RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 CDK6Q00534 326 aa2.3□□□□□ -2.04
LIMA1-205ENST00000550592 CAV1Q03135 178 aa2.3□□□□□ -2.04
LIMA1-205ENST00000550592 HMGN3Q15651 99 aa2.3□□□□□ -2.04
LIMA1-205ENST00000550592 LGALSLQ3ZCW2 172 aaPredicted RBP2.3□□□□□ -2.04
LIMA1-205ENST00000550592 TMEM128Q5BJH2 165 aa2.3□□□□□ -2.04
LIMA1-205ENST00000550592 MESTQ5EB52 335 aa2.3□□□□□ -2.04
LIMA1-205ENST00000550592 FAM74A1Q5RGS3 127 aa2.3□□□□□ -2.04
LIMA1-205ENST00000550592 FAM78BQ5VT40 261 aa2.3□□□□□ -2.04
LIMA1-205ENST00000550592 LAIR2Q6ISS4 152 aa2.3□□□□□ -2.04
LIMA1-205ENST00000550592 HCP5Q6MZN7 132 aa2.3□□□□□ -2.04
LIMA1-205ENST00000550592 DRAM2Q6UX65 266 aa2.3□□□□□ -2.04
LIMA1-205ENST00000550592 LYZL2Q7Z4W2 148 aa2.3□□□□□ -2.04
LIMA1-205ENST00000550592 LY6G5BQ8NDX9 201 aa2.3□□□□□ -2.04
LIMA1-205ENST00000550592 OR4P4Q8NGL7 312 aa2.3□□□□□ -2.04
LIMA1-205ENST00000550592 OR10D4PQ8NGN7 298 aa2.3□□□□□ -2.04
LIMA1-205ENST00000550592 GNPDA2Q8TDQ7 276 aa2.3□□□□□ -2.04
LIMA1-205ENST00000550592 GPR119Q8TDV5 335 aa2.3□□□□□ -2.04
LIMA1-205ENST00000550592 DDIT4LQ96D03 193 aa2.3□□□□□ -2.04
LIMA1-205ENST00000550592 SNHG12Q9BXW3 62 aa2.3□□□□□ -2.04
LIMA1-205ENST00000550592 LINC00470Q9BZP3 86 aa2.3□□□□□ -2.04
LIMA1-205ENST00000550592 CHST5Q9GZS9 411 aa2.3□□□□□ -2.04
LIMA1-205ENST00000550592 UBQLN4Q9NRR5 601 aa2.3□□□□□ -2.04
LIMA1-205ENST00000550592 COMMD3Q9UBI1 195 aa2.3□□□□□ -2.04
LIMA1-205ENST00000550592 HHLA2Q9UM44 414 aa2.3□□□□□ -2.04
LIMA1-205ENST00000550592 CARHSP1Q9Y2V2 147 aaKnown RBP2.3□□□□□ -2.04
LIMA1-205ENST00000550592 UFC1Q9Y3C8 167 aa2.3□□□□□ -2.04
LIMA1-205ENST00000550592 HDGFL3Q9Y3E1 203 aa2.3□□□□□ -2.04
LIMA1-205ENST00000550592 MYCBP2O75592 4640 aa2.29□□□□□ -2.04
LIMA1-205ENST00000550592 APOBP04114 4563 aaKnown RBP2.29□□□□□ -2.04
LIMA1-205ENST00000550592 IGKV1D-37A0A075B6S9 117 aa2.29□□□□□ -2.04
LIMA1-205ENST00000550592 A0A1B0GU33 70 aa2.29□□□□□ -2.04
LIMA1-205ENST00000550592 A0A1W2PQD3 144 aa2.29□□□□□ -2.04
LIMA1-205ENST00000550592 IGSF23A1L1A6 192 aa2.29□□□□□ -2.04
LIMA1-205ENST00000550592 OR6C6A6NF89 314 aa2.29□□□□□ -2.04
LIMA1-205ENST00000550592 H3BSH0 61 aa2.29□□□□□ -2.04
LIMA1-205ENST00000550592 J3QR89 54 aa2.29□□□□□ -2.04
LIMA1-205ENST00000550592 APOC4-APOC2K7ER74 178 aa2.29□□□□□ -2.04
LIMA1-205ENST00000550592 CORTO00230 105 aa2.29□□□□□ -2.04
LIMA1-205ENST00000550592 GPR31O00270 319 aa2.29□□□□□ -2.04
LIMA1-205ENST00000550592 FGF16O43320 207 aa2.29□□□□□ -2.04
LIMA1-205ENST00000550592 OR2T1O43869 369 aa2.29□□□□□ -2.04
LIMA1-205ENST00000550592 S1PR2O95136 353 aa2.29□□□□□ -2.04
LIMA1-205ENST00000550592 SOX14O95416 240 aa2.29□□□□□ -2.04
LIMA1-205ENST00000550592 IFNA1P01562 189 aa2.29□□□□□ -2.04
LIMA1-205ENST00000550592 APOC2P02655 101 aa2.29□□□□□ -2.04
LIMA1-205ENST00000550592 ISG15P05161 165 aa2.29□□□□□ -2.04
LIMA1-205ENST00000550592 LIMS3P0CW19 117 aa2.29□□□□□ -2.04
LIMA1-205ENST00000550592 LIMS4P0CW20 117 aa2.29□□□□□ -2.04
LIMA1-205ENST00000550592 CTLA4P16410 223 aa2.29□□□□□ -2.04
LIMA1-205ENST00000550592 PSMA1P25786 263 aaKnown RBP2.29□□□□□ -2.04
LIMA1-205ENST00000550592 GABRA3P34903 492 aa2.29□□□□□ -2.04
LIMA1-205ENST00000550592 GABARAPL2P60520 117 aa2.29□□□□□ -2.04
LIMA1-205ENST00000550592 SELENOWP63302 87 aa2.29□□□□□ -2.04
LIMA1-205ENST00000550592 H3F3AP84243 136 aa2.29□□□□□ -2.04
LIMA1-205ENST00000550592 MEF2BQ02080 365 aaPredicted RBP2.29□□□□□ -2.04
LIMA1-205ENST00000550592 SPRNQ5BIV9 151 aa2.29□□□□□ -2.04
LIMA1-205ENST00000550592 PYY3Q5JQD4 70 aa2.29□□□□□ -2.04
LIMA1-205ENST00000550592 SLC48A1Q6P1K1 146 aa2.29□□□□□ -2.04
LIMA1-205ENST00000550592 ZNF705AQ6ZN79 300 aaPredicted RBP2.29□□□□□ -2.04
LIMA1-205ENST00000550592 SLC36A1Q7Z2H8 476 aa2.29□□□□□ -2.04
LIMA1-205ENST00000550592 OR6V1Q8N148 313 aa2.29□□□□□ -2.04
LIMA1-205ENST00000550592 FER1L6-AS1Q8NA97 138 aa2.29□□□□□ -2.04
LIMA1-205ENST00000550592 Q8NAQ8 132 aa2.29□□□□□ -2.04
LIMA1-205ENST00000550592 LFNGQ8NES3 379 aa2.29□□□□□ -2.04
LIMA1-205ENST00000550592 OR2T4Q8NH00 348 aa2.29□□□□□ -2.04
LIMA1-205ENST00000550592 MRPS24Q96EL2 167 aaKnown RBP2.29□□□□□ -2.04
LIMA1-205ENST00000550592 BTF3L4Q96K17 158 aa2.29□□□□□ -2.04
LIMA1-205ENST00000550592 RBP7Q96R05 134 aa2.29□□□□□ -2.04
LIMA1-205ENST00000550592 OR7D2Q96RA2 312 aa2.29□□□□□ -2.04
LIMA1-205ENST00000550592 TBX5Q99593 518 aa2.29□□□□□ -2.04
LIMA1-205ENST00000550592 PRSS27Q9BQR3 290 aa2.29□□□□□ -2.04
LIMA1-205ENST00000550592 CST9LQ9H4G1 147 aa2.29□□□□□ -2.04
LIMA1-205ENST00000550592 SPANXCQ9NY87 97 aa2.29□□□□□ -2.04
LIMA1-205ENST00000550592 SLC35A3Q9Y2D2 325 aa2.29□□□□□ -2.04
LIMA1-205ENST00000550592 TMEM269A0A1B0GVZ9 245 aa2.28□□□□□ -2.04
LIMA1-205ENST00000550592 M0R2N4 97 aa2.28□□□□□ -2.04
LIMA1-205ENST00000550592 CCL25O15444 150 aa2.28□□□□□ -2.04
LIMA1-205ENST00000550592 PSCAO43653 123 aa2.28□□□□□ -2.04
LIMA1-205ENST00000550592 GNG7O60262 68 aa2.28□□□□□ -2.04
LIMA1-205ENST00000550592 UBL3O95164 117 aa2.28□□□□□ -2.04
LIMA1-205ENST00000550592 CDS2O95674 445 aa2.28□□□□□ -2.04
LIMA1-205ENST00000550592 PMP2P02689 132 aa2.28□□□□□ -2.04
LIMA1-205ENST00000550592 CSN2P05814 226 aa2.28□□□□□ -2.04
LIMA1-205ENST00000550592 OR13C7P0DN81 318 aa2.28□□□□□ -2.04
LIMA1-205ENST00000550592 BRS3P32247 399 aa2.28□□□□□ -2.04
LIMA1-205ENST00000550592 ASIPP42127 132 aa2.28□□□□□ -2.04
LIMA1-205ENST00000550592 NDUFA6P56556 154 aa2.28□□□□□ -2.04
LIMA1-205ENST00000550592 ZNF117Q03924 483 aa2.28□□□□□ -2.04
LIMA1-205ENST00000550592 JOSD1Q15040 202 aaPredicted RBP2.28□□□□□ -2.04
LIMA1-205ENST00000550592 LTC4SQ16873 150 aa2.28□□□□□ -2.04
LIMA1-205ENST00000550592 IQCJQ1A5X6 159 aa2.28□□□□□ -2.04
LIMA1-205ENST00000550592 TBC1D28Q2M2D7 210 aa2.28□□□□□ -2.04
LIMA1-205ENST00000550592 LGALS9BQ3B8N2 356 aa2.28□□□□□ -2.04
LIMA1-205ENST00000550592 C10orf99Q6UWK7 81 aa2.28□□□□□ -2.04
LIMA1-205ENST00000550592 GTF2H5Q6ZYL4 71 aa2.28□□□□□ -2.04
LIMA1-205ENST00000550592 FAM19A3Q7Z5A8 133 aa2.28□□□□□ -2.04
LIMA1-205ENST00000550592 NIT1Q86X76 327 aa2.28□□□□□ -2.04
LIMA1-205ENST00000550592 KRTCAP2Q8N6L1 136 aa2.28□□□□□ -2.04
LIMA1-205ENST00000550592 TCTEX1D1Q8N7M0 179 aa2.28□□□□□ -2.04
LIMA1-205ENST00000550592 ZNF439Q8NDP4 499 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms