RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 Q9H3A6 140 aa7.55□□□□□ -1.2
VTI1BP3-201ENST00000550220 MRPS16Q9Y3D3 137 aaKnown RBP7.55□□□□□ -1.2
VTI1BP3-201ENST00000550220 KLF12Q9Y4X4 402 aa7.55□□□□□ -1.2
VTI1BP3-201ENST00000550220 ZNF415Q09FC8 603 aa7.54□□□□□ -1.2
VTI1BP3-201ENST00000550220 ACOT6Q3I5F7 207 aaPredicted RBP7.54□□□□□ -1.2
VTI1BP3-201ENST00000550220 PQLC2Q6ZP29 291 aa7.54□□□□□ -1.2
VTI1BP3-201ENST00000550220 CMTM2Q8TAZ6 248 aa7.54□□□□□ -1.2
VTI1BP3-201ENST00000550220 PHYHIPLQ96FC7 376 aa7.54□□□□□ -1.2
VTI1BP3-201ENST00000550220 OTORQ9NRC9 128 aa7.54□□□□□ -1.2
VTI1BP3-201ENST00000550220 PRO0255Q9UI72 69 aa7.54□□□□□ -1.2
VTI1BP3-201ENST00000550220 PKHD1P08F94 4074 aa7.54□□□□□ -1.2
VTI1BP3-201ENST00000550220 NACAE9PAV3 2078 aa7.53□□□□□ -1.2
VTI1BP3-201ENST00000550220 TRGV11A0A075B6L2 103 aa7.53□□□□□ -1.2
VTI1BP3-201ENST00000550220 A0A1W2PPV4 95 aa7.53□□□□□ -1.2
VTI1BP3-201ENST00000550220 DIRC3C9JPN6 131 aa7.53□□□□□ -1.2
VTI1BP3-201ENST00000550220 PAX4O43316 350 aa7.53□□□□□ -1.2
VTI1BP3-201ENST00000550220 TNP2Q05952 138 aa7.53□□□□□ -1.2
VTI1BP3-201ENST00000550220 Q6AWC8 147 aa7.53□□□□□ -1.2
VTI1BP3-201ENST00000550220 VSIG2Q96IQ7 327 aa7.53□□□□□ -1.2
VTI1BP3-201ENST00000550220 SPXQ9BT56 116 aa7.53□□□□□ -1.2
VTI1BP3-201ENST00000550220 BATF3Q9NR55 127 aa7.53□□□□□ -1.2
VTI1BP3-201ENST00000550220 TP53TG3Q9ULZ0 132 aa7.53□□□□□ -1.2
VTI1BP3-201ENST00000550220 HHLA3Q9XRX5 114 aa7.53□□□□□ -1.2
VTI1BP3-201ENST00000550220 ICOSQ9Y6W8 199 aa7.53□□□□□ -1.2
VTI1BP3-201ENST00000550220 DNAH11Q96DT5 4516 aa7.52□□□□□ -1.21
VTI1BP3-201ENST00000550220 A0A096LPF7 62 aa7.52□□□□□ -1.21
VTI1BP3-201ENST00000550220 C16orf90A8MZG2 172 aa7.52□□□□□ -1.21
VTI1BP3-201ENST00000550220 MRPL23Q16540 153 aaKnown RBP7.52□□□□□ -1.21
VTI1BP3-201ENST00000550220 FAM159AQ6UWV7 190 aa7.52□□□□□ -1.21
VTI1BP3-201ENST00000550220 IQCF2Q8IXL9 164 aa7.52□□□□□ -1.21
VTI1BP3-201ENST00000550220 RASL10AQ92737 203 aa7.52□□□□□ -1.21
VTI1BP3-201ENST00000550220 KRTAP17-1Q9BYP8 105 aa7.52□□□□□ -1.21
VTI1BP3-201ENST00000550220 MBD2Q9UBB5 411 aa7.52□□□□□ -1.21
VTI1BP3-201ENST00000550220 KIAA1109Q2LD37 5005 aa7.52□□□□□ -1.21
VTI1BP3-201ENST00000550220 SERTM2A0A1B0GWG4 89 aa7.51□□□□□ -1.21
VTI1BP3-201ENST00000550220 PGPA6NDG6 321 aa7.51□□□□□ -1.21
VTI1BP3-201ENST00000550220 K7EP13 123 aa7.51□□□□□ -1.21
VTI1BP3-201ENST00000550220 SIVA1O15304 175 aa7.51□□□□□ -1.21
VTI1BP3-201ENST00000550220 PRR9Q5T870 116 aa7.51□□□□□ -1.21
VTI1BP3-201ENST00000550220 ZNF575Q86XF7 245 aa7.51□□□□□ -1.21
VTI1BP3-201ENST00000550220 SMIM3Q9BZL3 60 aa7.51□□□□□ -1.21
VTI1BP3-201ENST00000550220 TRAV9-2A0A087WT02 112 aa7.5□□□□□ -1.21
VTI1BP3-201ENST00000550220 CDK2AP2O75956 126 aa7.5□□□□□ -1.21
VTI1BP3-201ENST00000550220 MBP02144 154 aa7.5□□□□□ -1.21
VTI1BP3-201ENST00000550220 ORM1P02763 201 aa7.5□□□□□ -1.21
VTI1BP3-201ENST00000550220 CRYBA4P53673 196 aa7.5□□□□□ -1.21
VTI1BP3-201ENST00000550220 TDRG1Q3Y452 100 aa7.5□□□□□ -1.21
VTI1BP3-201ENST00000550220 NEGR1Q7Z3B1 354 aa7.5□□□□□ -1.21
VTI1BP3-201ENST00000550220 Q8TAT8 98 aa7.5□□□□□ -1.21
VTI1BP3-201ENST00000550220 PCNPQ8WW12 178 aaKnown RBP7.5□□□□□ -1.21
VTI1BP3-201ENST00000550220 HYLS1Q96M11 299 aa7.5□□□□□ -1.21
VTI1BP3-201ENST00000550220 MRPL16Q9NX20 251 aaKnown RBP7.5□□□□□ -1.21
VTI1BP3-201ENST00000550220 TRAV21A0A0B4J279 112 aa7.49□□□□□ -1.21
VTI1BP3-201ENST00000550220 TRGV4A0A0C4DH28 118 aa7.49□□□□□ -1.21
VTI1BP3-201ENST00000550220 K7EQM0 130 aa7.49□□□□□ -1.21
VTI1BP3-201ENST00000550220 FHL2Q14192 279 aa7.49□□□□□ -1.21
VTI1BP3-201ENST00000550220 MUC21Q5SSG8 566 aa7.49□□□□□ -1.21
VTI1BP3-201ENST00000550220 SH2D6Q7Z4S9 175 aa7.49□□□□□ -1.21
VTI1BP3-201ENST00000550220 OR10G4Q8NGN3 311 aa7.49□□□□□ -1.21
VTI1BP3-201ENST00000550220 OR10G9Q8NGN4 311 aa7.49□□□□□ -1.21
VTI1BP3-201ENST00000550220 OR10G7Q8NGN6 311 aa7.49□□□□□ -1.21
VTI1BP3-201ENST00000550220 ASB13Q8WXK3 278 aa7.49□□□□□ -1.21
VTI1BP3-201ENST00000550220 KCNS1Q96KK3 526 aa7.49□□□□□ -1.21
VTI1BP3-201ENST00000550220 NDFIP1Q9BT67 221 aa7.49□□□□□ -1.21
VTI1BP3-201ENST00000550220 MDFICQ9P1T7 246 aa7.49□□□□□ -1.21
VTI1BP3-201ENST00000550220 M0R2P5 195 aa7.48□□□□□ -1.21
VTI1BP3-201ENST00000550220 EREGO14944 169 aa7.48□□□□□ -1.21
VTI1BP3-201ENST00000550220 CIDEAO60543 219 aa7.48□□□□□ -1.21
VTI1BP3-201ENST00000550220 NXPH4O95158 308 aa7.48□□□□□ -1.21
VTI1BP3-201ENST00000550220 IGHV3-53P01767 116 aa7.48□□□□□ -1.21
VTI1BP3-201ENST00000550220 SRIP30626 198 aa7.48□□□□□ -1.21
VTI1BP3-201ENST00000550220 SERF2P84101 59 aa7.48□□□□□ -1.21
VTI1BP3-201ENST00000550220 TMEM183BQ1AE95 376 aa7.48□□□□□ -1.21
VTI1BP3-201ENST00000550220 LYPD5Q6UWN5 251 aa7.48□□□□□ -1.21
VTI1BP3-201ENST00000550220 NFE4Q86UQ8 179 aa7.48□□□□□ -1.21
VTI1BP3-201ENST00000550220 TMEM183AQ8IXX5 376 aa7.48□□□□□ -1.21
VTI1BP3-201ENST00000550220 OR2G3Q8NGZ4 309 aa7.48□□□□□ -1.21
VTI1BP3-201ENST00000550220 C8orf49Q96NF6 230 aa7.48□□□□□ -1.21
VTI1BP3-201ENST00000550220 MUC4Q99102 2169 aa7.48□□□□□ -1.21
VTI1BP3-201ENST00000550220 PSMG3Q9BT73 122 aaPredicted RBP7.48□□□□□ -1.21
VTI1BP3-201ENST00000550220 WFDC1Q9HC57 220 aa7.48□□□□□ -1.21
VTI1BP3-201ENST00000550220 SDF2L1Q9HCN8 221 aa7.48□□□□□ -1.21
VTI1BP3-201ENST00000550220 TREM1Q9NP99 234 aa7.48□□□□□ -1.21
VTI1BP3-201ENST00000550220 PKD1P98161 4303 aa7.48□□□□□ -1.21
VTI1BP3-201ENST00000550220 TRAV4A0A0B4J268 109 aa7.47□□□□□ -1.21
VTI1BP3-201ENST00000550220 FBLL1A6NHQ2 334 aaKnown RBP7.47□□□□□ -1.21
VTI1BP3-201ENST00000550220 C9JCJ5 164 aa7.47□□□□□ -1.21
VTI1BP3-201ENST00000550220 PTTG1O95997 202 aa7.47□□□□□ -1.21
VTI1BP3-201ENST00000550220 CDC34P49427 236 aaPredicted RBP7.47□□□□□ -1.21
VTI1BP3-201ENST00000550220 RAB2AP61019 212 aa7.47□□□□□ -1.21
VTI1BP3-201ENST00000550220 Q6ZQT7 251 aa7.47□□□□□ -1.21
VTI1BP3-201ENST00000550220 GOLT1AQ6ZVE7 132 aa7.47□□□□□ -1.21
VTI1BP3-201ENST00000550220 SPATA12Q7Z6I5 190 aa7.47□□□□□ -1.21
VTI1BP3-201ENST00000550220 OR4C5Q8NGB2 326 aa7.47□□□□□ -1.21
VTI1BP3-201ENST00000550220 TXNDC17Q9BRA2 123 aa7.47□□□□□ -1.21
VTI1BP3-201ENST00000550220 KRTAP1-5Q9BYS1 174 aa7.47□□□□□ -1.21
VTI1BP3-201ENST00000550220 MED28Q9H204 178 aa7.47□□□□□ -1.21
VTI1BP3-201ENST00000550220 TMEM167BQ9NRX6 74 aa7.47□□□□□ -1.21
VTI1BP3-201ENST00000550220 ALG5Q9Y673 324 aa7.47□□□□□ -1.21
VTI1BP3-201ENST00000550220 DYNC1H1Q14204 4646 aaKnown RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms