RNA–Protein interactions for RNA: ENST00000550891.4

SCN8A-206, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 3,253 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-206ENST00000550891 MUC21A0A0G2JKD1 596 aa11.78□□□□□ -0.52
SCN8A-206ENST00000550891 MUC21A0A140T8X8 626 aa11.78□□□□□ -0.52
SCN8A-206ENST00000550891 FLNAP21333 2647 aaKnown RBP11.78□□□□□ -0.52
SCN8A-206ENST00000550891 HOXD3P31249 432 aaPredicted RBP11.78□□□□□ -0.52
SCN8A-206ENST00000550891 SRSF2Q01130 221 aaKnown RBP11.78□□□□□ -0.52
SCN8A-206ENST00000550891 MUC21Q5SSG8 566 aa11.78□□□□□ -0.52
SCN8A-206ENST00000550891 GSN-AS1Q9NRJ2 163 aa11.78□□□□□ -0.52
SCN8A-206ENST00000550891 CD5LO43866 347 aa11.78□□□□□ -0.52
SCN8A-206ENST00000550891 Q8N2B8 174 aa11.78□□□□□ -0.52
SCN8A-206ENST00000550891 DNAJC9-AS1A6NH13 148 aa11.77□□□□□ -0.52
SCN8A-206ENST00000550891 LINC00310P59036 64 aa11.77□□□□□ -0.52
SCN8A-206ENST00000550891 KLF5Q13887 457 aaPredicted RBP11.77□□□□□ -0.52
SCN8A-206ENST00000550891 DNLZQ5SXM8 178 aa11.77□□□□□ -0.52
SCN8A-206ENST00000550891 TMEM213A2RRL7 107 aa11.77□□□□□ -0.53
SCN8A-206ENST00000550891 SOCS3O14543 225 aa11.77□□□□□ -0.53
SCN8A-206ENST00000550891 ZNF324O75467 553 aaPredicted RBP11.77□□□□□ -0.53
SCN8A-206ENST00000550891 SNRPD3P62318 126 aaKnown RBP11.77□□□□□ -0.53
SCN8A-206ENST00000550891 LINC01559Q495D7 138 aa11.77□□□□□ -0.53
SCN8A-206ENST00000550891 OR8A1Q8NGG7 326 aa11.77□□□□□ -0.53
SCN8A-206ENST00000550891 MYOZ3Q8TDC0 251 aa11.77□□□□□ -0.53
SCN8A-206ENST00000550891 PPP1R14DQ9NXH3 145 aa11.77□□□□□ -0.53
SCN8A-206ENST00000550891 GPX1P07203 203 aa11.76□□□□□ -0.53
SCN8A-206ENST00000550891 CDPF1Q6NVV7 123 aa11.76□□□□□ -0.53
SCN8A-206ENST00000550891 REC114Q7Z4M0 266 aa11.76□□□□□ -0.53
SCN8A-206ENST00000550891 NAGKQ9UJ70 344 aa11.76□□□□□ -0.53
SCN8A-206ENST00000550891 RNF152Q8N8N0 203 aa11.76□□□□□ -0.53
SCN8A-206ENST00000550891 LGALS9O00182 355 aa11.75□□□□□ -0.53
SCN8A-206ENST00000550891 EDN2P20800 178 aa11.75□□□□□ -0.53
SCN8A-206ENST00000550891 CTRLP40313 264 aa11.75□□□□□ -0.53
SCN8A-206ENST00000550891 KRTDAPP60985 99 aa11.75□□□□□ -0.53
SCN8A-206ENST00000550891 TSTD3H0UI37 97 aa11.75□□□□□ -0.53
SCN8A-206ENST00000550891 FAM19A2Q8N3H0 131 aa11.75□□□□□ -0.53
SCN8A-206ENST00000550891 F6UB75 175 aa11.74□□□□□ -0.53
SCN8A-206ENST00000550891 M0R2Z0 102 aa11.74□□□□□ -0.53
SCN8A-206ENST00000550891 MS4A6AQ9H2W1 248 aa11.74□□□□□ -0.53
SCN8A-206ENST00000550891 ZFHX3Q15911 3703 aa11.74□□□□□ -0.53
SCN8A-206ENST00000550891 TRAV21A0A0B4J279 112 aa11.74□□□□□ -0.53
SCN8A-206ENST00000550891 DEFB136Q30KP8 78 aa11.74□□□□□ -0.53
SCN8A-206ENST00000550891 SMIM15Q7Z3B0 74 aa11.74□□□□□ -0.53
SCN8A-206ENST00000550891 MXRA5Q9NR99 2828 aa11.74□□□□□ -0.53
SCN8A-206ENST00000550891 ZNF688P0C7X2 276 aa11.73□□□□□ -0.53
SCN8A-206ENST00000550891 IGLC6P0CF74 106 aa11.73□□□□□ -0.53
SCN8A-206ENST00000550891 DEFB1P60022 68 aa11.73□□□□□ -0.53
SCN8A-206ENST00000550891 NIT1Q86X76 327 aa11.73□□□□□ -0.53
SCN8A-206ENST00000550891 LINC01619G3V211 115 aa11.73□□□□□ -0.53
SCN8A-206ENST00000550891 CSN3P07498 182 aa11.73□□□□□ -0.53
SCN8A-206ENST00000550891 Q6ZSV7 163 aa11.73□□□□□ -0.53
SCN8A-206ENST00000550891 Q6ZWC4 215 aa11.73□□□□□ -0.53
SCN8A-206ENST00000550891 KLHL30-AS1Q8NEE0 82 aa11.73□□□□□ -0.53
SCN8A-206ENST00000550891 OR11H1Q8NG94 326 aa11.73□□□□□ -0.53
SCN8A-206ENST00000550891 S100A4P26447 101 aaKnown RBP11.73□□□□□ -0.53
SCN8A-206ENST00000550891 PSMG4Q5JS54 123 aa11.73□□□□□ -0.53
SCN8A-206ENST00000550891 PEMTQ9UBM1 199 aa11.73□□□□□ -0.53
SCN8A-206ENST00000550891 C2orf70A6NJV1 201 aa11.72□□□□□ -0.53
SCN8A-206ENST00000550891 ZNF493Q6ZR52 646 aa11.72□□□□□ -0.53
SCN8A-206ENST00000550891 DCANP1Q8TF63 244 aa11.72□□□□□ -0.53
SCN8A-206ENST00000550891 ACANP16112 2415 aa11.72□□□□□ -0.53
SCN8A-206ENST00000550891 IGKV3D-20A0A0C4DH25 116 aa11.72□□□□□ -0.53
SCN8A-206ENST00000550891 SLURP1P55000 103 aa11.72□□□□□ -0.53
SCN8A-206ENST00000550891 AMN1Q8IY45 258 aa11.72□□□□□ -0.53
SCN8A-206ENST00000550891 ZNF418Q8TF45 676 aaPredicted RBP11.72□□□□□ -0.53
SCN8A-206ENST00000550891 C4orf3Q8WVX3 66 aa11.72□□□□□ -0.53
SCN8A-206ENST00000550891 UNC79Q9P2D8 2635 aa11.72□□□□□ -0.53
SCN8A-206ENST00000550891 CD33P20138 364 aa11.71□□□□□ -0.53
SCN8A-206ENST00000550891 RNASE4P34096 147 aaKnown RBP11.71□□□□□ -0.53
SCN8A-206ENST00000550891 TCTEX1D4Q5JR98 221 aa11.71□□□□□ -0.53
SCN8A-206ENST00000550891 FAM104BQ5XKR9 115 aa11.71□□□□□ -0.53
SCN8A-206ENST00000550891 EBLN2Q6P2I7 272 aa11.71□□□□□ -0.53
SCN8A-206ENST00000550891 GATD1Q8NB37 220 aa11.71□□□□□ -0.53
SCN8A-206ENST00000550891 CHCHD1Q96BP2 118 aaKnown RBP11.71□□□□□ -0.53
SCN8A-206ENST00000550891 TIMM8BQ9Y5J9 83 aaPredicted RBP11.71□□□□□ -0.53
SCN8A-206ENST00000550891 LINC00614P0C842 121 aa11.71□□□□□ -0.53
SCN8A-206ENST00000550891 SPANXN1Q5VSR9 72 aa11.71□□□□□ -0.53
SCN8A-206ENST00000550891 ORMDL3Q8N138 153 aa11.71□□□□□ -0.53
SCN8A-206ENST00000550891 OR1N2Q8NGR9 330 aa11.71□□□□□ -0.53
SCN8A-206ENST00000550891 PRSS3P2Q8NHM4 247 aa11.71□□□□□ -0.53
SCN8A-206ENST00000550891 CKS2P33552 79 aa11.7□□□□□ -0.54
SCN8A-206ENST00000550891 PKIAP61925 76 aa11.7□□□□□ -0.54
SCN8A-206ENST00000550891 FA2HQ7L5A8 372 aa11.7□□□□□ -0.54
SCN8A-206ENST00000550891 C18orf65Q6ZTR6 163 aa11.7□□□□□ -0.54
SCN8A-206ENST00000550891 ZFAND2AQ8N6M9 145 aa11.7□□□□□ -0.54
SCN8A-206ENST00000550891 C11orf21Q9P2W6 132 aa11.7□□□□□ -0.54
SCN8A-206ENST00000550891 TRBV7-9A0A0J9YWB2 115 aa11.7□□□□□ -0.54
SCN8A-206ENST00000550891 D6R8Y8 96 aa11.7□□□□□ -0.54
SCN8A-206ENST00000550891 PRELID3AQ96N28 172 aa11.7□□□□□ -0.54
SCN8A-206ENST00000550891 PRO1933Q9H354 126 aa11.7□□□□□ -0.54
SCN8A-206ENST00000550891 KRTAP1-1Q07627 177 aa11.69□□□□□ -0.54
SCN8A-206ENST00000550891 DYNLRB2Q8TF09 96 aa11.69□□□□□ -0.54
SCN8A-206ENST00000550891 TMEM191AQ9H0A3 160 aa11.69□□□□□ -0.54
SCN8A-206ENST00000550891 NOTCH2Q04721 2471 aa11.69□□□□□ -0.54
SCN8A-206ENST00000550891 ITPR2Q14571 2701 aa11.69□□□□□ -0.54
SCN8A-206ENST00000550891 PRR9Q5T870 116 aa11.69□□□□□ -0.54
SCN8A-206ENST00000550891 DUX3Q96PT4 197 aa11.69□□□□□ -0.54
SCN8A-206ENST00000550891 C11orf44Q8N8P7 122 aa11.68□□□□□ -0.54
SCN8A-206ENST00000550891 ESM1Q9NQ30 184 aa11.68□□□□□ -0.54
SCN8A-206ENST00000550891 H3BVH4 76 aa11.68□□□□□ -0.54
SCN8A-206ENST00000550891 ASIPP42127 132 aa11.68□□□□□ -0.54
SCN8A-206ENST00000550891 CNFNQ9BYD5 112 aa11.68□□□□□ -0.54
SCN8A-206ENST00000550891 FASNP49327 2511 aaKnown RBP11.68□□□□□ -0.54
SCN8A-206ENST00000550891 K7EQG2 157 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms