RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 Q56UQ5 140 aa1.48□□□□□ -2.17
CPSF6-207ENST00000551516 SPINK9Q5DT21 86 aa1.48□□□□□ -2.17
CPSF6-207ENST00000551516 SOHLH1Q5JUK2 328 aa1.48□□□□□ -2.17
CPSF6-207ENST00000551516 TMEM69Q5SWH9 247 aa1.48□□□□□ -2.17
CPSF6-207ENST00000551516 LCE3CQ5T5A8 94 aa1.48□□□□□ -2.17
CPSF6-207ENST00000551516 SPATA31B1PQ5VZV4 182 aa1.48□□□□□ -2.17
CPSF6-207ENST00000551516 LYPD5Q6UWN5 251 aa1.48□□□□□ -2.17
CPSF6-207ENST00000551516 ZNF493Q6ZR52 646 aa1.48□□□□□ -2.17
CPSF6-207ENST00000551516 IQCF2Q8IXL9 164 aa1.48□□□□□ -2.17
CPSF6-207ENST00000551516 BAP18Q8IXM2 172 aa1.48□□□□□ -2.17
CPSF6-207ENST00000551516 CMTM1Q8IZ96 169 aa1.48□□□□□ -2.17
CPSF6-207ENST00000551516 SELENOHQ8IZQ5 122 aaKnown RBP1.48□□□□□ -2.17
CPSF6-207ENST00000551516 ARRDC1Q8N5I2 433 aa1.48□□□□□ -2.17
CPSF6-207ENST00000551516 ZNF555Q8NEP9 628 aa1.48□□□□□ -2.17
CPSF6-207ENST00000551516 OR51G1Q8NGK1 321 aa1.48□□□□□ -2.17
CPSF6-207ENST00000551516 RNASEH2CQ8TDP1 164 aaKnown RBP1.48□□□□□ -2.17
CPSF6-207ENST00000551516 TSC22D3Q99576 134 aa1.48□□□□□ -2.17
CPSF6-207ENST00000551516 TRGV9Q99603 122 aa1.48□□□□□ -2.17
CPSF6-207ENST00000551516 LINC00467Q9BRT7 94 aa1.48□□□□□ -2.17
CPSF6-207ENST00000551516 DCUN1D5Q9BTE7 237 aa1.48□□□□□ -2.17
CPSF6-207ENST00000551516 TMEM222Q9H0R3 208 aa1.48□□□□□ -2.17
CPSF6-207ENST00000551516 MIXL1Q9H2W2 232 aa1.48□□□□□ -2.17
CPSF6-207ENST00000551516 C11orf1Q9H5F2 150 aa1.48□□□□□ -2.17
CPSF6-207ENST00000551516 ANAPC11Q9NYG5 84 aa1.48□□□□□ -2.17
CPSF6-207ENST00000551516 FKBP11Q9NYL4 201 aa1.48□□□□□ -2.17
CPSF6-207ENST00000551516 CCDC59Q9P031 241 aaKnown RBP1.48□□□□□ -2.17
CPSF6-207ENST00000551516 ORC6Q9Y5N6 252 aa1.48□□□□□ -2.17
CPSF6-207ENST00000551516 TRAV12-2A0A075B6T6 113 aa1.47□□□□□ -2.17
CPSF6-207ENST00000551516 TRAV30A0A087WSZ9 112 aa1.47□□□□□ -2.17
CPSF6-207ENST00000551516 ZNF98A6NK75 572 aa1.47□□□□□ -2.17
CPSF6-207ENST00000551516 H3BRN7 92 aa1.47□□□□□ -2.17
CPSF6-207ENST00000551516 PANO1I0J062 215 aa1.47□□□□□ -2.17
CPSF6-207ENST00000551516 DNASE2O00115 360 aaPredicted RBP1.47□□□□□ -2.17
CPSF6-207ENST00000551516 PDCD5O14737 125 aa1.47□□□□□ -2.17
CPSF6-207ENST00000551516 SPINK4O60575 86 aa1.47□□□□□ -2.17
CPSF6-207ENST00000551516 YIF1AO95070 293 aa1.47□□□□□ -2.17
CPSF6-207ENST00000551516 OXTP01178 125 aa1.47□□□□□ -2.17
CPSF6-207ENST00000551516 IFNA10P01566 189 aa1.47□□□□□ -2.17
CPSF6-207ENST00000551516 IFNA21P01568 189 aa1.47□□□□□ -2.17
CPSF6-207ENST00000551516 IFNA17P01571 189 aa1.47□□□□□ -2.17
CPSF6-207ENST00000551516 CD3DP04234 171 aa1.47□□□□□ -2.17
CPSF6-207ENST00000551516 IL4P05112 153 aa1.47□□□□□ -2.17
CPSF6-207ENST00000551516 LINC00869P0C866 280 aa1.47□□□□□ -2.17
CPSF6-207ENST00000551516 RD3LP0DJH9 198 aa1.47□□□□□ -2.17
CPSF6-207ENST00000551516 IGLC2P0DOY2 106 aa1.47□□□□□ -2.17
CPSF6-207ENST00000551516 SLC25A4P12235 298 aa1.47□□□□□ -2.17
CPSF6-207ENST00000551516 GADD45AP24522 165 aa1.47□□□□□ -2.17
CPSF6-207ENST00000551516 NPY1RP25929 384 aa1.47□□□□□ -2.17
CPSF6-207ENST00000551516 PSMB9P28065 219 aa1.47□□□□□ -2.17
CPSF6-207ENST00000551516 HLA-DMAP28067 261 aa1.47□□□□□ -2.17
CPSF6-207ENST00000551516 OR10J1P30954 320 aa1.47□□□□□ -2.17
CPSF6-207ENST00000551516 HTR2BP41595 481 aa1.47□□□□□ -2.17
CPSF6-207ENST00000551516 CXCL5P42830 114 aa1.47□□□□□ -2.17
CPSF6-207ENST00000551516 CBX5P45973 191 aa1.47□□□□□ -2.17
CPSF6-207ENST00000551516 UBE2AP49459 152 aa1.47□□□□□ -2.17
CPSF6-207ENST00000551516 EIF2B2P49770 351 aaKnown RBP1.47□□□□□ -2.17
CPSF6-207ENST00000551516 AP2S1P53680 142 aaPredicted RBP1.47□□□□□ -2.17
CPSF6-207ENST00000551516 TAS2R60P59551 318 aa1.47□□□□□ -2.17
CPSF6-207ENST00000551516 FXYD4P59646 89 aa1.47□□□□□ -2.17
CPSF6-207ENST00000551516 KRTAP10-8P60410 259 aa1.47□□□□□ -2.17
CPSF6-207ENST00000551516 PAFAH1B2P68402 229 aa1.47□□□□□ -2.17
CPSF6-207ENST00000551516 CATR1Q13166 79 aa1.47□□□□□ -2.17
CPSF6-207ENST00000551516 IL15RAQ13261 267 aa1.47□□□□□ -2.17
CPSF6-207ENST00000551516 DHRS2Q13268 280 aa1.47□□□□□ -2.17
CPSF6-207ENST00000551516 CIRBPQ14011 172 aaKnown RBP1.47□□□□□ -2.17
CPSF6-207ENST00000551516 SPINK13Q1W4C9 94 aa1.47□□□□□ -2.17
CPSF6-207ENST00000551516 RRN3P1Q2M238 152 aa1.47□□□□□ -2.17
CPSF6-207ENST00000551516 PRR9Q5T870 116 aa1.47□□□□□ -2.17
CPSF6-207ENST00000551516 LPCAT3Q6P1A2 487 aa1.47□□□□□ -2.17
CPSF6-207ENST00000551516 KRTAP26-1Q6PEX3 210 aa1.47□□□□□ -2.17
CPSF6-207ENST00000551516 TEX43Q6ZNM6 134 aa1.47□□□□□ -2.17
CPSF6-207ENST00000551516 Q6ZTI0 123 aa1.47□□□□□ -2.17
CPSF6-207ENST00000551516 LINC00173Q6ZV60 143 aa1.47□□□□□ -2.17
CPSF6-207ENST00000551516 ZFAND2AQ8N6M9 145 aa1.47□□□□□ -2.17
CPSF6-207ENST00000551516 UBAC2Q8NBM4 344 aa1.47□□□□□ -2.17
CPSF6-207ENST00000551516 BPIFCQ8NFQ6 507 aa1.47□□□□□ -2.17
CPSF6-207ENST00000551516 LYPD6BQ8NI32 183 aa1.47□□□□□ -2.17
CPSF6-207ENST00000551516 ZNF431Q8TF32 576 aaPredicted RBP1.47□□□□□ -2.17
CPSF6-207ENST00000551516 RNF185Q96GF1 192 aa1.47□□□□□ -2.17
CPSF6-207ENST00000551516 METTL26Q96S19 204 aa1.47□□□□□ -2.17
CPSF6-207ENST00000551516 GINS3Q9BRX5 216 aa1.47□□□□□ -2.17
CPSF6-207ENST00000551516 C6orf62Q9GZU0 229 aaPredicted RBP1.47□□□□□ -2.17
CPSF6-207ENST00000551516 ZNF331Q9NQX6 463 aaPredicted RBP1.47□□□□□ -2.17
CPSF6-207ENST00000551516 ZNF586Q9NXT0 402 aa1.47□□□□□ -2.17
CPSF6-207ENST00000551516 DOK5Q9P104 306 aa1.47□□□□□ -2.17
CPSF6-207ENST00000551516 MTFP1Q9UDX5 166 aa1.47□□□□□ -2.17
CPSF6-207ENST00000551516 RABAC1Q9UI14 185 aa1.47□□□□□ -2.17
CPSF6-207ENST00000551516 C3orf85A0A1B0GTC6 90 aa1.46□□□□□ -2.18
CPSF6-207ENST00000551516 CRYM-AS1A6NIL9 109 aa1.46□□□□□ -2.18
CPSF6-207ENST00000551516 ANKRD65E5RJM6 399 aa1.46□□□□□ -2.18
CPSF6-207ENST00000551516 H3BQ15 152 aa1.46□□□□□ -2.18
CPSF6-207ENST00000551516 CORTO00230 105 aa1.46□□□□□ -2.18
CPSF6-207ENST00000551516 SLC17A3O00476 420 aa1.46□□□□□ -2.18
CPSF6-207ENST00000551516 TNFAIP8O95379 198 aa1.46□□□□□ -2.18
CPSF6-207ENST00000551516 HBE1P02100 147 aa1.46□□□□□ -2.18
CPSF6-207ENST00000551516 ATP5G1P05496 136 aa1.46□□□□□ -2.18
CPSF6-207ENST00000551516 OR5AC1P0C628 307 aa1.46□□□□□ -2.18
CPSF6-207ENST00000551516 STAG3L3P0CL85 134 aa1.46□□□□□ -2.18
CPSF6-207ENST00000551516 DEFB130BP0DP73 79 aa1.46□□□□□ -2.18
CPSF6-207ENST00000551516 DEFB130AP0DP74 79 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms