ -0.71
RAB3IP-216ENST00000552199 TEX15Q9BXT5 2789 aa10.59□□□□□ -0.71
RAB3IP-216ENST00000552199 DOPEY2Q9Y3R5 2298 aa10.59□□□□□ -0.71
RAB3IP-216ENST00000552199 LEPROTL1O95214 131 aa10.58□□□□□ -0.72
RAB3IP-216ENST00000552199 SRD5A1P18405 259 aa10.58□□□□□ -0.72
RAB3IP-216ENST00000552199 FAM19A4Q96LR4 140 aa10.58□□□□□ -0.72
RAB3IP-216ENST00000552199 UBE2E2Q96LR5 201 aa10.58□□□□□ -0.72
RAB3IP-216ENST00000552199 MXRA5Q9NR99 2828 aa10.58□□□□□ -0.72
RAB3IP-216ENST00000552199 ID1P41134 155 aa10.58□□□□□ -0.72
RAB3IP-216ENST00000552199 SAMD13Q5VXD3 122 aa10.58□□□□□ -0.72
RAB3IP-216ENST00000552199 HIST2H2BCQ6DN03 193 aa10.58□□□□□ -0.72
RAB3IP-216ENST00000552199 FA2HQ7L5A8 372 aa10.58□□□□□ -0.72
RAB3IP-216ENST00000552199 Q8N2B8 174 aa10.58□□□□□ -0.72
RAB3IP-216ENST00000552199 WFDC11Q8NEX6 87 aa10.58□□□□□ -0.72
RAB3IP-216ENST00000552199 RNF185Q96GF1 192 aa10.58□□□□□ -0.72
RAB3IP-216ENST00000552199 TMEM70Q9BUB7 260 aa10.58□□□□□ -0.72
RAB3IP-216ENST00000552199 AP5S1Q9NUS5 200 aa10.58□□□□□ -0.72
RAB3IP-216ENST00000552199 F6UB75 175 aa10.57□□□□□ -0.72
RAB3IP-216ENST00000552199 PLA2G2AP14555 144 aa10.57□□□□□ -0.72
RAB3IP-216ENST00000552199 CKS2P33552 79 aa10.57□□□□□ -0.72
RAB3IP-216ENST00000552199 LINC00173Q6ZV60 143 aa10.57□□□□□ -0.72
RAB3IP-216ENST00000552199 DCANP1Q8TF63 244 aa10.57□□□□□ -0.72
RAB3IP-216ENST00000552199 SIGLEC8Q9NYZ4 499 aa10.57□□□□□ -0.72
RAB3IP-216ENST00000552199 CREBBPQ92793 2442 aa10.57□□□□□ -0.72
RAB3IP-216ENST00000552199 TRAV21A0A0B4J279 112 aa10.56□□□□□ -0.72
RAB3IP-216ENST00000552199 TRBV7-9A0A0J9YWB2 115 aa10.56□□□□□ -0.72
RAB3IP-216ENST00000552199 LGALS9O00182 355 aa10.56□□□□□ -0.72
RAB3IP-216ENST00000552199 IFI27P40305 119 aaPredicted RBP10.56□□□□□ -0.72
RAB3IP-216ENST00000552199 APRG1Q8IVJ8 170 aa10.56□□□□□ -0.72
RAB3IP-216ENST00000552199 IGHV4OR15-8A0A075B7B6 117 aa10.56□□□□□ -0.72
RAB3IP-216ENST00000552199 A0A087WW49 117 aa10.56□□□□□ -0.72
RAB3IP-216ENST00000552199 LOC389332A0A1B0GUA5 103 aa10.56□□□□□ -0.72
RAB3IP-216ENST00000552199 SMKR1H3BMG3 65 aa10.56□□□□□ -0.72
RAB3IP-216ENST00000552199 J3KRW8 73 aa10.56□□□□□ -0.72
RAB3IP-216ENST00000552199 J3QKU1 62 aa10.56□□□□□ -0.72
RAB3IP-216ENST00000552199 CRXO43186 299 aaPredicted RBP10.56□□□□□ -0.72
RAB3IP-216ENST00000552199 SNAI2O43623 268 aa10.56□□□□□ -0.72
RAB3IP-216ENST00000552199 SPATA12Q7Z6I5 190 aa10.56□□□□□ -0.72
RAB3IP-216ENST00000552199 DUX5Q96PT3 197 aa10.56□□□□□ -0.72
RAB3IP-216ENST00000552199 MIEN1Q9BRT3 115 aa10.56□□□□□ -0.72
RAB3IP-216ENST00000552199 PPBPP02775 128 aa10.55□□□□□ -0.72
RAB3IP-216ENST00000552199 SYNJ2BPP57105 145 aa10.55□□□□□ -0.72
RAB3IP-216ENST00000552199 SPATA45Q537H7 98 aa10.55□□□□□ -0.72
RAB3IP-216ENST00000552199 WFDC3Q8IUB2 231 aa10.55□□□□□ -0.72
RAB3IP-216ENST00000552199 TEX29Q8N6K0 151 aa10.55□□□□□ -0.72
RAB3IP-216ENST00000552199 OR10AG1Q8NH19 301 aa10.55□□□□□ -0.72
RAB3IP-216ENST00000552199 MS4A6AQ9H2W1 248 aa10.55□□□□□ -0.72
RAB3IP-216ENST00000552199 HSPB8Q9UJY1 196 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms