RNA–Protein interactions for RNA: ENST00000551655.1

VPS29-209, Transcript of VPS29, retromer complex component, humanhuman

TSL 5

Gene VPS29, Length 766 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-209ENST00000551655 NPVFQ9HCQ7 196 aa9.21□□□□□ -0.94
VPS29-209ENST00000551655 PSENENQ9NZ42 101 aa9.21□□□□□ -0.94
VPS29-209ENST00000551655 ZNF492Q9P255 531 aa9.21□□□□□ -0.94
VPS29-209ENST00000551655 RABL2BQ9UNT1 228 aa9.21□□□□□ -0.94
VPS29-209ENST00000551655 COX11Q9Y6N1 276 aa9.21□□□□□ -0.94
VPS29-209ENST00000551655 DUXBA0A1W2PPF3 345 aa9.2□□□□□ -0.94
VPS29-209ENST00000551655 FABP12A6NFH5 140 aa9.2□□□□□ -0.94
VPS29-209ENST00000551655 NMBP08949 121 aa9.2□□□□□ -0.94
VPS29-209ENST00000551655 METTL15P1P0C7V9 234 aa9.2□□□□□ -0.94
VPS29-209ENST00000551655 SLC25A6P12236 298 aa9.2□□□□□ -0.94
VPS29-209ENST00000551655 VWC2Q2TAL6 325 aa9.2□□□□□ -0.94
VPS29-209ENST00000551655 TOR2AQ5JU69 321 aa9.2□□□□□ -0.94
VPS29-209ENST00000551655 FAM122CQ6P4D5 195 aa9.2□□□□□ -0.94
VPS29-209ENST00000551655 MGST2Q99735 147 aa9.2□□□□□ -0.94
VPS29-209ENST00000551655 VCX3BQ9H321 246 aa9.2□□□□□ -0.94
VPS29-209ENST00000551655 TRAV8-1A0A0A6YYK1 113 aa9.19□□□□□ -0.94
VPS29-209ENST00000551655 A0A0D9SG52 128 aa9.19□□□□□ -0.94
VPS29-209ENST00000551655 GNRH2O43555 120 aa9.19□□□□□ -0.94
VPS29-209ENST00000551655 ZNF253O75346 499 aa9.19□□□□□ -0.94
VPS29-209ENST00000551655 HOXB5P09067 269 aa9.19□□□□□ -0.94
VPS29-209ENST00000551655 BAK1Q16611 211 aa9.19□□□□□ -0.94
VPS29-209ENST00000551655 RMI2Q96E14 147 aa9.19□□□□□ -0.94
VPS29-209ENST00000551655 NAGKQ9UJ70 344 aa9.19□□□□□ -0.94
VPS29-209ENST00000551655 FBLL1A6NHQ2 334 aaKnown RBP9.18□□□□□ -0.94
VPS29-209ENST00000551655 M0R2P5 195 aa9.18□□□□□ -0.94
VPS29-209ENST00000551655 PYYP10082 97 aa9.18□□□□□ -0.94
VPS29-209ENST00000551655 ARL16Q0P5N6 197 aa9.18□□□□□ -0.94
VPS29-209ENST00000551655 RHOHQ15669 191 aa9.18□□□□□ -0.94
VPS29-209ENST00000551655 PRADC1Q9BSG0 188 aa9.18□□□□□ -0.94
VPS29-209ENST00000551655 MGAT4CQ9UBM8 478 aa9.18□□□□□ -0.94
VPS29-209ENST00000551655 KLK12Q9UKR0 248 aa9.18□□□□□ -0.94
VPS29-209ENST00000551655 TRGV11A0A075B6L2 103 aa9.17□□□□□ -0.94
VPS29-209ENST00000551655 C5orf51A6NDU8 294 aa9.17□□□□□ -0.94
VPS29-209ENST00000551655 SSSCA1O60232 199 aa9.17□□□□□ -0.94
VPS29-209ENST00000551655 VAMP1P23763 118 aa9.17□□□□□ -0.94
VPS29-209ENST00000551655 KRTAP10-8P60410 259 aa9.17□□□□□ -0.94
VPS29-209ENST00000551655 MZT2AQ6P582 158 aa9.17□□□□□ -0.94
VPS29-209ENST00000551655 DPPA3Q6W0C5 159 aa9.17□□□□□ -0.94
VPS29-209ENST00000551655 UBE2WQ96B02 151 aa9.17□□□□□ -0.94
VPS29-209ENST00000551655 MIXL1Q9H2W2 232 aa9.17□□□□□ -0.94
VPS29-209ENST00000551655 TIMM9Q9Y5J7 89 aa9.17□□□□□ -0.94
VPS29-209ENST00000551655 A0A0J9YXV3 536 aa9.16□□□□□ -0.94
VPS29-209ENST00000551655 HIST1H1EP10412 219 aaKnown RBP9.16□□□□□ -0.94
VPS29-209ENST00000551655 ZNF138P52744 262 aa9.16□□□□□ -0.94
VPS29-209ENST00000551655 SSBP1Q04837 148 aaKnown RBP9.16□□□□□ -0.94
VPS29-209ENST00000551655 ZNF266Q14584 549 aa9.16□□□□□ -0.94
VPS29-209ENST00000551655 FFAR4Q5NUL3 377 aa9.16□□□□□ -0.94
VPS29-209ENST00000551655 MIC13Q5XKP0 118 aa9.16□□□□□ -0.94
VPS29-209ENST00000551655 FAM159AQ6UWV7 190 aa9.16□□□□□ -0.94
VPS29-209ENST00000551655 TMEM14EPQ6UXP3 125 aa9.16□□□□□ -0.94
VPS29-209ENST00000551655 HSD17B11Q8NBQ5 300 aa9.16□□□□□ -0.94
VPS29-209ENST00000551655 SMIM4Q8WVI0 70 aa9.16□□□□□ -0.94
VPS29-209ENST00000551655 MCUBQ9NWR8 336 aa9.16□□□□□ -0.94
VPS29-209ENST00000551655 PRELID1Q9Y255 219 aa9.16□□□□□ -0.94
VPS29-209ENST00000551655 TRBV6-4A0A1B0GX49 114 aa9.15□□□□□ -0.94
VPS29-209ENST00000551655 OR10J4P0C629 311 aa9.15□□□□□ -0.94
VPS29-209ENST00000551655 SCGB3A2Q96PL1 93 aa9.15□□□□□ -0.94
VPS29-209ENST00000551655 Q9UF83 564 aa9.15□□□□□ -0.94
VPS29-209ENST00000551655 SCP2D1Q9UJQ7 156 aa9.15□□□□□ -0.94
VPS29-209ENST00000551655 ANKRD20A5PA0PJZ0 165 aa9.14□□□□□ -0.95
VPS29-209ENST00000551655 GAGE12JA6NER3 117 aa9.14□□□□□ -0.95
VPS29-209ENST00000551655 FNDC10F2Z333 226 aa9.14□□□□□ -0.95
VPS29-209ENST00000551655 PHOX2AO14813 284 aa9.14□□□□□ -0.95
VPS29-209ENST00000551655 ID3Q02535 119 aa9.14□□□□□ -0.95
VPS29-209ENST00000551655 GAGE1Q13065 139 aa9.14□□□□□ -0.95
VPS29-209ENST00000551655 GAGE4Q13068 117 aa9.14□□□□□ -0.95
VPS29-209ENST00000551655 GAGE5Q13069 117 aa9.14□□□□□ -0.95
VPS29-209ENST00000551655 GAGE13Q4V321 117 aa9.14□□□□□ -0.95
VPS29-209ENST00000551655 CFAP126Q5VTH2 177 aa9.14□□□□□ -0.95
VPS29-209ENST00000551655 USP17L23D6RBM5 183 aa9.13□□□□□ -0.95
VPS29-209ENST00000551655 PRSS1P07477 247 aa9.13□□□□□ -0.95
VPS29-209ENST00000551655 CAV2P51636 162 aa9.13□□□□□ -0.95
VPS29-209ENST00000551655 C14orf177Q52M58 125 aa9.13□□□□□ -0.95
VPS29-209ENST00000551655 Q6AWC8 147 aa9.13□□□□□ -0.95
VPS29-209ENST00000551655 SDIM1Q6ZPB5 146 aa9.13□□□□□ -0.95
VPS29-209ENST00000551655 NIT1Q86X76 327 aa9.13□□□□□ -0.95
VPS29-209ENST00000551655 C9orf163Q8N9P6 203 aa9.13□□□□□ -0.95
VPS29-209ENST00000551655 C15orf40Q8WUR7 153 aa9.13□□□□□ -0.95
VPS29-209ENST00000551655 KIF25-AS1Q9Y6Z4 181 aa9.13□□□□□ -0.95
VPS29-209ENST00000551655 TYMSP04818 313 aa9.12□□□□□ -0.95
VPS29-209ENST00000551655 CAMLGP49069 296 aa9.12□□□□□ -0.95
VPS29-209ENST00000551655 TMEM128Q5BJH2 165 aa9.12□□□□□ -0.95
VPS29-209ENST00000551655 NRARPQ7Z6K4 114 aa9.12□□□□□ -0.95
VPS29-209ENST00000551655 ZC2HC1AQ96GY0 325 aa9.12□□□□□ -0.95
VPS29-209ENST00000551655 SMIM8Q96KF7 97 aa9.12□□□□□ -0.95
VPS29-209ENST00000551655 FUNDC2Q9BWH2 189 aa9.12□□□□□ -0.95
VPS29-209ENST00000551655 OR51M1Q9H341 326 aa9.12□□□□□ -0.95
VPS29-209ENST00000551655 AAMDCQ9H7C9 122 aa9.12□□□□□ -0.95
VPS29-209ENST00000551655 CHTF8P0CG12 524 aa9.11□□□□□ -0.95
VPS29-209ENST00000551655 LINC00694P0DN24 101 aa9.11□□□□□ -0.95
VPS29-209ENST00000551655 MRPS10P82664 201 aaKnown RBP9.11□□□□□ -0.95
VPS29-209ENST00000551655 PPP1R1AQ13522 171 aa9.11□□□□□ -0.95
VPS29-209ENST00000551655 WDR73Q6P4I2 378 aa9.11□□□□□ -0.95
VPS29-209ENST00000551655 ATRAIDQ6UW56 229 aa9.11□□□□□ -0.95
VPS29-209ENST00000551655 Q6ZRG5 221 aa9.11□□□□□ -0.95
VPS29-209ENST00000551655 C2orf50Q96LR7 162 aa9.11□□□□□ -0.95
VPS29-209ENST00000551655 TMEM14CQ9P0S9 112 aa9.11□□□□□ -0.95
VPS29-209ENST00000551655 URGCP-MRPS24S4R325 110 aa9.11□□□□□ -0.95
VPS29-209ENST00000551655 PIGBOS1A0A0B4J2F0 54 aa9.1□□□□□ -0.95
VPS29-209ENST00000551655 SFT2D2O95562 160 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms